Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 RNU6-871P-201ENST00000516122 100 ntBASIC0.58□□□□□ -2.32
SCAPQ12770 RNU6-617P-201ENST00000516147 107 ntBASIC0.58□□□□□ -2.32
SCAPQ12770 RNU6-473P-201ENST00000516164 107 ntBASIC0.58□□□□□ -2.32
SCAPQ12770 RNU6-1049P-201ENST00000516414 107 ntBASIC0.58□□□□□ -2.32
SCAPQ12770 RNA5SP285-201ENST00000516619 119 ntBASIC0.58□□□□□ -2.32
SCAPQ12770 SNORA70.25-201ENST00000612741 95 ntBASIC0.58□□□□□ -2.32
SCAPQ12770 RNU6-587P-201ENST00000391282 106 ntBASIC0.57□□□□□ -2.32
SCAPQ12770 MIR4473-201ENST00000583731 91 ntBASIC0.57□□□□□ -2.32
SCAPQ12770 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.57□□□□□ -2.32
SCAPQ12770 Y_RNA.565-201ENST00000384719 101 ntBASIC0.56□□□□□ -2.32
SCAPQ12770 MIR154-201ENST00000385243 84 ntBASIC0.56□□□□□ -2.32
SCAPQ12770 SNORA62.5-201ENST00000516634 120 ntBASIC0.56□□□□□ -2.32
SCAPQ12770 MIR8053-201ENST00000613344 75 ntBASIC0.56□□□□□ -2.32
SCAPQ12770 uc_338.10-201ENST00000621872 182 ntBASIC0.56□□□□□ -2.32
SCAPQ12770 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
SCAPQ12770 Y_RNA.423-201ENST00000384057 113 ntBASIC0.55□□□□□ -2.32
SCAPQ12770 AC243829.6-201ENST00000612652 106 ntBASIC0.55□□□□□ -2.32
SCAPQ12770 SNORD45.1-201ENST00000363181 77 ntBASIC0.54□□□□□ -2.32
SCAPQ12770 RNU6-260P-201ENST00000384092 107 ntBASIC0.54□□□□□ -2.32
SCAPQ12770 RNU6-1241P-201ENST00000384536 107 ntBASIC0.54□□□□□ -2.32
SCAPQ12770 AC073261.1-201ENST00000429409 121 ntBASIC0.54□□□□□ -2.32
SCAPQ12770 MIR4514-201ENST00000581410 57 ntBASIC0.54□□□□□ -2.32
SCAPQ12770 MIR664A-201ENST00000626086 82 ntBASIC0.54□□□□□ -2.32
SCAPQ12770 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.54□□□□□ -2.32
SCAPQ12770 SCARNA17.3-201ENST00000516381 125 ntBASIC0.53□□□□□ -2.32
SCAPQ12770 RNU6-687P-201ENST00000516443 89 ntBASIC0.53□□□□□ -2.32
SCAPQ12770 RNU6-1015P-201ENST00000517121 99 ntBASIC0.53□□□□□ -2.32
SCAPQ12770 RNU1-29P-201ENST00000606574 126 ntBASIC0.53□□□□□ -2.32
SCAPQ12770 SNORA2.1-201ENST00000363089 137 ntBASIC0.52□□□□□ -2.33
SCAPQ12770 Y_RNA.125-201ENST00000363371 111 ntBASIC0.52□□□□□ -2.33
SCAPQ12770 VTRNA1-3-201ENST00000365645 89 ntBASIC0.52□□□□□ -2.33
SCAPQ12770 MIR203A-201ENST00000384836 110 ntBASIC0.52□□□□□ -2.33
SCAPQ12770 RNA5SP63-201ENST00000391225 112 ntBASIC0.52□□□□□ -2.33
SCAPQ12770 MIR3657-201ENST00000584818 117 ntBASIC0.52□□□□□ -2.33
SCAPQ12770 MIR652-201ENST00000385278 98 ntBASIC0.51□□□□□ -2.33
SCAPQ12770 HMGN2P22-201ENST00000427588 175 ntBASIC0.51□□□□□ -2.33
SCAPQ12770 RNU6-634P-201ENST00000459134 106 ntBASIC0.51□□□□□ -2.33
SCAPQ12770 Y_RNA.250-201ENST00000364542 110 ntBASIC0.5□□□□□ -2.33
SCAPQ12770 MIR760-201ENST00000390220 80 ntBASIC0.5□□□□□ -2.33
SCAPQ12770 RNU6-604P-201ENST00000390917 100 ntBASIC0.5□□□□□ -2.33
SCAPQ12770 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
SCAPQ12770 RNU6-523P-201ENST00000516304 54 ntBASIC0.5□□□□□ -2.33
SCAPQ12770 MIR548AE1-201ENST00000583292 70 ntBASIC0.5□□□□□ -2.33
SCAPQ12770 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
SCAPQ12770 RNU6-895P-201ENST00000384125 103 ntBASIC0.49□□□□□ -2.33
SCAPQ12770 SNORA68.3-201ENST00000515906 83 ntBASIC0.49□□□□□ -2.33
SCAPQ12770 MIR6755-201ENST00000619993 66 ntBASIC0.49□□□□□ -2.33
SCAPQ12770 SNORD44.1-201ENST00000363202 61 ntBASIC0.48□□□□□ -2.33
SCAPQ12770 RNU6-990P-201ENST00000364385 104 ntBASIC0.48□□□□□ -2.33
SCAPQ12770 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.48□□□□□ -2.33
SCAPQ12770 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.48□□□□□ -2.33
SCAPQ12770 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
SCAPQ12770 MIR20A-201ENST00000362279 71 ntBASIC0.47□□□□□ -2.33
SCAPQ12770 SNORD114-29-201ENST00000364819 70 ntBASIC0.47□□□□□ -2.33
SCAPQ12770 RNA5SP128-201ENST00000365305 116 ntBASIC0.47□□□□□ -2.33
SCAPQ12770 AC023932.2-201ENST00000603176 175 ntBASIC0.47□□□□□ -2.33
SCAPQ12770 AC244090.1-201ENST00000441884 93 ntBASIC0.46□□□□□ -2.34
SCAPQ12770 RNU6-881P-201ENST00000516813 102 ntBASIC0.46□□□□□ -2.34
SCAPQ12770 MIRLET7D-201ENST00000362263 87 ntBASIC0.45□□□□□ -2.34
SCAPQ12770 SNORD115-22-201ENST00000364456 82 ntBASIC0.45□□□□□ -2.34
SCAPQ12770 SNORA63.6-201ENST00000364921 119 ntBASIC0.45□□□□□ -2.34
SCAPQ12770 SNORD45A-201ENST00000384512 84 ntBASIC0.45□□□□□ -2.34
SCAPQ12770 MIR516B1-201ENST00000385211 90 ntBASIC0.45□□□□□ -2.34
SCAPQ12770 SNORD2-201ENST00000459163 69 ntBASIC0.45□□□□□ -2.34
SCAPQ12770 AC021146.9-201ENST00000512503 156 ntBASIC0.45□□□□□ -2.34
SCAPQ12770 RNU7-129P-201ENST00000516128 62 ntBASIC0.45□□□□□ -2.34
SCAPQ12770 RNA5SP147-201ENST00000516493 109 ntBASIC0.45□□□□□ -2.34
SCAPQ12770 MIR4677-201ENST00000584153 80 ntBASIC0.45□□□□□ -2.34
SCAPQ12770 MIR548AD-201ENST00000584780 82 ntBASIC0.45□□□□□ -2.34
SCAPQ12770 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SCAPQ12770 SNORD113.1-201ENST00000363280 73 ntBASIC0.44□□□□□ -2.34
SCAPQ12770 RNU6-1162P-201ENST00000384443 104 ntBASIC0.44□□□□□ -2.34
SCAPQ12770 MIR501-201ENST00000390204 84 ntBASIC0.44□□□□□ -2.34
SCAPQ12770 MIR1265-201ENST00000408444 86 ntBASIC0.44□□□□□ -2.34
SCAPQ12770 MTND4LP1-201ENST00000446263 157 ntBASIC0.44□□□□□ -2.34
SCAPQ12770 RNU6-1232P-201ENST00000516299 86 ntBASIC0.44□□□□□ -2.34
SCAPQ12770 AC084368.1-201ENST00000620935 65 ntBASIC0.44□□□□□ -2.34
SCAPQ12770 MIR6759-201ENST00000638110 65 ntBASIC0.44□□□□□ -2.34
SCAPQ12770 SNORA9.1-201ENST00000362412 131 ntBASIC0.43□□□□□ -2.34
SCAPQ12770 SNORD115-31-201ENST00000365318 82 ntBASIC0.43□□□□□ -2.34
SCAPQ12770 SNORA15B-2-201ENST00000384058 135 ntBASIC0.43□□□□□ -2.34
SCAPQ12770 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
SCAPQ12770 SNORA15B-1-201ENST00000384334 135 ntBASIC0.43□□□□□ -2.34
SCAPQ12770 AC114801.3-201ENST00000510231 177 ntBASIC0.43□□□□□ -2.34
SCAPQ12770 MIR4636-201ENST00000582271 80 ntBASIC0.43□□□□□ -2.34
SCAPQ12770 AL627230.5-201ENST00000619807 58 ntBASIC0.43□□□□□ -2.34
SCAPQ12770 RNU6-1216P-201ENST00000362590 107 ntBASIC0.42□□□□□ -2.34
SCAPQ12770 RNU6-649P-201ENST00000384463 107 ntBASIC0.42□□□□□ -2.34
SCAPQ12770 SNORD30.1-201ENST00000391309 70 ntBASIC0.42□□□□□ -2.34
SCAPQ12770 MIR548E-201ENST00000408287 88 ntBASIC0.42□□□□□ -2.34
SCAPQ12770 MIR6739-201ENST00000622461 75 ntBASIC0.42□□□□□ -2.34
SCAPQ12770 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.41□□□□□ -2.34
SCAPQ12770 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
SCAPQ12770 RNU6-663P-201ENST00000391105 106 ntBASIC0.41□□□□□ -2.34
SCAPQ12770 SNORA40.17-201ENST00000517256 115 ntBASIC0.41□□□□□ -2.34
SCAPQ12770 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.41□□□□□ -2.34
SCAPQ12770 MIR103A1-201ENST00000362165 78 ntBASIC0.4□□□□□ -2.35
SCAPQ12770 RNU6-540P-201ENST00000384622 101 ntBASIC0.4□□□□□ -2.35
SCAPQ12770 MIR329-2-201ENST00000385029 84 ntBASIC0.4□□□□□ -2.35
SCAPQ12770 RNU6-539P-201ENST00000516665 103 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 208.4 ms