Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
PRPF38BQ5VTL8 RNU1-124P-201ENST00000363861 145 ntBASIC1.53□□□□□ -2.16
PRPF38BQ5VTL8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.53□□□□□ -2.16
PRPF38BQ5VTL8 U2.7-201ENST00000619197 100 ntBASIC1.52□□□□□ -2.17
PRPF38BQ5VTL8 AL162376.1-201ENST00000624117 175 ntBASIC1.52□□□□□ -2.17
PRPF38BQ5VTL8 MIR18A-201ENST00000362310 71 ntBASIC1.51□□□□□ -2.17
PRPF38BQ5VTL8 RNU6-936P-201ENST00000384005 107 ntBASIC1.51□□□□□ -2.17
PRPF38BQ5VTL8 Y_RNA.633-201ENST00000459107 95 ntBASIC1.51□□□□□ -2.17
PRPF38BQ5VTL8 AC021146.9-201ENST00000512503 156 ntBASIC1.51□□□□□ -2.17
PRPF38BQ5VTL8 RNU7-174P-201ENST00000516248 59 ntBASIC1.51□□□□□ -2.17
PRPF38BQ5VTL8 MIR3660-201ENST00000584845 100 ntBASIC1.51□□□□□ -2.17
PRPF38BQ5VTL8 U4.4-201ENST00000620626 117 ntBASIC1.5□□□□□ -2.17
PRPF38BQ5VTL8 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.5□□□□□ -2.17
PRPF38BQ5VTL8 RNU6-1184P-201ENST00000384588 108 ntBASIC1.49□□□□□ -2.17
PRPF38BQ5VTL8 MIR517B-201ENST00000385102 67 ntBASIC1.49□□□□□ -2.17
PRPF38BQ5VTL8 RNU6-808P-201ENST00000391233 108 ntBASIC1.49□□□□□ -2.17
PRPF38BQ5VTL8 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.49□□□□□ -2.17
PRPF38BQ5VTL8 MIR8087-201ENST00000612745 78 ntBASIC1.49□□□□□ -2.17
PRPF38BQ5VTL8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
PRPF38BQ5VTL8 RNU6-698P-201ENST00000363523 107 ntBASIC1.48□□□□□ -2.17
PRPF38BQ5VTL8 RNU6-34P-201ENST00000364874 107 ntBASIC1.48□□□□□ -2.17
PRPF38BQ5VTL8 SNORA33.1-201ENST00000364957 130 ntBASIC1.48□□□□□ -2.17
PRPF38BQ5VTL8 RNU4-45P-201ENST00000365469 141 ntBASIC1.48□□□□□ -2.17
PRPF38BQ5VTL8 VTRNA1-3-201ENST00000365645 89 ntBASIC1.48□□□□□ -2.17
PRPF38BQ5VTL8 RNU6-939P-201ENST00000384634 107 ntBASIC1.48□□□□□ -2.17
PRPF38BQ5VTL8 RNA5SP222-201ENST00000411039 105 ntBASIC1.48□□□□□ -2.17
PRPF38BQ5VTL8 MIR6828-201ENST00000636181 60 ntBASIC1.48□□□□□ -2.17
PRPF38BQ5VTL8 MIR150-201ENST00000385048 84 ntBASIC1.47□□□□□ -2.17
PRPF38BQ5VTL8 MIR652-201ENST00000385278 98 ntBASIC1.47□□□□□ -2.17
PRPF38BQ5VTL8 MIR758-201ENST00000390227 88 ntBASIC1.47□□□□□ -2.17
PRPF38BQ5VTL8 SNORD113-2-201ENST00000391082 72 ntBASIC1.47□□□□□ -2.17
PRPF38BQ5VTL8 MIR1304-201ENST00000408243 91 ntBASIC1.47□□□□□ -2.17
PRPF38BQ5VTL8 AC010487.4-201ENST00000637027 61 ntBASIC1.47□□□□□ -2.17
PRPF38BQ5VTL8 SNORA15B-2-201ENST00000384058 135 ntBASIC1.46□□□□□ -2.18
