Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 MIR4295-201ENST00000585286 85 ntBASIC1.52□□□□□ -2.17
ATP6V1AP38606 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
ATP6V1AP38606 MIR582-201ENST00000365731 98 ntBASIC1.51□□□□□ -2.17
ATP6V1AP38606 RNU6-808P-201ENST00000391233 108 ntBASIC1.51□□□□□ -2.17
ATP6V1AP38606 AC087343.1-201ENST00000477341 475 ntBASIC1.51□□□□□ -2.17
ATP6V1AP38606 RNA5SP404-201ENST00000517118 132 ntBASIC1.51□□□□□ -2.17
ATP6V1AP38606 U4.4-201ENST00000620626 117 ntBASIC1.51□□□□□ -2.17
ATP6V1AP38606 SNORA25.8-201ENST00000364831 128 ntBASIC1.5□□□□□ -2.17
ATP6V1AP38606 RNU4-45P-201ENST00000365469 141 ntBASIC1.5□□□□□ -2.17
ATP6V1AP38606 MIR618-201ENST00000385287 98 ntBASIC1.5□□□□□ -2.17
ATP6V1AP38606 MIR548E-201ENST00000408287 88 ntBASIC1.5□□□□□ -2.17
ATP6V1AP38606 RNA5SP94-201ENST00000516917 108 ntBASIC1.5□□□□□ -2.17
ATP6V1AP38606 SNORD114-26-201ENST00000363543 72 ntBASIC1.49□□□□□ -2.17
ATP6V1AP38606 RNU1-124P-201ENST00000363861 145 ntBASIC1.49□□□□□ -2.17
ATP6V1AP38606 RNU6-936P-201ENST00000384005 107 ntBASIC1.49□□□□□ -2.17
ATP6V1AP38606 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.49□□□□□ -2.17
ATP6V1AP38606 MIR7107-201ENST00000611489 80 ntBASIC1.49□□□□□ -2.17
ATP6V1AP38606 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
ATP6V1AP38606 MIR26B-201ENST00000362251 77 ntBASIC1.47□□□□□ -2.17
ATP6V1AP38606 Y_RNA.246-201ENST00000364495 108 ntBASIC1.45□□□□□ -2.18
ATP6V1AP38606 MIR598-201ENST00000384868 97 ntBASIC1.45□□□□□ -2.18
ATP6V1AP38606 RNA5SP222-201ENST00000411039 105 ntBASIC1.45□□□□□ -2.18
ATP6V1AP38606 CYP3A54P-201ENST00000566950 75 ntBASIC1.45□□□□□ -2.18
ATP6V1AP38606 SNORA70.25-201ENST00000612741 95 ntBASIC1.45□□□□□ -2.18
ATP6V1AP38606 MIR6779-201ENST00000617283 64 ntBASIC1.45□□□□□ -2.18
ATP6V1AP38606 U6.96-201ENST00000636425 70 ntBASIC1.45□□□□□ -2.18
ATP6V1AP38606 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.44□□□□□ -2.18
ATP6V1AP38606 RNA5SP436-201ENST00000516020 115 ntBASIC1.43□□□□□ -2.18
ATP6V1AP38606 MIR4752-201ENST00000579672 72 ntBASIC1.43□□□□□ -2.18
ATP6V1AP38606 RNU6-1312P-201ENST00000362425 108 ntBASIC1.42□□□□□ -2.18
ATP6V1AP38606 Y_RNA.325-201ENST00000365171 122 ntBASIC1.42□□□□□ -2.18
ATP6V1AP38606 RNU6-1184P-201ENST00000384588 108 ntBASIC1.42□□□□□ -2.18
ATP6V1AP38606 RNU6-520P-201ENST00000384717 104 ntBASIC1.41□□□□□ -2.18
ATP6V1AP38606 MIR516B1-201ENST00000385211 90 ntBASIC1.41□□□□□ -2.18
ATP6V1AP38606 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
ATP6V1AP38606 RNA5SP325-201ENST00000363756 130 ntBASIC1.4□□□□□ -2.19
ATP6V1AP38606 RNU6-939P-201ENST00000384634 107 ntBASIC1.4□□□□□ -2.19
ATP6V1AP38606 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
ATP6V1AP38606 MIR373-201ENST00000362273 69 ntBASIC1.39□□□□□ -2.19
ATP6V1AP38606 SNORA9.1-201ENST00000362412 131 ntBASIC1.39□□□□□ -2.19
ATP6V1AP38606 SNORA41B-201ENST00000384785 128 ntBASIC1.39□□□□□ -2.19
ATP6V1AP38606 HMGN2P22-201ENST00000427588 175 ntBASIC1.39□□□□□ -2.19
ATP6V1AP38606 AC243829.6-201ENST00000612652 106 ntBASIC1.39□□□□□ -2.19
ATP6V1AP38606 MIR20A-201ENST00000362279 71 ntBASIC1.37□□□□□ -2.19
ATP6V1AP38606 AL021921.1-201ENST00000442774 93 ntBASIC1.37□□□□□ -2.19
ATP6V1AP38606 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.37□□□□□ -2.19
ATP6V1AP38606 RNU6-1246P-201ENST00000391064 107 ntBASIC1.36□□□□□ -2.19
ATP6V1AP38606 AC244090.1-201ENST00000441884 93 ntBASIC1.36□□□□□ -2.19
ATP6V1AP38606 MIR5706-201ENST00000579841 80 ntBASIC1.36□□□□□ -2.19
ATP6V1AP38606 AL353765.1-201ENST00000605514 183 ntBASIC1.36□□□□□ -2.19
