Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 MIR147A-201ENST00000385079 72 ntBASIC-0.53□□□□□ -2.49
LHX1P48742 RNU6-554P-201ENST00000410466 106 ntBASIC-0.53□□□□□ -2.49
LHX1P48742 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.53□□□□□ -2.49
LHX1P48742 AC021146.9-201ENST00000512503 156 ntBASIC-0.53□□□□□ -2.49
LHX1P48742 RNU6-109P-201ENST00000516364 107 ntBASIC-0.53□□□□□ -2.49
LHX1P48742 RNU6-184P-201ENST00000516514 107 ntBASIC-0.53□□□□□ -2.49
LHX1P48742 MIR6129-201ENST00000616087 109 ntBASIC-0.53□□□□□ -2.49
LHX1P48742 MIR6888-201ENST00000621977 67 ntBASIC-0.53□□□□□ -2.49
LHX1P48742 RNU6-260P-201ENST00000384092 107 ntBASIC-0.54□□□□□ -2.5
LHX1P48742 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.54□□□□□ -2.5
LHX1P48742 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.54□□□□□ -2.5
LHX1P48742 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.54□□□□□ -2.5
LHX1P48742 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.55□□□□□ -2.5
LHX1P48742 SNORA33.1-201ENST00000364957 130 ntBASIC-0.55□□□□□ -2.5
LHX1P48742 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.55□□□□□ -2.5
LHX1P48742 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.55□□□□□ -2.5
LHX1P48742 RNU6-22P-201ENST00000384355 107 ntBASIC-0.55□□□□□ -2.5
LHX1P48742 SNORA19-201ENST00000384737 128 ntBASIC-0.55□□□□□ -2.5
LHX1P48742 SNORD64-201ENST00000386683 67 ntBASIC-0.55□□□□□ -2.5
LHX1P48742 MIR196A1-201ENST00000388006 70 ntBASIC-0.55□□□□□ -2.5
LHX1P48742 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.55□□□□□ -2.5
LHX1P48742 RNU6-162P-201ENST00000516228 103 ntBASIC-0.55□□□□□ -2.5
LHX1P48742 MIR4802-201ENST00000581881 80 ntBASIC-0.55□□□□□ -2.5
LHX1P48742 AL353803.5-201ENST00000599815 141 ntBASIC-0.55□□□□□ -2.5
LHX1P48742 AC006254.2-201ENST00000603259 279 ntBASIC-0.55□□□□□ -2.5
LHX1P48742 AL445584.3-201ENST00000617173 78 ntBASIC-0.55□□□□□ -2.5
LHX1P48742 RNU6-834P-201ENST00000362367 110 ntBASIC-0.56□□□□□ -2.5
LHX1P48742 RNU6-208P-201ENST00000362431 107 ntBASIC-0.56□□□□□ -2.5
LHX1P48742 RNU5F-1-201ENST00000362507 117 ntBASIC-0.56□□□□□ -2.5
LHX1P48742 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.56□□□□□ -2.5
LHX1P48742 MIR4796-201ENST00000580742 81 ntBASIC-0.56□□□□□ -2.5
LHX1P48742 MIR3657-201ENST00000584818 117 ntBASIC-0.56□□□□□ -2.5
LHX1P48742 U6.81-201ENST00000612550 106 ntBASIC-0.56□□□□□ -2.5
LHX1P48742 U7.3-201ENST00000616123 62 ntBASIC-0.56□□□□□ -2.5
LHX1P48742 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.56□□□□□ -2.5
LHX1P48742 snoR1.1-201ENST00000628177 80 ntBASIC-0.56□□□□□ -2.5
LHX1P48742 U6.96-201ENST00000636425 70 ntBASIC-0.56□□□□□ -2.5
LHX1P48742 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.57□□□□□ -2.5
LHX1P48742 SNORA62.4-201ENST00000365504 151 ntBASIC-0.57□□□□□ -2.5
LHX1P48742 MIR203A-201ENST00000384836 110 ntBASIC-0.57□□□□□ -2.5
LHX1P48742 MIR124-2-201ENST00000385081 109 ntBASIC-0.57□□□□□ -2.5
LHX1P48742 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.57□□□□□ -2.5
LHX1P48742 MIR1236-201ENST00000408340 102 ntBASIC-0.57□□□□□ -2.5
LHX1P48742 RNU6-589P-201ENST00000516485 107 ntBASIC-0.57□□□□□ -2.5
LHX1P48742 RNA5SP147-201ENST00000516493 109 ntBASIC-0.57□□□□□ -2.5
LHX1P48742 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.57□□□□□ -2.5
LHX1P48742 MIR382-201ENST00000637119 76 ntBASIC-0.57□□□□□ -2.5
LHX1P48742 MIR4773-1-201ENST00000637203 78 ntBASIC-0.57□□□□□ -2.5
LHX1P48742 SNORA2.1-201ENST00000363089 137 ntBASIC-0.58□□□□□ -2.5
LHX1P48742 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.58□□□□□ -2.5
