Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC069113.3-201ENST00000521019 150 ntBASIC0.36□□□□□ -2.35
CLRN1P58418 MIR1273G-201ENST00000577677 100 ntBASIC0.36□□□□□ -2.35
CLRN1P58418 MIR3675-201ENST00000583661 73 ntBASIC0.36□□□□□ -2.35
CLRN1P58418 AC084368.1-201ENST00000620935 65 ntBASIC0.36□□□□□ -2.35
CLRN1P58418 RNU6-1327P-201ENST00000365302 105 ntBASIC0.35□□□□□ -2.35
CLRN1P58418 RNU6-127P-201ENST00000390897 107 ntBASIC0.35□□□□□ -2.35
CLRN1P58418 MIR3925-201ENST00000584674 77 ntBASIC0.35□□□□□ -2.35
CLRN1P58418 U7.4-201ENST00000614961 63 ntBASIC0.35□□□□□ -2.35
CLRN1P58418 Y_RNA.205-201ENST00000364128 113 ntBASIC0.34□□□□□ -2.36
CLRN1P58418 RNU7-188P-201ENST00000517063 64 ntBASIC0.34□□□□□ -2.36
CLRN1P58418 MIR3657-201ENST00000584818 117 ntBASIC0.34□□□□□ -2.36
CLRN1P58418 AC145423.2-201ENST00000610631 239 ntBASIC0.34□□□□□ -2.36
CLRN1P58418 MIR664A-201ENST00000626086 82 ntBASIC0.34□□□□□ -2.36
CLRN1P58418 MIR20A-201ENST00000362279 71 ntBASIC0.33□□□□□ -2.36
CLRN1P58418 VTRNA1-3-201ENST00000365645 89 ntBASIC0.33□□□□□ -2.36
CLRN1P58418 MIR582-201ENST00000365731 98 ntBASIC0.33□□□□□ -2.36
CLRN1P58418 AC108740.1-201ENST00000498629 225 ntBASIC0.33□□□□□ -2.36
CLRN1P58418 RNU6-638P-201ENST00000516582 104 ntBASIC0.33□□□□□ -2.36
CLRN1P58418 SNORD114-29-201ENST00000364819 70 ntBASIC0.32□□□□□ -2.36
CLRN1P58418 SNORA40.17-201ENST00000517256 115 ntBASIC0.32□□□□□ -2.36
CLRN1P58418 MIR3134-201ENST00000579433 74 ntBASIC0.32□□□□□ -2.36
CLRN1P58418 MIR6779-201ENST00000617283 64 ntBASIC0.32□□□□□ -2.36
CLRN1P58418 MIR924-201ENST00000638017 53 ntBASIC0.32□□□□□ -2.36
CLRN1P58418 MIR643-201ENST00000385267 97 ntBASIC0.31□□□□□ -2.36
CLRN1P58418 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
CLRN1P58418 MIR548E-201ENST00000408287 88 ntBASIC0.31□□□□□ -2.36
CLRN1P58418 AC244090.1-201ENST00000441884 93 ntBASIC0.31□□□□□ -2.36
CLRN1P58418 RNA5SP147-201ENST00000516493 109 ntBASIC0.31□□□□□ -2.36
CLRN1P58418 SCARNA11.2-201ENST00000517183 154 ntBASIC0.31□□□□□ -2.36
CLRN1P58418 SNORA2.1-201ENST00000363089 137 ntBASIC0.3□□□□□ -2.36
CLRN1P58418 MIR889-201ENST00000401280 79 ntBASIC0.3□□□□□ -2.36
CLRN1P58418 RNU6-70P-201ENST00000516438 60 ntBASIC0.3□□□□□ -2.36
CLRN1P58418 Y_RNA.681-201ENST00000516445 113 ntBASIC0.3□□□□□ -2.36
CLRN1P58418 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
CLRN1P58418 SNORA62.5-201ENST00000516634 120 ntBASIC0.3□□□□□ -2.36
CLRN1P58418 RNU6-782P-201ENST00000516852 104 ntBASIC0.3□□□□□ -2.36
CLRN1P58418 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.3□□□□□ -2.36
CLRN1P58418 MIR876-201ENST00000401147 81 ntBASIC0.29□□□□□ -2.36
CLRN1P58418 RNA5SP193-201ENST00000410353 107 ntBASIC0.29□□□□□ -2.36
CLRN1P58418 snoU13.13-201ENST00000458842 104 ntBASIC0.29□□□□□ -2.36
CLRN1P58418 SNORD45.1-201ENST00000363181 77 ntBASIC0.28□□□□□ -2.36
CLRN1P58418 RNU6-175P-201ENST00000516896 107 ntBASIC0.28□□□□□ -2.36
CLRN1P58418 RN7SL660P-201ENST00000614852 299 ntBASIC0.28□□□□□ -2.36
CLRN1P58418 MIR4315-1-201ENST00000636800 73 ntBASIC0.28□□□□□ -2.36
CLRN1P58418 MIR4662A-201ENST00000637499 67 ntBASIC0.28□□□□□ -2.36
CLRN1P58418 MIR4315-2-201ENST00000640925 73 ntBASIC0.28□□□□□ -2.36
CLRN1P58418 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.27□□□□□ -2.37
CLRN1P58418 SNORA75.1-201ENST00000391130 148 ntBASIC0.27□□□□□ -2.37
CLRN1P58418 AC021146.9-201ENST00000512503 156 ntBASIC0.27□□□□□ -2.37
CLRN1P58418 RNU6-776P-201ENST00000364403 104 ntBASIC0.26□□□□□ -2.37
CLRN1P58418 SNORA63.6-201ENST00000364921 119 ntBASIC0.26□□□□□ -2.37
CLRN1P58418 RNU6-1022P-201ENST00000365049 104 ntBASIC0.26□□□□□ -2.37
CLRN1P58418 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
CLRN1P58418 RNU6-604P-201ENST00000390917 100 ntBASIC0.25□□□□□ -2.37
CLRN1P58418 MIR8087-201ENST00000612745 78 ntBASIC0.25□□□□□ -2.37
CLRN1P58418 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
CLRN1P58418 MIR330-201ENST00000362196 94 ntBASIC0.24□□□□□ -2.37
CLRN1P58418 RNA5SP325-201ENST00000363756 130 ntBASIC0.24□□□□□ -2.37
CLRN1P58418 RNU6-411P-201ENST00000384451 107 ntBASIC0.24□□□□□ -2.37
CLRN1P58418 RNU6-1241P-201ENST00000384536 107 ntBASIC0.24□□□□□ -2.37
CLRN1P58418 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.24□□□□□ -2.37
CLRN1P58418 MIR548H2-201ENST00000408874 88 ntBASIC0.23□□□□□ -2.37
CLRN1P58418 Y_RNA.633-201ENST00000459107 95 ntBASIC0.23□□□□□ -2.37
CLRN1P58418 SNORD115-22-201ENST00000364456 82 ntBASIC0.22□□□□□ -2.37
CLRN1P58418 Y_RNA.250-201ENST00000364542 110 ntBASIC0.22□□□□□ -2.37
CLRN1P58418 RNU6-1036P-201ENST00000383959 104 ntBASIC0.22□□□□□ -2.37
CLRN1P58418 RNU6-587P-201ENST00000391282 106 ntBASIC0.22□□□□□ -2.37
CLRN1P58418 RNU6-687P-201ENST00000516443 89 ntBASIC0.22□□□□□ -2.37
CLRN1P58418 AC104408.1-201ENST00000605241 170 ntBASIC0.22□□□□□ -2.37
CLRN1P58418 MIR154-201ENST00000385243 84 ntBASIC0.21□□□□□ -2.38
CLRN1P58418 SNORD2-201ENST00000459163 69 ntBASIC0.21□□□□□ -2.38
CLRN1P58418 RNU6-1015P-201ENST00000517121 99 ntBASIC0.21□□□□□ -2.38
CLRN1P58418 MIR8053-201ENST00000613344 75 ntBASIC0.21□□□□□ -2.38
CLRN1P58418 RNA5SP457-201ENST00000363657 124 ntBASIC0.2□□□□□ -2.38
CLRN1P58418 MIR610-201ENST00000385139 96 ntBASIC0.2□□□□□ -2.38
CLRN1P58418 SNORA49-201ENST00000386157 136 ntBASIC0.2□□□□□ -2.38
CLRN1P58418 MIR6739-201ENST00000622461 75 ntBASIC0.2□□□□□ -2.38
CLRN1P58418 Y_RNA.115-201ENST00000363272 98 ntBASIC0.19□□□□□ -2.38
CLRN1P58418 RNA5SP214-201ENST00000363378 118 ntBASIC0.19□□□□□ -2.38
CLRN1P58418 SNORA42.1-201ENST00000363515 137 ntBASIC0.19□□□□□ -2.38
CLRN1P58418 SNORD45A-201ENST00000384512 84 ntBASIC0.19□□□□□ -2.38
CLRN1P58418 Y_RNA.545-201ENST00000384652 105 ntBASIC0.19□□□□□ -2.38
CLRN1P58418 MIR593-201ENST00000384856 100 ntBASIC0.19□□□□□ -2.38
CLRN1P58418 RNA5SP163-201ENST00000410304 99 ntBASIC0.19□□□□□ -2.38
CLRN1P58418 RNU6-523P-201ENST00000516304 54 ntBASIC0.19□□□□□ -2.38
CLRN1P58418 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
CLRN1P58418 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
CLRN1P58418 SNORA15B-2-201ENST00000384058 135 ntBASIC0.18□□□□□ -2.38
CLRN1P58418 SNORA15B-1-201ENST00000384334 135 ntBASIC0.18□□□□□ -2.38
CLRN1P58418 RNU6-1162P-201ENST00000384443 104 ntBASIC0.18□□□□□ -2.38
CLRN1P58418 MIR106A-201ENST00000384870 81 ntBASIC0.18□□□□□ -2.38
CLRN1P58418 MIR892B-201ENST00000401279 77 ntBASIC0.18□□□□□ -2.38
CLRN1P58418 RNU6-982P-201ENST00000516216 102 ntBASIC0.18□□□□□ -2.38
CLRN1P58418 MIR4514-201ENST00000581410 57 ntBASIC0.18□□□□□ -2.38
CLRN1P58418 AC023932.2-201ENST00000603176 175 ntBASIC0.18□□□□□ -2.38
CLRN1P58418 MIR6514-201ENST00000622549 70 ntBASIC0.18□□□□□ -2.38
CLRN1P58418 RNU6-645P-201ENST00000364649 106 ntBASIC0.17□□□□□ -2.38
CLRN1P58418 SNORA33.1-201ENST00000364957 130 ntBASIC0.17□□□□□ -2.38
CLRN1P58418 Y_RNA.565-201ENST00000384719 101 ntBASIC0.17□□□□□ -2.38
CLRN1P58418 MIR521-2-201ENST00000384818 87 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 210.6 ms