Protein–RNA interactions for Protein: Q86VR2

RETREG3, Reticulophagy regulator 3, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3Q86VR2 RNU6-518P-201ENST00000516056 96 ntBASIC1.21□□□□□ -2.22
RETREG3Q86VR2 MIR4421-201ENST00000578133 69 ntBASIC1.21□□□□□ -2.22
RETREG3Q86VR2 U7.6-201ENST00000610841 64 ntBASIC1.21□□□□□ -2.22
RETREG3Q86VR2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.2□□□□□ -2.22
RETREG3Q86VR2 SNORD113-4-201ENST00000364802 75 ntBASIC1.2□□□□□ -2.22
RETREG3Q86VR2 SNORA2A-201ENST00000383885 135 ntBASIC1.2□□□□□ -2.22
RETREG3Q86VR2 SNORD114-29-201ENST00000364819 70 ntBASIC1.19□□□□□ -2.22
RETREG3Q86VR2 RNU6-321P-201ENST00000410912 106 ntBASIC1.19□□□□□ -2.22
RETREG3Q86VR2 SNORA40.8-201ENST00000411034 126 ntBASIC1.19□□□□□ -2.22
RETREG3Q86VR2 SNORD2-201ENST00000459163 69 ntBASIC1.19□□□□□ -2.22
RETREG3Q86VR2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.19□□□□□ -2.22
RETREG3Q86VR2 RNU6-229P-201ENST00000516614 102 ntBASIC1.19□□□□□ -2.22
RETREG3Q86VR2 AC090617.8-201ENST00000623339 167 ntBASIC1.19□□□□□ -2.22
RETREG3Q86VR2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.18□□□□□ -2.22
RETREG3Q86VR2 SNORD118-201ENST00000363593 134 ntBASIC1.18□□□□□ -2.22
RETREG3Q86VR2 RNU6-936P-201ENST00000384005 107 ntBASIC1.18□□□□□ -2.22
RETREG3Q86VR2 RNU6-1246P-201ENST00000391064 107 ntBASIC1.18□□□□□ -2.22
RETREG3Q86VR2 SNORD71-201ENST00000411292 86 ntBASIC1.18□□□□□ -2.22
RETREG3Q86VR2 MIR3660-201ENST00000584845 100 ntBASIC1.18□□□□□ -2.22
RETREG3Q86VR2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.17□□□□□ -2.22
RETREG3Q86VR2 Y_RNA.423-201ENST00000384057 113 ntBASIC1.17□□□□□ -2.22
RETREG3Q86VR2 SNORA41B-201ENST00000384785 128 ntBASIC1.17□□□□□ -2.22
RETREG3Q86VR2 MIR608-201ENST00000384820 100 ntBASIC1.17□□□□□ -2.22
RETREG3Q86VR2 RNU6-808P-201ENST00000391233 108 ntBASIC1.17□□□□□ -2.22
RETREG3Q86VR2 MIR1255B2-201ENST00000408618 67 ntBASIC1.17□□□□□ -2.22
RETREG3Q86VR2 RNU6-520P-201ENST00000384717 104 ntBASIC1.16□□□□□ -2.22
RETREG3Q86VR2 MIR6078-201ENST00000611069 100 ntBASIC1.16□□□□□ -2.22
RETREG3Q86VR2 AL353770.2-201ENST00000620024 78 ntBASIC1.16□□□□□ -2.22
RETREG3Q86VR2 AC243829.3-201ENST00000622177 108 ntBASIC1.16□□□□□ -2.22
RETREG3Q86VR2 RNU6-392P-201ENST00000364926 101 ntBASIC1.15□□□□□ -2.23
RETREG3Q86VR2 RNU7-188P-201ENST00000517063 64 ntBASIC1.15□□□□□ -2.23
RETREG3Q86VR2 RNU6-1312P-201ENST00000362425 108 ntBASIC1.14□□□□□ -2.23