LHX1P48742 MIR6509-201ENST00000614603 85 ntBASIC-0.58□□□□□ -2.5
LHX1P48742 SNORD114-17-201ENST00000364699 75 ntBASIC-0.59□□□□□ -2.5
LHX1P48742 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.59□□□□□ -2.5
LHX1P48742 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.59□□□□□ -2.5
LHX1P48742 RNY1P7-201ENST00000384743 110 ntBASIC-0.59□□□□□ -2.5
LHX1P48742 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.59□□□□□ -2.5
LHX1P48742 MIR1255B2-201ENST00000408618 67 ntBASIC-0.59□□□□□ -2.5
LHX1P48742 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.59□□□□□ -2.5
LHX1P48742 SCARNA18B-201ENST00000458806 135 ntBASIC-0.59□□□□□ -2.5
LHX1P48742 SNORD18.2-201ENST00000459604 70 ntBASIC-0.59□□□□□ -2.5
LHX1P48742 RNU7-153P-201ENST00000516455 62 ntBASIC-0.59□□□□□ -2.5
LHX1P48742 CYP3A54P-201ENST00000566950 75 ntBASIC-0.59□□□□□ -2.5
LHX1P48742 MIR3681-201ENST00000580089 72 ntBASIC-0.59□□□□□ -2.5
LHX1P48742 MIR4499-201ENST00000584834 69 ntBASIC-0.59□□□□□ -2.5
LHX1P48742 AC132825.6-201ENST00000638861 357 ntBASIC-0.59□□□□□ -2.5
LHX1P48742 RNU6-766P-201ENST00000362478 107 ntBASIC-0.6□□□□□ -2.51
LHX1P48742 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.6□□□□□ -2.51
LHX1P48742 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.6□□□□□ -2.51
LHX1P48742 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.6□□□□□ -2.51
LHX1P48742 RNU6-274P-201ENST00000459566 107 ntBASIC-0.6□□□□□ -2.51
LHX1P48742 RNU6-313P-201ENST00000516317 112 ntBASIC-0.6□□□□□ -2.51
LHX1P48742 RNU6-479P-201ENST00000516348 105 ntBASIC-0.6□□□□□ -2.51
LHX1P48742 MIR548AG1-201ENST00000579932 66 ntBASIC-0.6□□□□□ -2.51
LHX1P48742 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.6□□□□□ -2.51
LHX1P48742 SNORD115-27-201ENST00000364430 82 ntBASIC-0.61□□□□□ -2.51
LHX1P48742 MIR521-2-201ENST00000384818 87 ntBASIC-0.61□□□□□ -2.51
LHX1P48742 RNA5SP451-201ENST00000410588 110 ntBASIC-0.61□□□□□ -2.51
LHX1P48742 AL691482.2-201ENST00000457453 84 ntBASIC-0.61□□□□□ -2.51
LHX1P48742 MIR5589-201ENST00000579442 60 ntBASIC-0.61□□□□□ -2.51
LHX1P48742 AP001180.6-201ENST00000584918 159 ntBASIC-0.61□□□□□ -2.51
LHX1P48742 MIR6739-201ENST00000622461 75 ntBASIC-0.61□□□□□ -2.51
LHX1P48742 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.62□□□□□ -2.51
LHX1P48742 MIR519A2-201ENST00000384990 87 ntBASIC-0.62□□□□□ -2.51
LHX1P48742 SCARNA17-201ENST00000516183 144 ntBASIC-0.62□□□□□ -2.51
LHX1P48742 RNA5SP470-201ENST00000516463 106 ntBASIC-0.62□□□□□ -2.51
LHX1P48742 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.62□□□□□ -2.51
LHX1P48742 MIR3910-1-201ENST00000580936 111 ntBASIC-0.62□□□□□ -2.51
LHX1P48742 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.62□□□□□ -2.51
LHX1P48742 SNORD115-22-201ENST00000364456 82 ntBASIC-0.63□□□□□ -2.51
LHX1P48742 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.63□□□□□ -2.51
LHX1P48742 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.63□□□□□ -2.51
LHX1P48742 SNORD83B-201ENST00000386745 93 ntBASIC-0.63□□□□□ -2.51
LHX1P48742 MTATP8P2-201ENST00000435212 202 ntBASIC-0.63□□□□□ -2.51
LHX1P48742 RNU6-158P-201ENST00000517104 100 ntBASIC-0.63□□□□□ -2.51
LHX1P48742 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
LHX1P48742 MIR101-1-201ENST00000362265 75 ntBASIC-0.64□□□□□ -2.51
LHX1P48742 RNU6-340P-201ENST00000364005 107 ntBASIC-0.64□□□□□ -2.51
LHX1P48742 SNORD63.1-201ENST00000516178 80 ntBASIC-0.64□□□□□ -2.51
LHX1P48742 uc_338.19-201ENST00000616808 99 ntBASIC-0.64□□□□□ -2.51
LHX1P48742 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms