Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 MIR20A-201ENST00000362279 71 ntBASIC0.2□□□□□ -2.38
RFX2P48378 RNA5SP325-201ENST00000363756 130 ntBASIC0.2□□□□□ -2.38
RFX2P48378 snoU13.13-201ENST00000458842 104 ntBASIC0.2□□□□□ -2.38
RFX2P48378 SNORA40.17-201ENST00000517256 115 ntBASIC0.2□□□□□ -2.38
RFX2P48378 RN7SL660P-201ENST00000614852 299 ntBASIC0.2□□□□□ -2.38
RFX2P48378 Y_RNA.788-201ENST00000622394 112 ntBASIC0.2□□□□□ -2.38
RFX2P48378 RNU6-1275P-201ENST00000391087 107 ntBASIC0.19□□□□□ -2.38
RFX2P48378 SNORA75.1-201ENST00000391130 148 ntBASIC0.19□□□□□ -2.38
RFX2P48378 MIR876-201ENST00000401147 81 ntBASIC0.19□□□□□ -2.38
RFX2P48378 AC244090.1-201ENST00000441884 93 ntBASIC0.19□□□□□ -2.38
RFX2P48378 RNU6-175P-201ENST00000516896 107 ntBASIC0.19□□□□□ -2.38
RFX2P48378 MIR3675-201ENST00000583661 73 ntBASIC0.19□□□□□ -2.38
RFX2P48378 MIR664A-201ENST00000626086 82 ntBASIC0.19□□□□□ -2.38
RFX2P48378 Y_RNA.685-201ENST00000516532 108 ntBASIC0.18□□□□□ -2.38
RFX2P48378 RNA5SP395-201ENST00000516567 118 ntBASIC0.18□□□□□ -2.38
RFX2P48378 AC104408.1-201ENST00000605241 170 ntBASIC0.18□□□□□ -2.38
RFX2P48378 RNU6-24P-201ENST00000384440 107 ntBASIC0.17□□□□□ -2.38
RFX2P48378 MIR593-201ENST00000384856 100 ntBASIC0.17□□□□□ -2.38
RFX2P48378 AC021146.9-201ENST00000512503 156 ntBASIC0.17□□□□□ -2.38
RFX2P48378 MIR6515-201ENST00000619843 57 ntBASIC0.17□□□□□ -2.38
RFX2P48378 SNORA2.1-201ENST00000363089 137 ntBASIC0.16□□□□□ -2.38
RFX2P48378 SNORA63.6-201ENST00000364921 119 ntBASIC0.16□□□□□ -2.38
RFX2P48378 RNU6-1036P-201ENST00000383959 104 ntBASIC0.16□□□□□ -2.38
RFX2P48378 AC022709.1-201ENST00000615967 87 ntBASIC0.16□□□□□ -2.38
RFX2P48378 RNA5SP214-201ENST00000363378 118 ntBASIC0.15□□□□□ -2.39
RFX2P48378 MIR610-201ENST00000385139 96 ntBASIC0.15□□□□□ -2.39
RFX2P48378 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
RFX2P48378 RNA5SP163-201ENST00000410304 99 ntBASIC0.15□□□□□ -2.39
RFX2P48378 RNU6-70P-201ENST00000516438 60 ntBASIC0.15□□□□□ -2.39
RFX2P48378 MIR3134-201ENST00000579433 74 ntBASIC0.15□□□□□ -2.39
RFX2P48378 MIR6514-201ENST00000622549 70 ntBASIC0.15□□□□□ -2.39
RFX2P48378 SNORD45.1-201ENST00000363181 77 ntBASIC0.14□□□□□ -2.39
RFX2P48378 SNORD114-23-201ENST00000363536 72 ntBASIC0.14□□□□□ -2.39
RFX2P48378 MIR106A-201ENST00000384870 81 ntBASIC0.14□□□□□ -2.39
RFX2P48378 MIR7-2-201ENST00000384970 110 ntBASIC0.14□□□□□ -2.39
RFX2P48378 MIR889-201ENST00000401280 79 ntBASIC0.14□□□□□ -2.39
RFX2P48378 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
RFX2P48378 RNA5SP193-201ENST00000410353 107 ntBASIC0.14□□□□□ -2.39
RFX2P48378 snoU13.18-201ENST00000459483 104 ntBASIC0.14□□□□□ -2.39
RFX2P48378 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
RFX2P48378 U7.4-201ENST00000614961 63 ntBASIC0.14□□□□□ -2.39
RFX2P48378 SNORD114-5-201ENST00000362928 70 ntBASIC0.13□□□□□ -2.39
RFX2P48378 SNORA42.1-201ENST00000363515 137 ntBASIC0.13□□□□□ -2.39
RFX2P48378 SNORD114-9-201ENST00000364370 72 ntBASIC0.13□□□□□ -2.39
RFX2P48378 Y_RNA.244-201ENST00000364484 109 ntBASIC0.13□□□□□ -2.39
RFX2P48378 MIR598-201ENST00000384868 97 ntBASIC0.13□□□□□ -2.39
RFX2P48378 SNORA49-201ENST00000386157 136 ntBASIC0.13□□□□□ -2.39
RFX2P48378 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
RFX2P48378 RNU6-604P-201ENST00000390917 100 ntBASIC0.13□□□□□ -2.39
RFX2P48378 AC145423.2-201ENST00000610631 239 ntBASIC0.13□□□□□ -2.39