PRPF38BQ5VTL8 SNORA15B-1-201ENST00000384334 135 ntBASIC1.46□□□□□ -2.18
PRPF38BQ5VTL8 SCARNA17.3-201ENST00000516381 125 ntBASIC1.46□□□□□ -2.18
PRPF38BQ5VTL8 RNA5SP268-201ENST00000516828 124 ntBASIC1.46□□□□□ -2.18
PRPF38BQ5VTL8 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.46□□□□□ -2.18
PRPF38BQ5VTL8 AC211469.2-201ENST00000605461 205 ntBASIC1.46□□□□□ -2.18
PRPF38BQ5VTL8 Y_RNA.125-201ENST00000363371 111 ntBASIC1.45□□□□□ -2.18
PRPF38BQ5VTL8 MIR582-201ENST00000365731 98 ntBASIC1.45□□□□□ -2.18
PRPF38BQ5VTL8 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
PRPF38BQ5VTL8 MIR548AE1-201ENST00000583292 70 ntBASIC1.45□□□□□ -2.18
PRPF38BQ5VTL8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
PRPF38BQ5VTL8 Y_RNA.407-201ENST00000383986 113 ntBASIC1.44□□□□□ -2.18
PRPF38BQ5VTL8 CYP3A137P-201ENST00000562436 69 ntBASIC1.44□□□□□ -2.18
PRPF38BQ5VTL8 RNU6-1312P-201ENST00000362425 108 ntBASIC1.43□□□□□ -2.18
PRPF38BQ5VTL8 SNORA36.1-201ENST00000363424 132 ntBASIC1.43□□□□□ -2.18
PRPF38BQ5VTL8 SNORD114-23-201ENST00000363536 72 ntBASIC1.43□□□□□ -2.18
PRPF38BQ5VTL8 SNORA63.6-201ENST00000364921 119 ntBASIC1.43□□□□□ -2.18
PRPF38BQ5VTL8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
PRPF38BQ5VTL8 RNA5SP94-201ENST00000516917 108 ntBASIC1.43□□□□□ -2.18
PRPF38BQ5VTL8 uc_338.10-201ENST00000621872 182 ntBASIC1.43□□□□□ -2.18
PRPF38BQ5VTL8 MIR548E-201ENST00000408287 88 ntBASIC1.42□□□□□ -2.18
PRPF38BQ5VTL8 AC006210.1-201ENST00000424882 111 ntBASIC1.42□□□□□ -2.18
PRPF38BQ5VTL8 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.42□□□□□ -2.18
PRPF38BQ5VTL8 AC087343.1-201ENST00000477341 475 ntBASIC1.42□□□□□ -2.18
PRPF38BQ5VTL8 MIR4473-201ENST00000583731 91 ntBASIC1.41□□□□□ -2.18
PRPF38BQ5VTL8 MIR4295-201ENST00000585286 85 ntBASIC1.41□□□□□ -2.18
PRPF38BQ5VTL8 MIR330-201ENST00000362196 94 ntBASIC1.39□□□□□ -2.19
PRPF38BQ5VTL8 SNORA36.2-201ENST00000384004 127 ntBASIC1.39□□□□□ -2.19
PRPF38BQ5VTL8 MIR320A-201ENST00000385302 82 ntBASIC1.39□□□□□ -2.19
PRPF38BQ5VTL8 SNORD110-201ENST00000408189 75 ntBASIC1.39□□□□□ -2.19
PRPF38BQ5VTL8 MIR373-201ENST00000362273 69 ntBASIC1.38□□□□□ -2.19
PRPF38BQ5VTL8 SNORA41B-201ENST00000384785 128 ntBASIC1.38□□□□□ -2.19
PRPF38BQ5VTL8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.38□□□□□ -2.19
PRPF38BQ5VTL8 AL353765.1-201ENST00000605514 183 ntBASIC1.38□□□□□ -2.19
