Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 MIR7111-201ENST00000619751 72 ntBASIC0.36□□□□□ -2.35
PNLDC1Q8NA58 SNORD114-23-201ENST00000363536 72 ntBASIC0.35□□□□□ -2.35
PNLDC1Q8NA58 AC108740.1-201ENST00000498629 225 ntBASIC0.35□□□□□ -2.35
PNLDC1Q8NA58 PVT1_3.1-201ENST00000620853 95 ntBASIC0.35□□□□□ -2.35
PNLDC1Q8NA58 RNA5SP62-201ENST00000363457 110 ntBASIC0.34□□□□□ -2.36
PNLDC1Q8NA58 RNU6-127P-201ENST00000390897 107 ntBASIC0.34□□□□□ -2.36
PNLDC1Q8NA58 RNU6-70P-201ENST00000516438 60 ntBASIC0.34□□□□□ -2.36
PNLDC1Q8NA58 RNU6-687P-201ENST00000516443 89 ntBASIC0.34□□□□□ -2.36
PNLDC1Q8NA58 AC069113.3-201ENST00000521019 150 ntBASIC0.34□□□□□ -2.36
PNLDC1Q8NA58 MIR4662A-201ENST00000637499 67 ntBASIC0.34□□□□□ -2.36
PNLDC1Q8NA58 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
PNLDC1Q8NA58 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
PNLDC1Q8NA58 SNORA9.1-201ENST00000362412 131 ntBASIC0.33□□□□□ -2.36
PNLDC1Q8NA58 SNORA2.1-201ENST00000363089 137 ntBASIC0.33□□□□□ -2.36
PNLDC1Q8NA58 RNU6-1327P-201ENST00000365302 105 ntBASIC0.33□□□□□ -2.36
PNLDC1Q8NA58 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
PNLDC1Q8NA58 MIR876-201ENST00000401147 81 ntBASIC0.33□□□□□ -2.36
PNLDC1Q8NA58 AC073261.1-201ENST00000429409 121 ntBASIC0.33□□□□□ -2.36
PNLDC1Q8NA58 RNU7-129P-201ENST00000516128 62 ntBASIC0.33□□□□□ -2.36
PNLDC1Q8NA58 Y_RNA.681-201ENST00000516445 113 ntBASIC0.33□□□□□ -2.36
PNLDC1Q8NA58 RNU6-175P-201ENST00000516896 107 ntBASIC0.33□□□□□ -2.36
PNLDC1Q8NA58 RNU7-188P-201ENST00000517063 64 ntBASIC0.33□□□□□ -2.36
PNLDC1Q8NA58 RN7SL793P-201ENST00000583259 296 ntBASIC0.33□□□□□ -2.36
PNLDC1Q8NA58 VTRNA1-3-201ENST00000365645 89 ntBASIC0.32□□□□□ -2.36
PNLDC1Q8NA58 MIR7-2-201ENST00000384970 110 ntBASIC0.32□□□□□ -2.36
PNLDC1Q8NA58 RNA5SP193-201ENST00000410353 107 ntBASIC0.32□□□□□ -2.36
PNLDC1Q8NA58 Y_RNA.633-201ENST00000459107 95 ntBASIC0.32□□□□□ -2.36
PNLDC1Q8NA58 RNU6-411P-201ENST00000384451 107 ntBASIC0.31□□□□□ -2.36
PNLDC1Q8NA58 RNU6-1241P-201ENST00000384536 107 ntBASIC0.31□□□□□ -2.36
PNLDC1Q8NA58 AC244090.1-201ENST00000441884 93 ntBASIC0.31□□□□□ -2.36
PNLDC1Q8NA58 RNU6-1015P-201ENST00000517121 99 ntBASIC0.31□□□□□ -2.36
PNLDC1Q8NA58 RN7SL660P-201ENST00000614852 299 ntBASIC0.31□□□□□ -2.36
PNLDC1Q8NA58 AC010487.4-201ENST00000637027 61 ntBASIC0.31□□□□□ -2.36