ATP6V1AP38606 SNORD114-21-201ENST00000606412 72 ntBASIC1.36□□□□□ -2.19
ATP6V1AP38606 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.35□□□□□ -2.19
ATP6V1AP38606 RNU6-518P-201ENST00000516056 96 ntBASIC1.35□□□□□ -2.19
ATP6V1AP38606 AC090617.8-201ENST00000623339 167 ntBASIC1.35□□□□□ -2.19
ATP6V1AP38606 SNORA36.2-201ENST00000384004 127 ntBASIC1.34□□□□□ -2.19
ATP6V1AP38606 RNU7-119P-201ENST00000459279 63 ntBASIC1.34□□□□□ -2.19
ATP6V1AP38606 MIR5000-201ENST00000577717 103 ntBASIC1.34□□□□□ -2.19
ATP6V1AP38606 AC211469.2-201ENST00000605461 205 ntBASIC1.34□□□□□ -2.19
ATP6V1AP38606 RNA5SP517-201ENST00000364724 117 ntBASIC1.33□□□□□ -2.2
ATP6V1AP38606 AC069271.1-201ENST00000445577 156 ntBASIC1.33□□□□□ -2.2
ATP6V1AP38606 MIR548AD-201ENST00000584780 82 ntBASIC1.33□□□□□ -2.2
ATP6V1AP38606 RNU1-29P-201ENST00000606574 126 ntBASIC1.33□□□□□ -2.2
ATP6V1AP38606 MIR1255B2-201ENST00000408618 67 ntBASIC1.32□□□□□ -2.2
ATP6V1AP38606 MIR3973-201ENST00000579824 107 ntBASIC1.32□□□□□ -2.2
ATP6V1AP38606 Y_RNA.74-201ENST00000362911 99 ntBASIC1.31□□□□□ -2.2
ATP6V1AP38606 RNY1P8-201ENST00000383970 114 ntBASIC1.31□□□□□ -2.2
ATP6V1AP38606 AC243829.3-201ENST00000622177 108 ntBASIC1.3□□□□□ -2.2
ATP6V1AP38606 RNU4-38P-201ENST00000364472 129 ntBASIC1.29□□□□□ -2.2
ATP6V1AP38606 MIR519A2-201ENST00000384990 87 ntBASIC1.29□□□□□ -2.2
ATP6V1AP38606 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.29□□□□□ -2.2
ATP6V1AP38606 MIR1285-1-201ENST00000408593 84 ntBASIC1.29□□□□□ -2.2
ATP6V1AP38606 RNU6-231P-201ENST00000517122 103 ntBASIC1.29□□□□□ -2.2
ATP6V1AP38606 MIR527-201ENST00000385244 85 ntBASIC1.28□□□□□ -2.2
ATP6V1AP38606 SNORD2-201ENST00000459163 69 ntBASIC1.28□□□□□ -2.2
ATP6V1AP38606 CYP3A137P-201ENST00000562436 69 ntBASIC1.28□□□□□ -2.2
ATP6V1AP38606 SNORA25.18-201ENST00000607153 114 ntBASIC1.28□□□□□ -2.2
ATP6V1AP38606 SNORD114-29-201ENST00000364819 70 ntBASIC1.27□□□□□ -2.21
ATP6V1AP38606 MIR140-201ENST00000385282 100 ntBASIC1.27□□□□□ -2.21
ATP6V1AP38606 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.27□□□□□ -2.21
ATP6V1AP38606 SNORD116-16-201ENST00000384533 92 ntBASIC1.26□□□□□ -2.21
ATP6V1AP38606 MIR532-201ENST00000385025 91 ntBASIC1.26□□□□□ -2.21
ATP6V1AP38606 U7.6-201ENST00000610841 64 ntBASIC1.26□□□□□ -2.21
ATP6V1AP38606 MIR6857-201ENST00000613267 93 ntBASIC1.26□□□□□ -2.21
ATP6V1AP38606 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.26□□□□□ -2.21
ATP6V1AP38606 SNORA2A-201ENST00000383885 135 ntBASIC1.25□□□□□ -2.21
ATP6V1AP38606 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
ATP6V1AP38606 ACA64.5-201ENST00000516207 127 ntBASIC1.25□□□□□ -2.21
ATP6V1AP38606 RNU6-229P-201ENST00000516614 102 ntBASIC1.25□□□□□ -2.21
ATP6V1AP38606 MIR4661-201ENST00000582720 75 ntBASIC1.25□□□□□ -2.21
ATP6V1AP38606 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.25□□□□□ -2.21
ATP6V1AP38606 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
ATP6V1AP38606 Y_RNA.282-201ENST00000364793 102 ntBASIC1.24□□□□□ -2.21
ATP6V1AP38606 Y_RNA.379-201ENST00000365653 102 ntBASIC1.24□□□□□ -2.21
ATP6V1AP38606 SNORD116.2-201ENST00000391251 93 ntBASIC1.24□□□□□ -2.21
ATP6V1AP38606 RNU6-337P-201ENST00000391243 106 ntBASIC1.23□□□□□ -2.21
ATP6V1AP38606 OR2A41P-201ENST00000473586 105 ntBASIC1.23□□□□□ -2.21
ATP6V1AP38606 RNU7-188P-201ENST00000517063 64 ntBASIC1.23□□□□□ -2.21
ATP6V1AP38606 SNORD118-201ENST00000363593 134 ntBASIC1.22□□□□□ -2.21
ATP6V1AP38606 Y_RNA.423-201ENST00000384057 113 ntBASIC1.22□□□□□ -2.21
ATP6V1AP38606 SNORA40.8-201ENST00000411034 126 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms