Protein–RNA interactions for Protein: Q2UY09

COL28A1, Collagen alpha-1(XXVIII) chain, humanhuman

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1Q2UY09 MIR582-201ENST00000365731 98 ntBASIC-0.14□□□□□ -2.43
COL28A1Q2UY09 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.14□□□□□ -2.43
COL28A1Q2UY09 RNU7-24P-201ENST00000458867 62 ntBASIC-0.14□□□□□ -2.43
COL28A1Q2UY09 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.14□□□□□ -2.43
COL28A1Q2UY09 MIR488-201ENST00000365739 83 ntBASIC-0.15□□□□□ -2.43
COL28A1Q2UY09 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
COL28A1Q2UY09 MIR548E-201ENST00000408287 88 ntBASIC-0.15□□□□□ -2.43
COL28A1Q2UY09 SNORD75.2-201ENST00000408784 58 ntBASIC-0.15□□□□□ -2.43
COL28A1Q2UY09 snoU13.17-201ENST00000458802 104 ntBASIC-0.15□□□□□ -2.43
COL28A1Q2UY09 RNU7-153P-201ENST00000516455 62 ntBASIC-0.15□□□□□ -2.43
COL28A1Q2UY09 MIR4668-201ENST00000582284 70 ntBASIC-0.15□□□□□ -2.43
COL28A1Q2UY09 MIR655-201ENST00000362159 97 ntBASIC-0.16□□□□□ -2.44
COL28A1Q2UY09 RNU5F-1-201ENST00000362507 117 ntBASIC-0.16□□□□□ -2.44
COL28A1Q2UY09 RNU6-633P-201ENST00000362612 103 ntBASIC-0.16□□□□□ -2.44
COL28A1Q2UY09 SNORA18.1-201ENST00000363418 128 ntBASIC-0.16□□□□□ -2.44
COL28A1Q2UY09 MIR519C-201ENST00000385053 87 ntBASIC-0.16□□□□□ -2.44
COL28A1Q2UY09 SNORA49-201ENST00000386157 136 ntBASIC-0.16□□□□□ -2.44
COL28A1Q2UY09 AC244250.2-201ENST00000418731 148 ntBASIC-0.16□□□□□ -2.44
COL28A1Q2UY09 RNU6-824P-201ENST00000363724 104 ntBASIC-0.17□□□□□ -2.44
COL28A1Q2UY09 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
COL28A1Q2UY09 AC097510.1-201ENST00000510945 133 ntBASIC-0.17□□□□□ -2.44
COL28A1Q2UY09 RNU6-219P-201ENST00000364728 107 ntBASIC-0.18□□□□□ -2.44
COL28A1Q2UY09 RNU6-382P-201ENST00000365181 106 ntBASIC-0.18□□□□□ -2.44
COL28A1Q2UY09 SNORD114-12-201ENST00000365400 75 ntBASIC-0.18□□□□□ -2.44
COL28A1Q2UY09 SNORD116-22-201ENST00000384430 92 ntBASIC-0.18□□□□□ -2.44
COL28A1Q2UY09 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.18□□□□□ -2.44
COL28A1Q2UY09 SNORD4A-201ENST00000459174 72 ntBASIC-0.18□□□□□ -2.44
COL28A1Q2UY09 RNU6-168P-201ENST00000516189 101 ntBASIC-0.18□□□□□ -2.44
COL28A1Q2UY09 AC145423.2-201ENST00000610631 239 ntBASIC-0.18□□□□□ -2.44
COL28A1Q2UY09 RNU6-153P-201ENST00000364422 104 ntBASIC-0.19□□□□□ -2.44
COL28A1Q2UY09 RNU6-497P-201ENST00000365316 104 ntBASIC-0.19□□□□□ -2.44
COL28A1Q2UY09 RNA5SP89-201ENST00000410300 108 ntBASIC-0.19□□□□□ -2.44
COL28A1Q2UY09 SNORD2-201ENST00000459163 69 ntBASIC-0.19□□□□□ -2.44
