Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC107308.1-201ENST00000615897 301 ntBASIC-1.14□□□□□ -2.59
HSPG2P98160 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.14□□□□□ -2.59
HSPG2P98160 SNORD113-2-201ENST00000391082 72 ntBASIC-1.14□□□□□ -2.59
HSPG2P98160 RNU6-972P-201ENST00000391208 107 ntBASIC-1.14□□□□□ -2.59
HSPG2P98160 MIR3121-201ENST00000579680 77 ntBASIC-1.14□□□□□ -2.59
HSPG2P98160 RNU6-508P-201ENST00000363231 103 ntBASIC-1.14□□□□□ -2.59
HSPG2P98160 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.14□□□□□ -2.59
HSPG2P98160 SNORD113-3-201ENST00000364830 72 ntBASIC-1.14□□□□□ -2.59
HSPG2P98160 SNORD115-31-201ENST00000365318 82 ntBASIC-1.14□□□□□ -2.59
HSPG2P98160 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.15□□□□□ -2.59
HSPG2P98160 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.15□□□□□ -2.59
HSPG2P98160 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.15□□□□□ -2.59
HSPG2P98160 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.15□□□□□ -2.59
HSPG2P98160 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.15□□□□□ -2.59
HSPG2P98160 RNU6-259P-201ENST00000383999 107 ntBASIC-1.15□□□□□ -2.59
HSPG2P98160 RNU6-890P-201ENST00000384121 107 ntBASIC-1.15□□□□□ -2.59
HSPG2P98160 SNORD116-6-201ENST00000384711 96 ntBASIC-1.15□□□□□ -2.59
HSPG2P98160 MIR581-201ENST00000384895 96 ntBASIC-1.15□□□□□ -2.59
HSPG2P98160 RNU6-644P-201ENST00000391155 98 ntBASIC-1.15□□□□□ -2.59
HSPG2P98160 RNA5SP136-201ENST00000410906 107 ntBASIC-1.15□□□□□ -2.59
HSPG2P98160 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.15□□□□□ -2.59
HSPG2P98160 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-1.15□□□□□ -2.59
HSPG2P98160 AC025253.1-201ENST00000613623 543 ntBASIC-1.15□□□□□ -2.59
HSPG2P98160 RNU6-598P-201ENST00000364017 105 ntBASIC-1.15□□□□□ -2.59
HSPG2P98160 SNORD115-37-201ENST00000363768 82 ntBASIC-1.16□□□□□ -2.59
HSPG2P98160 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.16□□□□□ -2.59
HSPG2P98160 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.16□□□□□ -2.59
HSPG2P98160 MIR4439-201ENST00000583746 80 ntBASIC-1.16□□□□□ -2.59
HSPG2P98160 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.16□□□□□ -2.6
HSPG2P98160 SNORD116-2-201ENST00000384274 95 ntBASIC-1.16□□□□□ -2.6
HSPG2P98160 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.16□□□□□ -2.6
HSPG2P98160 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.16□□□□□ -2.6
HSPG2P98160 RNU7-121P-201ENST00000516604 62 ntBASIC-1.16□□□□□ -2.6
HSPG2P98160 MIR3144-201ENST00000579460 79 ntBASIC-1.16□□□□□ -2.6
HSPG2P98160 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.16□□□□□ -2.6
HSPG2P98160 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.16□□□□□ -2.6
HSPG2P98160 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.16□□□□□ -2.6
HSPG2P98160 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 SNORD116-10-201ENST00000363791 102 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 RNU6-310P-201ENST00000384655 107 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 RNU6-768P-201ENST00000384683 107 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 SNORA75.5-201ENST00000391291 81 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 RNU7-30P-201ENST00000516835 62 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 AC130289.1-201ENST00000577321 73 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 MIR4679-2-201ENST00000578358 77 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 MIR548Z-201ENST00000584743 97 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 SNORD116-16-201ENST00000384533 92 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 