Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 snoU13.13-201ENST00000458842 104 ntBASIC0.55□□□□□ -2.32
THBS3P49746 AL590095.2-201ENST00000604136 117 ntBASIC0.55□□□□□ -2.32
THBS3P49746 AC005520.4-201ENST00000604337 90 ntBASIC0.55□□□□□ -2.32
THBS3P49746 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
THBS3P49746 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
THBS3P49746 RNU6-471P-201ENST00000383944 106 ntBASIC0.54□□□□□ -2.32
THBS3P49746 Y_RNA.443-201ENST00000384135 111 ntBASIC0.54□□□□□ -2.32
THBS3P49746 RNU6-110P-201ENST00000384508 104 ntBASIC0.54□□□□□ -2.32
THBS3P49746 MIR193B-201ENST00000384907 83 ntBASIC0.54□□□□□ -2.32
THBS3P49746 RNU6-630P-201ENST00000391258 106 ntBASIC0.54□□□□□ -2.32
THBS3P49746 AC125388.1-201ENST00000459631 156 ntBASIC0.54□□□□□ -2.32
THBS3P49746 SNORA25.4-201ENST00000363666 124 ntBASIC0.53□□□□□ -2.32
THBS3P49746 RNU6-645P-201ENST00000364649 106 ntBASIC0.53□□□□□ -2.32
THBS3P49746 Y_RNA.340-201ENST00000365330 92 ntBASIC0.53□□□□□ -2.32
THBS3P49746 Y_RNA.423-201ENST00000384057 113 ntBASIC0.53□□□□□ -2.32
THBS3P49746 MIR518A1-201ENST00000385068 85 ntBASIC0.53□□□□□ -2.32
THBS3P49746 RNU6-1232P-201ENST00000516299 86 ntBASIC0.53□□□□□ -2.32
THBS3P49746 SCARNA17.3-201ENST00000516381 125 ntBASIC0.53□□□□□ -2.32
THBS3P49746 AL109933.3-201ENST00000619095 188 ntBASIC0.53□□□□□ -2.32
THBS3P49746 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
THBS3P49746 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.53□□□□□ -2.32
THBS3P49746 MIR582-201ENST00000365731 98 ntBASIC0.52□□□□□ -2.33
THBS3P49746 SNORD71-201ENST00000411292 86 ntBASIC0.52□□□□□ -2.33
THBS3P49746 MIR1273G-201ENST00000577677 100 ntBASIC0.52□□□□□ -2.33
THBS3P49746 MIR6513-201ENST00000621188 64 ntBASIC0.52□□□□□ -2.33
THBS3P49746 MIR6739-201ENST00000622461 75 ntBASIC0.52□□□□□ -2.33
THBS3P49746 Y_RNA.374-201ENST00000365606 101 ntBASIC0.51□□□□□ -2.33
THBS3P49746 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
THBS3P49746 MIR548E-201ENST00000408287 88 ntBASIC0.51□□□□□ -2.33
THBS3P49746 AC021146.9-201ENST00000512503 156 ntBASIC0.51□□□□□ -2.33
THBS3P49746 RNU6-656P-201ENST00000516785 107 ntBASIC0.51□□□□□ -2.33
THBS3P49746 MIR6755-201ENST00000619993 66 ntBASIC0.51□□□□□ -2.33
THBS3P49746 Y_RNA.125-201ENST00000363371 111 ntBASIC0.5□□□□□ -2.33
THBS3P49746 Y_RNA.250-201ENST00000364542 110 ntBASIC0.5□□□□□ -2.33
THBS3P49746 MTND4LP1-201ENST00000446263 157 ntBASIC0.5□□□□□ -2.33
THBS3P49746 RNU6-229P-201ENST00000516614 102 ntBASIC0.5□□□□□ -2.33
THBS3P49746 MIR5706-201ENST00000579841 80 ntBASIC0.5□□□□□ -2.33
THBS3P49746 uc_338.10-201ENST00000621872 182 ntBASIC0.5□□□□□ -2.33
THBS3P49746 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
THBS3P49746 Y_RNA.30-201ENST00000362572 97 ntBASIC0.49□□□□□ -2.33
THBS3P49746 SNORD114-23-201ENST00000363536 72 ntBASIC0.49□□□□□ -2.33
THBS3P49746 RNU6-668P-201ENST00000364180 107 ntBASIC0.49□□□□□ -2.33
THBS3P49746 SNORA2A-201ENST00000383885 135 ntBASIC0.49□□□□□ -2.33
THBS3P49746 RNU6-945P-201ENST00000383947 107 ntBASIC0.49□□□□□ -2.33
THBS3P49746 AC098934.3-201ENST00000430450 190 ntBASIC0.49□□□□□ -2.33
THBS3P49746 RNA5SP347-201ENST00000362445 119 ntBASIC0.48□□□□□ -2.33
THBS3P49746 SNORA63.6-201ENST00000364921 119 ntBASIC0.48□□□□□ -2.33
THBS3P49746 MIR4511-201ENST00000582784 87 ntBASIC0.48□□□□□ -2.33
THBS3P49746 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.48□□□□□ -2.33
THBS3P49746 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