PNLDC1Q8NA58 MIR20A-201ENST00000362279 71 ntBASIC0.3□□□□□ -2.36
PNLDC1Q8NA58 SNORD45.1-201ENST00000363181 77 ntBASIC0.3□□□□□ -2.36
PNLDC1Q8NA58 SNORD115-22-201ENST00000364456 82 ntBASIC0.3□□□□□ -2.36
PNLDC1Q8NA58 SNORA49-201ENST00000386157 136 ntBASIC0.3□□□□□ -2.36
PNLDC1Q8NA58 RNU6-604P-201ENST00000390917 100 ntBASIC0.3□□□□□ -2.36
PNLDC1Q8NA58 RNU6-587P-201ENST00000391282 106 ntBASIC0.3□□□□□ -2.36
PNLDC1Q8NA58 MIR548H2-201ENST00000408874 88 ntBASIC0.3□□□□□ -2.36
PNLDC1Q8NA58 RNA5SP147-201ENST00000516493 109 ntBASIC0.3□□□□□ -2.36
PNLDC1Q8NA58 RNU6-782P-201ENST00000516852 104 ntBASIC0.3□□□□□ -2.36
PNLDC1Q8NA58 AC084368.1-201ENST00000620935 65 ntBASIC0.3□□□□□ -2.36
PNLDC1Q8NA58 SNORD114-29-201ENST00000364819 70 ntBASIC0.29□□□□□ -2.36
PNLDC1Q8NA58 snoU13.13-201ENST00000458842 104 ntBASIC0.29□□□□□ -2.36
PNLDC1Q8NA58 SNORA63.6-201ENST00000364921 119 ntBASIC0.28□□□□□ -2.36
PNLDC1Q8NA58 SCARNA11.2-201ENST00000517183 154 ntBASIC0.28□□□□□ -2.36
PNLDC1Q8NA58 MIR6739-201ENST00000622461 75 ntBASIC0.28□□□□□ -2.36
PNLDC1Q8NA58 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.28□□□□□ -2.36
PNLDC1Q8NA58 Y_RNA.250-201ENST00000364542 110 ntBASIC0.27□□□□□ -2.37
PNLDC1Q8NA58 SNORD115-31-201ENST00000365318 82 ntBASIC0.27□□□□□ -2.37
PNLDC1Q8NA58 RNU6-1296P-201ENST00000383879 107 ntBASIC0.27□□□□□ -2.37
PNLDC1Q8NA58 Y_RNA.565-201ENST00000384719 101 ntBASIC0.27□□□□□ -2.37
PNLDC1Q8NA58 AC021146.9-201ENST00000512503 156 ntBASIC0.27□□□□□ -2.37
PNLDC1Q8NA58 SNORD45A-201ENST00000384512 84 ntBASIC0.26□□□□□ -2.37
PNLDC1Q8NA58 Y_RNA.545-201ENST00000384652 105 ntBASIC0.26□□□□□ -2.37
PNLDC1Q8NA58 MIR4315-1-201ENST00000636800 73 ntBASIC0.26□□□□□ -2.37
PNLDC1Q8NA58 MIR4315-2-201ENST00000640925 73 ntBASIC0.26□□□□□ -2.37
PNLDC1Q8NA58 MIR193B-201ENST00000384907 83 ntBASIC0.25□□□□□ -2.37
PNLDC1Q8NA58 MIR643-201ENST00000385267 97 ntBASIC0.25□□□□□ -2.37
PNLDC1Q8NA58 SNORA75.1-201ENST00000391130 148 ntBASIC0.25□□□□□ -2.37
PNLDC1Q8NA58 RNU6-634P-201ENST00000459134 106 ntBASIC0.25□□□□□ -2.37
PNLDC1Q8NA58 RNU6-982P-201ENST00000516216 102 ntBASIC0.25□□□□□ -2.37
PNLDC1Q8NA58 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
PNLDC1Q8NA58 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
PNLDC1Q8NA58 SNORD114-26-201ENST00000363543 72 ntBASIC0.24□□□□□ -2.37
PNLDC1Q8NA58 MIR154-201ENST00000385243 84 ntBASIC0.24□□□□□ -2.37
