Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MIR582-201ENST00000365731 98 ntBASIC0.49□□□□□ -2.33
PMS1P54277 RNU7-188P-201ENST00000517063 64 ntBASIC0.49□□□□□ -2.33
PMS1P54277 SNORA40.17-201ENST00000517256 115 ntBASIC0.49□□□□□ -2.33
PMS1P54277 AC090625.1-201ENST00000357130 210 ntBASIC0.48□□□□□ -2.33
PMS1P54277 Y_RNA.224-201ENST00000364308 111 ntBASIC0.48□□□□□ -2.33
PMS1P54277 SNORD115-22-201ENST00000364456 82 ntBASIC0.48□□□□□ -2.33
PMS1P54277 Y_RNA.250-201ENST00000364542 110 ntBASIC0.48□□□□□ -2.33
PMS1P54277 SNORD45A-201ENST00000384512 84 ntBASIC0.48□□□□□ -2.33
PMS1P54277 MIR548E-201ENST00000408287 88 ntBASIC0.48□□□□□ -2.33
PMS1P54277 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.48□□□□□ -2.33
PMS1P54277 snoU13.13-201ENST00000458842 104 ntBASIC0.48□□□□□ -2.33
PMS1P54277 RNU6-815P-201ENST00000384080 113 ntBASIC0.47□□□□□ -2.33
PMS1P54277 RNU6-895P-201ENST00000384125 103 ntBASIC0.47□□□□□ -2.33
PMS1P54277 RNU6-634P-201ENST00000459134 106 ntBASIC0.47□□□□□ -2.33
PMS1P54277 RNA5SP347-201ENST00000362445 119 ntBASIC0.46□□□□□ -2.34
PMS1P54277 RNU6-1223P-201ENST00000517124 104 ntBASIC0.46□□□□□ -2.34
PMS1P54277 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
PMS1P54277 RNU6-881P-201ENST00000516813 102 ntBASIC0.45□□□□□ -2.34
PMS1P54277 RNU6-1327P-201ENST00000365302 105 ntBASIC0.44□□□□□ -2.34
PMS1P54277 SNORD115-31-201ENST00000365318 82 ntBASIC0.44□□□□□ -2.34
PMS1P54277 MIR3925-201ENST00000584674 77 ntBASIC0.44□□□□□ -2.34
PMS1P54277 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.44□□□□□ -2.34
PMS1P54277 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.43□□□□□ -2.34
PMS1P54277 SNORD113.1-201ENST00000363280 73 ntBASIC0.43□□□□□ -2.34
PMS1P54277 SNORA15B-2-201ENST00000384058 135 ntBASIC0.43□□□□□ -2.34
PMS1P54277 SNORA15B-1-201ENST00000384334 135 ntBASIC0.43□□□□□ -2.34
PMS1P54277 RNU6-1162P-201ENST00000384443 104 ntBASIC0.43□□□□□ -2.34
PMS1P54277 RNU6-127P-201ENST00000390897 107 ntBASIC0.43□□□□□ -2.34
PMS1P54277 SNORA75.1-201ENST00000391130 148 ntBASIC0.43□□□□□ -2.34
PMS1P54277 SNORD2-201ENST00000459163 69 ntBASIC0.43□□□□□ -2.34
PMS1P54277 AC069113.3-201ENST00000521019 150 ntBASIC0.43□□□□□ -2.34
PMS1P54277 Y_RNA.226-201ENST00000364337 114 ntBASIC0.42□□□□□ -2.34
PMS1P54277 SCARNA11.2-201ENST00000517183 154 ntBASIC0.42□□□□□ -2.34
PMS1P54277 MIR6739-201ENST00000622461 75 ntBASIC0.42□□□□□ -2.34
PMS1P54277 RNU6-645P-201ENST00000364649 106 ntBASIC0.41□□□□□ -2.34
PMS1P54277 MIR876-201ENST00000401147 81 ntBASIC0.41□□□□□ -2.34
PMS1P54277 MIR1287-201ENST00000408492 90 ntBASIC0.41□□□□□ -2.34
PMS1P54277 MTND4LP1-201ENST00000446263 157 ntBASIC0.41□□□□□ -2.34
PMS1P54277 RNU6-982P-201ENST00000516216 102 ntBASIC0.41□□□□□ -2.34
PMS1P54277 RNA5SP220-201ENST00000516298 104 ntBASIC0.41□□□□□ -2.34
PMS1P54277 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.4□□□□□ -2.35
PMS1P54277 RNU6-782P-201ENST00000516852 104 ntBASIC0.4□□□□□ -2.35
PMS1P54277 MIR6513-201ENST00000621188 64 ntBASIC0.4□□□□□ -2.35
PMS1P54277 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.39□□□□□ -2.35
PMS1P54277 MIR521-2-201ENST00000384818 87 ntBASIC0.39□□□□□ -2.35
PMS1P54277 MIR643-201ENST00000385267 97 ntBASIC0.39□□□□□ -2.35
PMS1P54277 RNA5SP193-201ENST00000410353 107 ntBASIC0.39□□□□□ -2.35
PMS1P54277 RNA5SP247-201ENST00000411181 105 ntBASIC0.39□□□□□ -2.35
PMS1P54277 Y_RNA.633-201ENST00000459107 95 ntBASIC0.39□□□□□ -2.35
PMS1P54277 RNA5SP436-201ENST00000516020 115 ntBASIC0.39□□□□□ -2.35
PMS1P54277 RNU6-1216P-201ENST00000362590 107 ntBASIC0.38□□□□□ -2.35
PMS1P54277 SNORD30.1-201ENST00000391309 70 ntBASIC0.38□□□□□ -2.35
PMS1P54277 RNU6-175P-201ENST00000516896 107 ntBASIC0.38□□□□□ -2.35
PMS1P54277 RN7SL660P-201ENST00000614852 299 ntBASIC0.38□□□□□ -2.35
PMS1P54277 MIR6734-201ENST00000621166 68 ntBASIC0.38□□□□□ -2.35
PMS1P54277 MIR5087-201ENST00000635826 76 ntBASIC0.38□□□□□ -2.35
PMS1P54277 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
PMS1P54277 RNU6-540P-201ENST00000384622 101 ntBASIC0.37□□□□□ -2.35
PMS1P54277 AC108740.1-201ENST00000498629 225 ntBASIC0.37□□□□□ -2.35
PMS1P54277 AC243829.3-201ENST00000622177 108 ntBASIC0.37□□□□□ -2.35
PMS1P54277 RNU6-1036P-201ENST00000383959 104 ntBASIC0.36□□□□□ -2.35
PMS1P54277 RNU6-649P-201ENST00000384463 107 ntBASIC0.36□□□□□ -2.35
PMS1P54277 RNU6-663P-201ENST00000391105 106 ntBASIC0.36□□□□□ -2.35
PMS1P54277 RNA5SP134-201ENST00000516492 96 ntBASIC0.36□□□□□ -2.35
PMS1P54277 AC243829.6-201ENST00000612652 106 ntBASIC0.36□□□□□ -2.35
PMS1P54277 U6.96-201ENST00000636425 70 ntBASIC0.36□□□□□ -2.35
PMS1P54277 MIR4315-1-201ENST00000636800 73 ntBASIC0.36□□□□□ -2.35
PMS1P54277 MIR4315-2-201ENST00000640925 73 ntBASIC0.36□□□□□ -2.35
PMS1P54277 SNORA33.1-201ENST00000364957 130 ntBASIC0.35□□□□□ -2.35
PMS1P54277 RNU6-656P-201ENST00000516785 107 ntBASIC0.35□□□□□ -2.35
PMS1P54277 MIR4711-201ENST00000578274 70 ntBASIC0.35□□□□□ -2.35
PMS1P54277 RNU6-668P-201ENST00000364180 107 ntBASIC0.34□□□□□ -2.36
PMS1P54277 RNU6-42P-201ENST00000384165 107 ntBASIC0.34□□□□□ -2.36
PMS1P54277 MIR936-201ENST00000401264 98 ntBASIC0.33□□□□□ -2.36
PMS1P54277 AC114801.3-201ENST00000510231 177 ntBASIC0.33□□□□□ -2.36
PMS1P54277 RNA5SP325-201ENST00000363756 130 ntBASIC0.32□□□□□ -2.36
PMS1P54277 AC022709.1-201ENST00000615967 87 ntBASIC0.32□□□□□ -2.36
PMS1P54277 SNORA49-201ENST00000386157 136 ntBASIC0.31□□□□□ -2.36
PMS1P54277 VTRNA1-3-201ENST00000365645 89 ntBASIC0.3□□□□□ -2.36
PMS1P54277 SNORD116-24-201ENST00000384549 92 ntBASIC0.3□□□□□ -2.36
PMS1P54277 MIR548C-201ENST00000384815 97 ntBASIC0.3□□□□□ -2.36
PMS1P54277 MIR610-201ENST00000385139 96 ntBASIC0.3□□□□□ -2.36
PMS1P54277 MIR892B-201ENST00000401279 77 ntBASIC0.3□□□□□ -2.36
PMS1P54277 RNU6-539P-201ENST00000516665 103 ntBASIC0.3□□□□□ -2.36
PMS1P54277 MIR106A-201ENST00000384870 81 ntBASIC0.29□□□□□ -2.36
PMS1P54277 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.29□□□□□ -2.36
PMS1P54277 MIR6514-201ENST00000622549 70 ntBASIC0.29□□□□□ -2.36
PMS1P54277 SNORD115-25-201ENST00000362619 82 ntBASIC0.28□□□□□ -2.36
PMS1P54277 U6.111-201ENST00000636093 83 ntBASIC0.28□□□□□ -2.36
PMS1P54277 RNA5SP98-201ENST00000363158 137 ntBASIC0.27□□□□□ -2.37
PMS1P54277 RNU6-630P-201ENST00000391258 106 ntBASIC0.27□□□□□ -2.37
PMS1P54277 RNA5SP163-201ENST00000410304 99 ntBASIC0.27□□□□□ -2.37
PMS1P54277 AC104408.1-201ENST00000605241 170 ntBASIC0.27□□□□□ -2.37
PMS1P54277 Y_RNA.443-201ENST00000384135 111 ntBASIC0.26□□□□□ -2.37
PMS1P54277 MIR593-201ENST00000384856 100 ntBASIC0.26□□□□□ -2.37
PMS1P54277 AP000676.1-201ENST00000533307 52 ntBASIC0.26□□□□□ -2.37
PMS1P54277 MIR6773-201ENST00000612812 74 ntBASIC0.26□□□□□ -2.37
PMS1P54277 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
PMS1P54277 RNU6-1089P-201ENST00000516473 104 ntBASIC0.25□□□□□ -2.37
PMS1P54277 MIR6515-201ENST00000619843 57 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 275.3 ms