PRPF38BQ5VTL8 MIR7107-201ENST00000611489 80 ntBASIC1.38□□□□□ -2.19
PRPF38BQ5VTL8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
PRPF38BQ5VTL8 Y_RNA.325-201ENST00000365171 122 ntBASIC1.37□□□□□ -2.19
PRPF38BQ5VTL8 RNU6-520P-201ENST00000384717 104 ntBASIC1.37□□□□□ -2.19
PRPF38BQ5VTL8 Y_RNA.246-201ENST00000364495 108 ntBASIC1.36□□□□□ -2.19
PRPF38BQ5VTL8 RNU6-1246P-201ENST00000391064 107 ntBASIC1.36□□□□□ -2.19
PRPF38BQ5VTL8 MIR548AD-201ENST00000584780 82 ntBASIC1.36□□□□□ -2.19
PRPF38BQ5VTL8 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.35□□□□□ -2.19
PRPF38BQ5VTL8 CYP3A54P-201ENST00000566950 75 ntBASIC1.34□□□□□ -2.19
PRPF38BQ5VTL8 MIR4661-201ENST00000582720 75 ntBASIC1.34□□□□□ -2.19
PRPF38BQ5VTL8 SNORA70.25-201ENST00000612741 95 ntBASIC1.34□□□□□ -2.19
PRPF38BQ5VTL8 MIR6513-201ENST00000621188 64 ntBASIC1.34□□□□□ -2.19
PRPF38BQ5VTL8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
PRPF38BQ5VTL8 SNORA9.1-201ENST00000362412 131 ntBASIC1.33□□□□□ -2.2
PRPF38BQ5VTL8 AC090617.8-201ENST00000623339 167 ntBASIC1.33□□□□□ -2.2
PRPF38BQ5VTL8 RNU4-88P-201ENST00000411220 86 ntBASIC1.32□□□□□ -2.2
PRPF38BQ5VTL8 MIR516B1-201ENST00000385211 90 ntBASIC1.31□□□□□ -2.2
PRPF38BQ5VTL8 MIR4752-201ENST00000579672 72 ntBASIC1.31□□□□□ -2.2
PRPF38BQ5VTL8 MIR1197-201ENST00000408818 88 ntBASIC1.3□□□□□ -2.2
PRPF38BQ5VTL8 U6.96-201ENST00000636425 70 ntBASIC1.3□□□□□ -2.2
PRPF38BQ5VTL8 Y_RNA.379-201ENST00000365653 102 ntBASIC1.29□□□□□ -2.2
PRPF38BQ5VTL8 RNY1P8-201ENST00000383970 114 ntBASIC1.29□□□□□ -2.2
PRPF38BQ5VTL8 HMGN2P22-201ENST00000427588 175 ntBASIC1.29□□□□□ -2.2
PRPF38BQ5VTL8 RNU1-29P-201ENST00000606574 126 ntBASIC1.29□□□□□ -2.2
PRPF38BQ5VTL8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
PRPF38BQ5VTL8 MIR936-201ENST00000401264 98 ntBASIC1.28□□□□□ -2.2
PRPF38BQ5VTL8 RNU6-231P-201ENST00000517122 103 ntBASIC1.28□□□□□ -2.2
PRPF38BQ5VTL8 MIR7974-201ENST00000615835 79 ntBASIC1.28□□□□□ -2.2
PRPF38BQ5VTL8 MIR140-201ENST00000385282 100 ntBASIC1.27□□□□□ -2.21
PRPF38BQ5VTL8 AL021921.1-201ENST00000442774 93 ntBASIC1.27□□□□□ -2.21
PRPF38BQ5VTL8 RNU7-119P-201ENST00000459279 63 ntBASIC1.27□□□□□ -2.21
PRPF38BQ5VTL8 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
PRPF38BQ5VTL8 RNA5SP517-201ENST00000364724 117 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms