Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.14□□□□□ -2.43
SOX3P41225 snoU13.13-201ENST00000458842 104 ntBASIC-0.14□□□□□ -2.43
SOX3P41225 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.14□□□□□ -2.43
SOX3P41225 MIR4773-1-201ENST00000637203 78 ntBASIC-0.14□□□□□ -2.43
SOX3P41225 RNU5F-1-201ENST00000362507 117 ntBASIC-0.15□□□□□ -2.43
SOX3P41225 RNA5SP98-201ENST00000363158 137 ntBASIC-0.15□□□□□ -2.43
SOX3P41225 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.15□□□□□ -2.43
SOX3P41225 MIR203A-201ENST00000384836 110 ntBASIC-0.15□□□□□ -2.43
SOX3P41225 MIR214-201ENST00000385214 110 ntBASIC-0.15□□□□□ -2.43
SOX3P41225 AL450471.1-201ENST00000447509 127 ntBASIC-0.15□□□□□ -2.43
SOX3P41225 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.15□□□□□ -2.43
SOX3P41225 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.16□□□□□ -2.44
SOX3P41225 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.16□□□□□ -2.44
SOX3P41225 RNU6-35P-201ENST00000384530 107 ntBASIC-0.16□□□□□ -2.44
SOX3P41225 MIR9-2-201ENST00000384838 87 ntBASIC-0.16□□□□□ -2.44
SOX3P41225 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.16□□□□□ -2.44
SOX3P41225 AC093729.1-201ENST00000513074 128 ntBASIC-0.16□□□□□ -2.44
SOX3P41225 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.16□□□□□ -2.44
SOX3P41225 AC006160.2-201ENST00000637708 154 ntBASIC-0.16□□□□□ -2.44
SOX3P41225 RNU6-208P-201ENST00000362431 107 ntBASIC-0.17□□□□□ -2.44
SOX3P41225 RNU6-478P-201ENST00000363904 110 ntBASIC-0.17□□□□□ -2.44
SOX3P41225 SNORD114-4-201ENST00000363962 75 ntBASIC-0.17□□□□□ -2.44
SOX3P41225 RNU6-46P-201ENST00000383860 107 ntBASIC-0.17□□□□□ -2.44
SOX3P41225 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.17□□□□□ -2.44
SOX3P41225 RNU6-337P-201ENST00000391243 106 ntBASIC-0.17□□□□□ -2.44
SOX3P41225 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.17□□□□□ -2.44
SOX3P41225 AP000676.1-201ENST00000533307 52 ntBASIC-0.17□□□□□ -2.44
SOX3P41225 MIR5582-201ENST00000579697 68 ntBASIC-0.17□□□□□ -2.44
SOX3P41225 MIR4802-201ENST00000581881 80 ntBASIC-0.17□□□□□ -2.44
SOX3P41225 AC090617.8-201ENST00000623339 167 ntBASIC-0.17□□□□□ -2.44
SOX3P41225 RNU6-502P-201ENST00000362419 108 ntBASIC-0.18□□□□□ -2.44
SOX3P41225 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.18□□□□□ -2.44
SOX3P41225 SNORD49B-201ENST00000365172 72 ntBASIC-0.18□□□□□ -2.44
SOX3P41225 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.18□□□□□ -2.44
SOX3P41225 SNORD115-25-201ENST00000362619 82 ntBASIC-0.19□□□□□ -2.44
SOX3P41225 RNU6-340P-201ENST00000364005 107 ntBASIC-0.19□□□□□ -2.44
SOX3P41225 SNORD114-12-201ENST00000365400 75 ntBASIC-0.19□□□□□ -2.44
SOX3P41225 RNU6-260P-201ENST00000384092 107 ntBASIC-0.19□□□□□ -2.44
SOX3P41225 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.19□□□□□ -2.44
SOX3P41225 RNU6-455P-201ENST00000384681 107 ntBASIC-0.19□□□□□ -2.44
SOX3P41225 SNORD77.2-201ENST00000391045 68 ntBASIC-0.19□□□□□ -2.44
SOX3P41225 RNA5SP147-201ENST00000516493 109 ntBASIC-0.19□□□□□ -2.44
SOX3P41225 MIR5589-201ENST00000579442 60 ntBASIC-0.19□□□□□ -2.44
SOX3P41225 MIR3657-201ENST00000584818 117 ntBASIC-0.19□□□□□ -2.44
SOX3P41225 AC006254.2-201ENST00000603259 279 ntBASIC-0.19□□□□□ -2.44
SOX3P41225 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
SOX3P41225 MIR6509-201ENST00000614603 85 ntBASIC-0.19□□□□□ -2.44
SOX3P41225 SNORA18.1-201ENST00000363418 128 ntBASIC-0.2□□□□□ -2.44
SOX3P41225 SNORA63.6-201ENST00000364921 119 ntBASIC-0.2□□□□□ -2.44
SOX3P41225 RNU6-592P-201ENST00000411333 103 ntBASIC-0.2□□□□□ -2.44
SOX3P41225 AL590491.3-201ENST00000610731 82 ntBASIC-0.2□□□□□ -2.44
SOX3P41225 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.21□□□□□ -2.44
SOX3P41225 MIR4636-201ENST00000582271 80 ntBASIC-0.21□□□□□ -2.44
SOX3P41225 MIR4645-201ENST00000583158 77 ntBASIC-0.21□□□□□ -2.44
SOX3P41225 MIR6773-201ENST00000612812 74 ntBASIC-0.21□□□□□ -2.44
SOX3P41225 MIR8064-201ENST00000612863 90 ntBASIC-0.21□□□□□ -2.44
SOX3P41225 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.21□□□□□ -2.44
SOX3P41225 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.22□□□□□ -2.44
SOX3P41225 RNU6-330P-201ENST00000363015 107 ntBASIC-0.22□□□□□ -2.44
SOX3P41225 SNORD115-37-201ENST00000363768 82 ntBASIC-0.22□□□□□ -2.44
SOX3P41225 RNA5SP368-201ENST00000364298 116 ntBASIC-0.22□□□□□ -2.44
SOX3P41225 RNU6-979P-201ENST00000383896 107 ntBASIC-0.22□□□□□ -2.44
SOX3P41225 SNORD56B-201ENST00000384713 71 ntBASIC-0.22□□□□□ -2.44
SOX3P41225 MIR1265-201ENST00000408444 86 ntBASIC-0.22□□□□□ -2.44
SOX3P41225 AL691482.2-201ENST00000457453 84 ntBASIC-0.22□□□□□ -2.44
SOX3P41225 SNORD4A-201ENST00000459174 72 ntBASIC-0.22□□□□□ -2.44
SOX3P41225 AC021146.9-201ENST00000512503 156 ntBASIC-0.22□□□□□ -2.44
SOX3P41225 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.22□□□□□ -2.44
SOX3P41225 MIR5588-201ENST00000581890 63 ntBASIC-0.22□□□□□ -2.44
SOX3P41225 AP001180.6-201ENST00000584918 159 ntBASIC-0.22□□□□□ -2.44
SOX3P41225 SNORD114-28-201ENST00000363610 72 ntBASIC-0.23□□□□□ -2.45
SOX3P41225 RNU6-294P-201ENST00000364999 102 ntBASIC-0.23□□□□□ -2.45
SOX3P41225 RNU7-55P-201ENST00000459426 62 ntBASIC-0.23□□□□□ -2.45
SOX3P41225 RNU6-274P-201ENST00000459566 107 ntBASIC-0.23□□□□□ -2.45
SOX3P41225 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.23□□□□□ -2.45
SOX3P41225 YWHAEP3-201ENST00000582767 121 ntBASIC-0.23□□□□□ -2.45
SOX3P41225 MIR494-201ENST00000349529 81 ntBASIC-0.24□□□□□ -2.45
SOX3P41225 RNY1P1-201ENST00000364372 112 ntBASIC-0.24□□□□□ -2.45
SOX3P41225 Z95118.1-201ENST00000421372 247 ntBASIC-0.24□□□□□ -2.45
SOX3P41225 RNU6-557P-201ENST00000516842 110 ntBASIC-0.24□□□□□ -2.45
SOX3P41225 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.25□□□□□ -2.45
SOX3P41225 SNORA2.1-201ENST00000363089 137 ntBASIC-0.25□□□□□ -2.45
SOX3P41225 SNORD114-11-201ENST00000363738 75 ntBASIC-0.25□□□□□ -2.45
SOX3P41225 SNORA33.1-201ENST00000364957 130 ntBASIC-0.25□□□□□ -2.45
SOX3P41225 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.25□□□□□ -2.45
SOX3P41225 RNU6-900P-201ENST00000384498 102 ntBASIC-0.25□□□□□ -2.45
SOX3P41225 MIRLET7B-201ENST00000385140 83 ntBASIC-0.25□□□□□ -2.45
SOX3P41225 AC096531.1-201ENST00000419107 107 ntBASIC-0.25□□□□□ -2.45
SOX3P41225 MIR3666-201ENST00000607845 111 ntBASIC-0.25□□□□□ -2.45
SOX3P41225 uc_338.36-201ENST00000622331 158 ntBASIC-0.25□□□□□ -2.45
SOX3P41225 RNA5SP275-201ENST00000363936 118 ntBASIC-0.26□□□□□ -2.45
SOX3P41225 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.26□□□□□ -2.45
SOX3P41225 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.26□□□□□ -2.45
SOX3P41225 RNA5SP300-201ENST00000391197 107 ntBASIC-0.26□□□□□ -2.45
SOX3P41225 AC022137.1-201ENST00000483735 151 ntBASIC-0.26□□□□□ -2.45
SOX3P41225 RNU6-320P-201ENST00000516511 106 ntBASIC-0.26□□□□□ -2.45
SOX3P41225 MIR4280-201ENST00000582178 76 ntBASIC-0.26□□□□□ -2.45
SOX3P41225 IGLL4P-201ENST00000614590 133 ntBASIC-0.26□□□□□ -2.45
SOX3P41225 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
SOX3P41225 RNU6-129P-201ENST00000391022 107 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 244.5 ms