THBS3P49746 Y_RNA.375-201ENST00000365625 101 ntBASIC0.47□□□□□ -2.33
THBS3P49746 MIR521-2-201ENST00000384818 87 ntBASIC0.47□□□□□ -2.33
THBS3P49746 MIR501-201ENST00000390204 84 ntBASIC0.47□□□□□ -2.33
THBS3P49746 MIR936-201ENST00000401264 98 ntBASIC0.47□□□□□ -2.33
THBS3P49746 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
THBS3P49746 Y_RNA.633-201ENST00000459107 95 ntBASIC0.47□□□□□ -2.33
THBS3P49746 AC103706.3-201ENST00000636297 85 ntBASIC0.47□□□□□ -2.33
THBS3P49746 SNORA33.1-201ENST00000364957 130 ntBASIC0.46□□□□□ -2.34
THBS3P49746 RNU6-1162P-201ENST00000384443 104 ntBASIC0.46□□□□□ -2.34
THBS3P49746 MIR516B1-201ENST00000385211 90 ntBASIC0.46□□□□□ -2.34
THBS3P49746 MIR760-201ENST00000390220 80 ntBASIC0.46□□□□□ -2.34
THBS3P49746 MIR5087-201ENST00000635826 76 ntBASIC0.46□□□□□ -2.34
THBS3P49746 RNU6-542P-201ENST00000516405 103 ntBASIC0.45□□□□□ -2.34
THBS3P49746 RNU7-188P-201ENST00000517063 64 ntBASIC0.45□□□□□ -2.34
THBS3P49746 MIR4677-201ENST00000584153 80 ntBASIC0.45□□□□□ -2.34
THBS3P49746 U7.6-201ENST00000610841 64 ntBASIC0.45□□□□□ -2.34
THBS3P49746 AC010487.4-201ENST00000637027 61 ntBASIC0.45□□□□□ -2.34
THBS3P49746 MIR924-201ENST00000638017 53 ntBASIC0.45□□□□□ -2.34
THBS3P49746 SNORD44.1-201ENST00000363202 61 ntBASIC0.44□□□□□ -2.34
THBS3P49746 Y_RNA.115-201ENST00000363272 98 ntBASIC0.44□□□□□ -2.34
THBS3P49746 RNA5SP215-201ENST00000363440 122 ntBASIC0.44□□□□□ -2.34
THBS3P49746 SNORA15B-2-201ENST00000384058 135 ntBASIC0.44□□□□□ -2.34
THBS3P49746 SNORA15B-1-201ENST00000384334 135 ntBASIC0.44□□□□□ -2.34
THBS3P49746 SNORA68.3-201ENST00000515906 83 ntBASIC0.44□□□□□ -2.34
THBS3P49746 RNU6-848P-201ENST00000515948 107 ntBASIC0.44□□□□□ -2.34
THBS3P49746 RNU6-617P-201ENST00000516147 107 ntBASIC0.44□□□□□ -2.34
THBS3P49746 RNU6-473P-201ENST00000516164 107 ntBASIC0.44□□□□□ -2.34
THBS3P49746 RNU6-1049P-201ENST00000516414 107 ntBASIC0.44□□□□□ -2.34
THBS3P49746 RNU6-1089P-201ENST00000516473 104 ntBASIC0.44□□□□□ -2.34
THBS3P49746 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
THBS3P49746 MIR20A-201ENST00000362279 71 ntBASIC0.43□□□□□ -2.34
THBS3P49746 MIR9-2-201ENST00000384838 87 ntBASIC0.43□□□□□ -2.34
THBS3P49746 AC110620.1-201ENST00000416042 228 ntBASIC0.43□□□□□ -2.34
THBS3P49746 AC244090.1-201ENST00000441884 93 ntBASIC0.43□□□□□ -2.34
THBS3P49746 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.43□□□□□ -2.34
THBS3P49746 RNU7-129P-201ENST00000516128 62 ntBASIC0.43□□□□□ -2.34
THBS3P49746 RNA5SP121-201ENST00000516537 101 ntBASIC0.43□□□□□ -2.34
THBS3P49746 MIR4711-201ENST00000578274 70 ntBASIC0.43□□□□□ -2.34
THBS3P49746 AC243829.3-201ENST00000622177 108 ntBASIC0.43□□□□□ -2.34
THBS3P49746 MIR499B-201ENST00000636498 73 ntBASIC0.43□□□□□ -2.34
THBS3P49746 MIR103A1-201ENST00000362165 78 ntBASIC0.42□□□□□ -2.34
THBS3P49746 SNORD114-29-201ENST00000364819 70 ntBASIC0.42□□□□□ -2.34
THBS3P49746 RNA5SP128-201ENST00000365305 116 ntBASIC0.42□□□□□ -2.34
THBS3P49746 RNU6-669P-201ENST00000365575 107 ntBASIC0.42□□□□□ -2.34
THBS3P49746 MIR548AD-201ENST00000584780 82 ntBASIC0.42□□□□□ -2.34
THBS3P49746 RNA5SP499-201ENST00000363982 119 ntBASIC0.41□□□□□ -2.34
THBS3P49746 MIR548C-201ENST00000384815 97 ntBASIC0.41□□□□□ -2.34
THBS3P49746 RNA5SP193-201ENST00000410353 107 ntBASIC0.41□□□□□ -2.34
THBS3P49746 RNU6-175P-201ENST00000516896 107 ntBASIC0.41□□□□□ -2.34
THBS3P49746 MIR3925-201ENST00000584674 77 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 219.1 ms