COL28A1Q2UY09 AC006254.2-201ENST00000603259 279 ntBASIC-0.19□□□□□ -2.44
COL28A1Q2UY09 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.2□□□□□ -2.44
COL28A1Q2UY09 RNU6-990P-201ENST00000364385 104 ntBASIC-0.2□□□□□ -2.44
COL28A1Q2UY09 RNY1P7-201ENST00000384743 110 ntBASIC-0.2□□□□□ -2.44
COL28A1Q2UY09 MIR8064-201ENST00000612863 90 ntBASIC-0.2□□□□□ -2.44
COL28A1Q2UY09 SNORD115-25-201ENST00000362619 82 ntBASIC-0.21□□□□□ -2.44
COL28A1Q2UY09 RNU6-402P-201ENST00000410678 103 ntBASIC-0.21□□□□□ -2.44
COL28A1Q2UY09 RNU6-267P-201ENST00000516714 103 ntBASIC-0.21□□□□□ -2.44
COL28A1Q2UY09 AP000676.1-201ENST00000533307 52 ntBASIC-0.21□□□□□ -2.44
COL28A1Q2UY09 MIR3666-201ENST00000607845 111 ntBASIC-0.21□□□□□ -2.44
COL28A1Q2UY09 U6.81-201ENST00000612550 106 ntBASIC-0.21□□□□□ -2.44
COL28A1Q2UY09 MIR4773-1-201ENST00000637203 78 ntBASIC-0.21□□□□□ -2.44
COL28A1Q2UY09 SNORA63.6-201ENST00000364921 119 ntBASIC-0.22□□□□□ -2.44
COL28A1Q2UY09 RNU6-455P-201ENST00000384681 107 ntBASIC-0.22□□□□□ -2.44
COL28A1Q2UY09 MIR9-2-201ENST00000384838 87 ntBASIC-0.22□□□□□ -2.44
COL28A1Q2UY09 RNU6-320P-201ENST00000516511 106 ntBASIC-0.22□□□□□ -2.44
COL28A1Q2UY09 SNORA40.17-201ENST00000517256 115 ntBASIC-0.22□□□□□ -2.44
COL28A1Q2UY09 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.23□□□□□ -2.45
COL28A1Q2UY09 SNORD115-37-201ENST00000363768 82 ntBASIC-0.23□□□□□ -2.45
COL28A1Q2UY09 RNA5SP275-201ENST00000363936 118 ntBASIC-0.23□□□□□ -2.45
COL28A1Q2UY09 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.23□□□□□ -2.45
COL28A1Q2UY09 RNU6-675P-201ENST00000384236 104 ntBASIC-0.23□□□□□ -2.45
COL28A1Q2UY09 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.23□□□□□ -2.45
COL28A1Q2UY09 RNU6-592P-201ENST00000411333 103 ntBASIC-0.23□□□□□ -2.45
COL28A1Q2UY09 AL450471.1-201ENST00000447509 127 ntBASIC-0.23□□□□□ -2.45
COL28A1Q2UY09 AC093729.1-201ENST00000513074 128 ntBASIC-0.23□□□□□ -2.45
COL28A1Q2UY09 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.23□□□□□ -2.45
COL28A1Q2UY09 RNU6-502P-201ENST00000362419 108 ntBASIC-0.24□□□□□ -2.45
COL28A1Q2UY09 RNU6-624P-201ENST00000363411 107 ntBASIC-0.24□□□□□ -2.45
COL28A1Q2UY09 RNU6-49P-201ENST00000384256 107 ntBASIC-0.24□□□□□ -2.45
COL28A1Q2UY09 RNU6-900P-201ENST00000384498 102 ntBASIC-0.24□□□□□ -2.45
COL28A1Q2UY09 RNA5SP300-201ENST00000391197 107 ntBASIC-0.24□□□□□ -2.45
COL28A1Q2UY09 AC096531.1-201ENST00000419107 107 ntBASIC-0.24□□□□□ -2.45
COL28A1Q2UY09 RNU6-274P-201ENST00000459566 107 ntBASIC-0.24□□□□□ -2.45