RFX2P48378 MIR145-201ENST00000384967 88 ntBASIC0.12□□□□□ -2.39
RFX2P48378 Y_RNA.681-201ENST00000516445 113 ntBASIC0.12□□□□□ -2.39
RFX2P48378 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.12□□□□□ -2.39
RFX2P48378 MIR892B-201ENST00000401279 77 ntBASIC0.11□□□□□ -2.39
RFX2P48378 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
RFX2P48378 RNA5SP436-201ENST00000516020 115 ntBASIC0.1□□□□□ -2.39
RFX2P48378 MIR924-201ENST00000638017 53 ntBASIC0.1□□□□□ -2.39
RFX2P48378 RNU6-1241P-201ENST00000384536 107 ntBASIC0.09□□□□□ -2.4
RFX2P48378 Y_RNA.633-201ENST00000459107 95 ntBASIC0.09□□□□□ -2.4
RFX2P48378 RNU6-180P-201ENST00000516697 61 ntBASIC0.09□□□□□ -2.4
RFX2P48378 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.09□□□□□ -2.4
RFX2P48378 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.09□□□□□ -2.4
RFX2P48378 AC010487.4-201ENST00000637027 61 ntBASIC0.09□□□□□ -2.4
RFX2P48378 Y_RNA.250-201ENST00000364542 110 ntBASIC0.08□□□□□ -2.4
RFX2P48378 SNORD2-201ENST00000459163 69 ntBASIC0.08□□□□□ -2.4
RFX2P48378 AP000676.1-201ENST00000533307 52 ntBASIC0.08□□□□□ -2.4
RFX2P48378 CR383656.4-201ENST00000546909 122 ntBASIC0.08□□□□□ -2.4
RFX2P48378 MIR6739-201ENST00000622461 75 ntBASIC0.08□□□□□ -2.4
RFX2P48378 U6.96-201ENST00000636425 70 ntBASIC0.08□□□□□ -2.4
RFX2P48378 SNORD115-25-201ENST00000362619 82 ntBASIC0.07□□□□□ -2.4
RFX2P48378 RNA5SP98-201ENST00000363158 137 ntBASIC0.07□□□□□ -2.4
RFX2P48378 SNORD115-22-201ENST00000364456 82 ntBASIC0.07□□□□□ -2.4
RFX2P48378 SNORA33.1-201ENST00000364957 130 ntBASIC0.07□□□□□ -2.4
RFX2P48378 SNORD45A-201ENST00000384512 84 ntBASIC0.07□□□□□ -2.4
RFX2P48378 MIR154-201ENST00000385243 84 ntBASIC0.07□□□□□ -2.4
RFX2P48378 RNU7-159P-201ENST00000459284 62 ntBASIC0.07□□□□□ -2.4
RFX2P48378 RNU6-982P-201ENST00000516216 102 ntBASIC0.07□□□□□ -2.4
RFX2P48378 SNORA15B-2-201ENST00000384058 135 ntBASIC0.06□□□□□ -2.4
RFX2P48378 SNORA15B-1-201ENST00000384334 135 ntBASIC0.06□□□□□ -2.4
RFX2P48378 RNU6-1162P-201ENST00000384443 104 ntBASIC0.06□□□□□ -2.4
RFX2P48378 RNU6-411P-201ENST00000384451 107 ntBASIC0.06□□□□□ -2.4
RFX2P48378 MIR521-2-201ENST00000384818 87 ntBASIC0.06□□□□□ -2.4
RFX2P48378 RNU6-587P-201ENST00000391282 106 ntBASIC0.06□□□□□ -2.4
RFX2P48378 RNU6-638P-201ENST00000516582 104 ntBASIC0.06□□□□□ -2.4
RFX2P48378 SNORA62.5-201ENST00000516634 120 ntBASIC0.06□□□□□ -2.4
RFX2P48378 MIR4743-201ENST00000584576 69 ntBASIC0.06□□□□□ -2.4
RFX2P48378 RNU6-645P-201ENST00000364649 106 ntBASIC0.05□□□□□ -2.4
RFX2P48378 RNU6-929P-201ENST00000384429 107 ntBASIC0.05□□□□□ -2.4
RFX2P48378 RNU7-165P-201ENST00000458864 60 ntBASIC0.05□□□□□ -2.4
RFX2P48378 RNU6-687P-201ENST00000516443 89 ntBASIC0.05□□□□□ -2.4
RFX2P48378 RNU6-1015P-201ENST00000517121 99 ntBASIC0.05□□□□□ -2.4
RFX2P48378 MIR8053-201ENST00000613344 75 ntBASIC0.05□□□□□ -2.4
RFX2P48378 RNU6-776P-201ENST00000364403 104 ntBASIC0.04□□□□□ -2.4
RFX2P48378 RNU6-1022P-201ENST00000365049 104 ntBASIC0.04□□□□□ -2.4
RFX2P48378 Y_RNA.355-201ENST00000365462 98 ntBASIC0.04□□□□□ -2.4
RFX2P48378 Y_RNA.545-201ENST00000384652 105 ntBASIC0.04□□□□□ -2.4
RFX2P48378 RNU6-656P-201ENST00000516785 107 ntBASIC0.04□□□□□ -2.4
RFX2P48378 AC090617.8-201ENST00000623339 167 ntBASIC0.04□□□□□ -2.4
RFX2P48378 MIR4662A-201ENST00000637499 67 ntBASIC0.04□□□□□ -2.4
RFX2P48378 MIR148A-201ENST00000362215 68 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 207.1 ms