RETREG3Q86VR2 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
RETREG3Q86VR2 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
RETREG3Q86VR2 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
RETREG3Q86VR2 Y_RNA.74-201ENST00000362911 99 ntBASIC1.12□□□□□ -2.23
RETREG3Q86VR2 MIR519A2-201ENST00000384990 87 ntBASIC1.12□□□□□ -2.23
RETREG3Q86VR2 RNU7-119P-201ENST00000459279 63 ntBASIC1.12□□□□□ -2.23
RETREG3Q86VR2 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
RETREG3Q86VR2 MIR527-201ENST00000385244 85 ntBASIC1.11□□□□□ -2.23
RETREG3Q86VR2 RNU6-1232P-201ENST00000516299 86 ntBASIC1.11□□□□□ -2.23
RETREG3Q86VR2 MIR518A1-201ENST00000385068 85 ntBASIC1.1□□□□□ -2.23
RETREG3Q86VR2 RNA5SP247-201ENST00000411181 105 ntBASIC1.1□□□□□ -2.23
RETREG3Q86VR2 RNU4-54P-201ENST00000516428 129 ntBASIC1.1□□□□□ -2.23
RETREG3Q86VR2 MIR6773-201ENST00000612812 74 ntBASIC1.1□□□□□ -2.23
RETREG3Q86VR2 RNU6-1184P-201ENST00000384588 108 ntBASIC1.09□□□□□ -2.23
RETREG3Q86VR2 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.09□□□□□ -2.23
RETREG3Q86VR2 MIR4677-201ENST00000584153 80 ntBASIC1.09□□□□□ -2.23
RETREG3Q86VR2 SNORD116-16-201ENST00000384533 92 ntBASIC1.08□□□□□ -2.24
RETREG3Q86VR2 RNU6-337P-201ENST00000391243 106 ntBASIC1.08□□□□□ -2.24
RETREG3Q86VR2 AC084368.1-201ENST00000620935 65 ntBASIC1.08□□□□□ -2.24
RETREG3Q86VR2 RNU6-110P-201ENST00000384508 104 ntBASIC1.07□□□□□ -2.24
RETREG3Q86VR2 MIR499A-201ENST00000384903 122 ntBASIC1.07□□□□□ -2.24
RETREG3Q86VR2 SNORA49-201ENST00000386157 136 ntBASIC1.07□□□□□ -2.24
RETREG3Q86VR2 MIR501-201ENST00000390204 84 ntBASIC1.07□□□□□ -2.24
RETREG3Q86VR2 RNU6-231P-201ENST00000517122 103 ntBASIC1.07□□□□□ -2.24
RETREG3Q86VR2 AL590095.2-201ENST00000604136 117 ntBASIC1.07□□□□□ -2.24
RETREG3Q86VR2 MIR760-201ENST00000390220 80 ntBASIC1.06□□□□□ -2.24
RETREG3Q86VR2 RNU6-175P-201ENST00000516896 107 ntBASIC1.06□□□□□ -2.24
RETREG3Q86VR2 MIR6755-201ENST00000619993 66 ntBASIC1.06□□□□□ -2.24
RETREG3Q86VR2 Y_RNA.282-201ENST00000364793 102 ntBASIC1.05□□□□□ -2.24
RETREG3Q86VR2 RNU6-1036P-201ENST00000383959 104 ntBASIC1.05□□□□□ -2.24
RETREG3Q86VR2 MIR8070-201ENST00000616510 88 ntBASIC1.05□□□□□ -2.24
RETREG3Q86VR2 SNORD115-25-201ENST00000362619 82 ntBASIC1.04□□□□□ -2.24
RETREG3Q86VR2 Y_RNA.226-201ENST00000364337 114 ntBASIC1.04□□□□□ -2.24
RETREG3Q86VR2 MIR1287-201ENST00000408492 90 ntBASIC1.04□□□□□ -2.24