COL28A1Q2UY09 RNU6-844P-201ENST00000517175 102 ntBASIC-0.24□□□□□ -2.45
COL28A1Q2UY09 AC140658.3-201ENST00000567603 271 ntBASIC-0.24□□□□□ -2.45
COL28A1Q2UY09 AL590491.3-201ENST00000610731 82 ntBASIC-0.24□□□□□ -2.45
COL28A1Q2UY09 MIR548BB-201ENST00000626714 66 ntBASIC-0.24□□□□□ -2.45
COL28A1Q2UY09 RNU6-208P-201ENST00000362431 107 ntBASIC-0.25□□□□□ -2.45
COL28A1Q2UY09 SNORD114-11-201ENST00000363738 75 ntBASIC-0.25□□□□□ -2.45
COL28A1Q2UY09 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.25□□□□□ -2.45
COL28A1Q2UY09 RNU6-260P-201ENST00000384092 107 ntBASIC-0.25□□□□□ -2.45
COL28A1Q2UY09 SNORD77.2-201ENST00000391045 68 ntBASIC-0.25□□□□□ -2.45
COL28A1Q2UY09 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.25□□□□□ -2.45
COL28A1Q2UY09 RNU7-55P-201ENST00000459426 62 ntBASIC-0.25□□□□□ -2.45
COL28A1Q2UY09 MIR4263-201ENST00000584745 83 ntBASIC-0.25□□□□□ -2.45
COL28A1Q2UY09 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.25□□□□□ -2.45
COL28A1Q2UY09 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.26□□□□□ -2.45
COL28A1Q2UY09 RNU6-340P-201ENST00000364005 107 ntBASIC-0.26□□□□□ -2.45
COL28A1Q2UY09 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.26□□□□□ -2.45
COL28A1Q2UY09 MIR196A2-201ENST00000385189 110 ntBASIC-0.26□□□□□ -2.45
COL28A1Q2UY09 RNU4-63P-201ENST00000411313 118 ntBASIC-0.26□□□□□ -2.45
COL28A1Q2UY09 AC021146.9-201ENST00000512503 156 ntBASIC-0.26□□□□□ -2.45
COL28A1Q2UY09 MIR6509-201ENST00000614603 85 ntBASIC-0.26□□□□□ -2.45
COL28A1Q2UY09 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.26□□□□□ -2.45
COL28A1Q2UY09 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.27□□□□□ -2.45
COL28A1Q2UY09 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.27□□□□□ -2.45
COL28A1Q2UY09 MIR203A-201ENST00000384836 110 ntBASIC-0.27□□□□□ -2.45
COL28A1Q2UY09 AL691482.2-201ENST00000457453 84 ntBASIC-0.27□□□□□ -2.45
COL28A1Q2UY09 snoU13.13-201ENST00000458842 104 ntBASIC-0.27□□□□□ -2.45
COL28A1Q2UY09 SNORD126-201ENST00000459475 77 ntBASIC-0.27□□□□□ -2.45
COL28A1Q2UY09 MIR3657-201ENST00000584818 117 ntBASIC-0.27□□□□□ -2.45
COL28A1Q2UY09 MIR6773-201ENST00000612812 74 ntBASIC-0.27□□□□□ -2.45
COL28A1Q2UY09 MIR4788-201ENST00000639104 80 ntBASIC-0.27□□□□□ -2.45
COL28A1Q2UY09 SNORA2.1-201ENST00000363089 137 ntBASIC-0.28□□□□□ -2.45
COL28A1Q2UY09 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.28□□□□□ -2.45
COL28A1Q2UY09 RNU6-337P-201ENST00000391243 106 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms