Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 SNORD114-28-201ENST00000363610 72 ntBASIC-0.38□□□□□ -2.47
LIG4P49917 RNU6-260P-201ENST00000384092 107 ntBASIC-0.38□□□□□ -2.47
LIG4P49917 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
LIG4P49917 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
LIG4P49917 MIR548M-201ENST00000408260 86 ntBASIC-0.38□□□□□ -2.47
LIG4P49917 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.38□□□□□ -2.47
LIG4P49917 RNU6-479P-201ENST00000516348 105 ntBASIC-0.38□□□□□ -2.47
LIG4P49917 MIR450A1-201ENST00000362262 91 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 RNU6-219P-201ENST00000364728 107 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 SNORA33.1-201ENST00000364957 130 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 MIR488-201ENST00000365739 83 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 SNORA32.3-201ENST00000384772 121 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 MIR1302-5-201ENST00000408164 150 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 RPS29P8-201ENST00000445109 171 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 MIR548AG1-201ENST00000579932 66 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 YWHAEP3-201ENST00000582767 121 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 RNU6-640P-201ENST00000363693 105 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 MTATP6P29-201ENST00000415057 132 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 SNORD2-201ENST00000459163 69 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.4□□□□□ -2.47
LIG4P49917 AC021146.9-201ENST00000512503 156 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 SNORD22.1-201ENST00000516331 125 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 RNA5SP147-201ENST00000516493 109 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 RNU6-267P-201ENST00000516714 103 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 MIR8064-201ENST00000612863 90 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 MIR6854-201ENST00000614935 69 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 AP001318.4-201ENST00000616637 121 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 MIR6888-201ENST00000621977 67 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 MIR4773-1-201ENST00000637203 78 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 RNU6-633P-201ENST00000362612 103 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 RNU6-624P-201ENST00000363411 107 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 RNU6-755P-201ENST00000364400 103 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 SNORA3B-201ENST00000391305 131 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.41□□□□□ -2.48
LIG4P49917 MIR4493-201ENST00000584016 73 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
LIG4P49917 MIR6509-201ENST00000614603 85 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 MIR548AZ-201ENST00000616567 95 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 MIR6086-201ENST00000638065 55 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 AC132825.6-201ENST00000638861 357 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.42□□□□□ -2.48
LIG4P49917 RNU6-340P-201ENST00000364005 107 ntBASIC-0.42□□□□□ -2.48
LIG4P49917 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.42□□□□□ -2.48
LIG4P49917 RNU6-901P-201ENST00000384593 106 ntBASIC-0.42□□□□□ -2.48
LIG4P49917 MIR1236-201ENST00000408340 102 ntBASIC-0.42□□□□□ -2.48
LIG4P49917 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.42□□□□□ -2.48
LIG4P49917 AC006254.2-201ENST00000603259 279 ntBASIC-0.42□□□□□ -2.48
LIG4P49917 SNORA2.1-201ENST00000363089 137 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 RNU6-215P-201ENST00000365169 102 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 MIR518B-201ENST00000385127 83 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 RNU2-51P-201ENST00000410708 197 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 CYP3A54P-201ENST00000566950 75 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 AC140658.3-201ENST00000567603 271 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 MIR4668-201ENST00000582284 70 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 AL353803.5-201ENST00000599815 141 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 AL445584.3-201ENST00000617173 78 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 MIR6739-201ENST00000622461 75 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 RNU6-330P-201ENST00000363015 107 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 RNY4P3-201ENST00000365254 95 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 SNORD75.1-201ENST00000408373 60 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 MIR1255B2-201ENST00000408618 67 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 RNU6-758P-201ENST00000516292 89 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 MIR3179-1-201ENST00000578940 84 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 MIR3179-2-201ENST00000579107 84 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 MIR3179-3-201ENST00000579566 84 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 MIR3179-4-201ENST00000617599 84 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.44□□□□□ -2.48
LIG4P49917 MIR101-1-201ENST00000362265 75 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 SNORA63.4-201ENST00000362763 126 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 RNU6-478P-201ENST00000363904 110 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 RNA5SP368-201ENST00000364298 116 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 RNU6-431P-201ENST00000383874 107 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 SNORD20-201ENST00000384550 80 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 RNY1P7-201ENST00000384743 110 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 MIR604-201ENST00000384880 94 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 MIR519C-201ENST00000385053 87 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 Z95118.1-201ENST00000421372 247 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 RNU6-313P-201ENST00000516317 112 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 RNU6-656P-201ENST00000516785 107 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 RNU6-881P-201ENST00000516813 102 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 MALAT1.1-201ENST00000618249 95 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 U6.96-201ENST00000636425 70 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 RNU6-208P-201ENST00000362431 107 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 RNU5F-1-201ENST00000362507 117 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 RNU6-147P-201ENST00000383983 107 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 205.3 ms