PNLDC1Q8NA58 RNU6-656P-201ENST00000516785 107 ntBASIC0.24□□□□□ -2.37
PNLDC1Q8NA58 MIR8053-201ENST00000613344 75 ntBASIC0.24□□□□□ -2.37
PNLDC1Q8NA58 SNORD113.1-201ENST00000363280 73 ntBASIC0.23□□□□□ -2.37
PNLDC1Q8NA58 MIR106A-201ENST00000384870 81 ntBASIC0.23□□□□□ -2.37
PNLDC1Q8NA58 RNA5SP480-201ENST00000516840 109 ntBASIC0.23□□□□□ -2.37
PNLDC1Q8NA58 SNORA42.1-201ENST00000363515 137 ntBASIC0.22□□□□□ -2.37
PNLDC1Q8NA58 RNU6-645P-201ENST00000364649 106 ntBASIC0.22□□□□□ -2.37
PNLDC1Q8NA58 RNU6-1036P-201ENST00000383959 104 ntBASIC0.22□□□□□ -2.37
PNLDC1Q8NA58 MIR521-2-201ENST00000384818 87 ntBASIC0.22□□□□□ -2.37
PNLDC1Q8NA58 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
PNLDC1Q8NA58 SNORA33.1-201ENST00000364957 130 ntBASIC0.21□□□□□ -2.38
PNLDC1Q8NA58 SNORA15B-2-201ENST00000384058 135 ntBASIC0.21□□□□□ -2.38
PNLDC1Q8NA58 SNORA15B-1-201ENST00000384334 135 ntBASIC0.21□□□□□ -2.38
PNLDC1Q8NA58 RNU6-540P-201ENST00000384622 101 ntBASIC0.21□□□□□ -2.38
PNLDC1Q8NA58 Y_RNA.540-201ENST00000384638 111 ntBASIC0.21□□□□□ -2.38
PNLDC1Q8NA58 RNU6-881P-201ENST00000516813 102 ntBASIC0.21□□□□□ -2.38
PNLDC1Q8NA58 MIR1273G-201ENST00000577677 100 ntBASIC0.21□□□□□ -2.38
PNLDC1Q8NA58 SNORD116-24-201ENST00000384549 92 ntBASIC0.2□□□□□ -2.38
PNLDC1Q8NA58 SNORD2-201ENST00000459163 69 ntBASIC0.19□□□□□ -2.38
PNLDC1Q8NA58 RNU6-180P-201ENST00000516697 61 ntBASIC0.19□□□□□ -2.38
PNLDC1Q8NA58 AC104408.1-201ENST00000605241 170 ntBASIC0.19□□□□□ -2.38
PNLDC1Q8NA58 AC090617.8-201ENST00000623339 167 ntBASIC0.19□□□□□ -2.38
PNLDC1Q8NA58 RNA5SP325-201ENST00000363756 130 ntBASIC0.18□□□□□ -2.38
PNLDC1Q8NA58 RNU6-1162P-201ENST00000384443 104 ntBASIC0.18□□□□□ -2.38
PNLDC1Q8NA58 RNU6-337P-201ENST00000391243 106 ntBASIC0.18□□□□□ -2.38
PNLDC1Q8NA58 SNORA62.5-201ENST00000516634 120 ntBASIC0.18□□□□□ -2.38
PNLDC1Q8NA58 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
PNLDC1Q8NA58 MIR924-201ENST00000638017 53 ntBASIC0.18□□□□□ -2.38
PNLDC1Q8NA58 RNA5SP214-201ENST00000363378 118 ntBASIC0.17□□□□□ -2.38
PNLDC1Q8NA58 SNORD114-9-201ENST00000364370 72 ntBASIC0.17□□□□□ -2.38
PNLDC1Q8NA58 RNU6-502P-201ENST00000362419 108 ntBASIC0.16□□□□□ -2.38
PNLDC1Q8NA58 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
PNLDC1Q8NA58 RNA5SP163-201ENST00000410304 99 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 237.9 ms