RETREG3Q86VR2 RNU6-848P-201ENST00000515948 107 ntBASIC1.04□□□□□ -2.24
RETREG3Q86VR2 RNU6-617P-201ENST00000516147 107 ntBASIC1.04□□□□□ -2.24
RETREG3Q86VR2 RNU6-473P-201ENST00000516164 107 ntBASIC1.04□□□□□ -2.24
RETREG3Q86VR2 RNU7-154P-201ENST00000516194 62 ntBASIC1.04□□□□□ -2.24
RETREG3Q86VR2 RNU6-1049P-201ENST00000516414 107 ntBASIC1.04□□□□□ -2.24
RETREG3Q86VR2 MIR548AD-201ENST00000584780 82 ntBASIC1.04□□□□□ -2.24
RETREG3Q86VR2 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
RETREG3Q86VR2 SNORD116.2-201ENST00000391251 93 ntBASIC1.03□□□□□ -2.24
RETREG3Q86VR2 RNA5SP470-201ENST00000516463 106 ntBASIC1.03□□□□□ -2.24
RETREG3Q86VR2 AC211469.2-201ENST00000605461 205 ntBASIC1.03□□□□□ -2.24
RETREG3Q86VR2 AC098934.3-201ENST00000430450 190 ntBASIC1.02□□□□□ -2.25
RETREG3Q86VR2 PSMC1P5-201ENST00000512850 177 ntBASIC1.02□□□□□ -2.25
RETREG3Q86VR2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
RETREG3Q86VR2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
RETREG3Q86VR2 MIRLET7B-201ENST00000385140 83 ntBASIC1.01□□□□□ -2.25
RETREG3Q86VR2 SNORD114-21-201ENST00000606412 72 ntBASIC1.01□□□□□ -2.25
RETREG3Q86VR2 MIR6504-201ENST00000613520 61 ntBASIC1.01□□□□□ -2.25
RETREG3Q86VR2 RNU7-129P-201ENST00000516128 62 ntBASIC1□□□□□ -2.25
RETREG3Q86VR2 RNA5SP128-201ENST00000365305 116 ntBASIC0.99□□□□□ -2.25
RETREG3Q86VR2 AC087343.1-201ENST00000477341 475 ntBASIC0.99□□□□□ -2.25
RETREG3Q86VR2 RNU6-782P-201ENST00000516852 104 ntBASIC0.99□□□□□ -2.25
RETREG3Q86VR2 MIR4295-201ENST00000585286 85 ntBASIC0.99□□□□□ -2.25
RETREG3Q86VR2 MIR7110-201ENST00000612638 86 ntBASIC0.99□□□□□ -2.25
RETREG3Q86VR2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
RETREG3Q86VR2 RNU6-502P-201ENST00000362419 108 ntBASIC0.98□□□□□ -2.25
RETREG3Q86VR2 RNU6-246P-201ENST00000384702 107 ntBASIC0.98□□□□□ -2.25
RETREG3Q86VR2 MIR1276-201ENST00000408707 83 ntBASIC0.98□□□□□ -2.25
RETREG3Q86VR2 MIR429-201ENST00000362106 83 ntBASIC0.97□□□□□ -2.25
RETREG3Q86VR2 RNA5SP102-201ENST00000516865 106 ntBASIC0.97□□□□□ -2.25
RETREG3Q86VR2 RN7SL660P-201ENST00000614852 299 ntBASIC0.97□□□□□ -2.25
RETREG3Q86VR2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.96□□□□□ -2.26
RETREG3Q86VR2 MIR548AG1-201ENST00000579932 66 ntBASIC0.96□□□□□ -2.26
RETREG3Q86VR2 MIR499B-201ENST00000636498 73 ntBASIC0.96□□□□□ -2.26
RETREG3Q86VR2 Y_RNA.224-201ENST00000364308 111 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 736.9 ms