MIR125B1-201ENST00000385236 88 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 SNORD90-201ENST00000391145 111 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 AL450471.1-201ENST00000447509 127 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 MIR1236-201ENST00000408340 102 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 RNU6-314P-201ENST00000516574 104 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 SNORD114-13-201ENST00000364377 74 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 SNORD58A-201ENST00000383875 65 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 RNU6-523P-201ENST00000516304 54 ntBASIC-1.17□□□□□ -2.6
HSPG2P98160 RNU6-345P-201ENST00000517001 107 ntBASIC-1.18□□□□□ -2.6
HSPG2P98160 MIR5009-201ENST00000578736 100 ntBASIC-1.18□□□□□ -2.6
HSPG2P98160 AC080013.6-201ENST00000606185 215 ntBASIC-1.18□□□□□ -2.6
HSPG2P98160 SNORD45B-201ENST00000364617 72 ntBASIC-1.18□□□□□ -2.6
HSPG2P98160 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.18□□□□□ -2.6
HSPG2P98160 RNU6-816P-201ENST00000390914 107 ntBASIC-1.18□□□□□ -2.6
HSPG2P98160 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.18□□□□□ -2.6
HSPG2P98160 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.18□□□□□ -2.6
HSPG2P98160 RNU7-151P-201ENST00000516930 53 ntBASIC-1.18□□□□□ -2.6
HSPG2P98160 AC113139.1-201ENST00000605049 239 ntBASIC-1.18□□□□□ -2.6
HSPG2P98160 RNU6-780P-201ENST00000391030 104 ntBASIC-1.18□□□□□ -2.6
HSPG2P98160 MIR6844-201ENST00000637122 62 ntBASIC-1.19□□□□□ -2.6
HSPG2P98160 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.19□□□□□ -2.6
HSPG2P98160 SNORD1B-201ENST00000363091 84 ntBASIC-1.19□□□□□ -2.6
HSPG2P98160 Y_RNA.553-201ENST00000384670 102 ntBASIC-1.19□□□□□ -2.6
HSPG2P98160 MIR630-201ENST00000384957 97 ntBASIC-1.19□□□□□ -2.6
HSPG2P98160 AL603755.1-201ENST00000619504 163 ntBASIC-1.19□□□□□ -2.6
HSPG2P98160 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.19□□□□□ -2.6
HSPG2P98160 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.19□□□□□ -2.6
HSPG2P98160 AL731768.1-201ENST00000603124 139 ntBASIC-1.19□□□□□ -2.6
HSPG2P98160 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.19□□□□□ -2.6
HSPG2P98160 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.19□□□□□ -2.6
HSPG2P98160 RNU6-813P-201ENST00000384691 107 ntBASIC-1.19□□□□□ -2.6
HSPG2P98160 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.19□□□□□ -2.6
HSPG2P98160 MIR3611-201ENST00000584484 83 ntBASIC-1.19□□□□□ -2.6
HSPG2P98160 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.2□□□□□ -2.6
HSPG2P98160 SNORA40.15-201ENST00000516884 107 ntBASIC-1.2□□□□□ -2.6
HSPG2P98160 SNORD58B-201ENST00000607313 66 ntBASIC-1.2□□□□□ -2.6
HSPG2P98160 RNU6-668P-201ENST00000364180 107 ntBASIC-1.2□□□□□ -2.6
HSPG2P98160 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.2□□□□□ -2.6
HSPG2P98160 SNORD116-29-201ENST00000384516 83 ntBASIC-1.2□□□□□ -2.6
HSPG2P98160 RNU6-584P-201ENST00000410350 95 ntBASIC-1.2□□□□□ -2.6
HSPG2P98160 MIR5690-201ENST00000583739 73 ntBASIC-1.2□□□□□ -2.6
HSPG2P98160 RNU6-982P-201ENST00000516216 102 ntBASIC-1.2□□□□□ -2.6
HSPG2P98160 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.2□□□□□ -2.6
HSPG2P98160 MIR4694-201ENST00000578534 80 ntBASIC-1.2□□□□□ -2.6
HSPG2P98160 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-1.21□□□□□ -2.6
HSPG2P98160 RNU6-781P-201ENST00000516377 101 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 AC006362.1-201ENST00000567392 174 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 RNA5SP215-201ENST00000363440 122 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 214 ms