Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 MIR4295-201ENST00000585286 85 ntBASIC1.52□□□□□ -2.17
ATP6V1AP38606 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
ATP6V1AP38606 MIR582-201ENST00000365731 98 ntBASIC1.51□□□□□ -2.17
ATP6V1AP38606 RNU6-808P-201ENST00000391233 108 ntBASIC1.51□□□□□ -2.17
ATP6V1AP38606 AC087343.1-201ENST00000477341 475 ntBASIC1.51□□□□□ -2.17
ATP6V1AP38606 RNA5SP404-201ENST00000517118 132 ntBASIC1.51□□□□□ -2.17
ATP6V1AP38606 U4.4-201ENST00000620626 117 ntBASIC1.51□□□□□ -2.17
ATP6V1AP38606 SNORA25.8-201ENST00000364831 128 ntBASIC1.5□□□□□ -2.17
ATP6V1AP38606 RNU4-45P-201ENST00000365469 141 ntBASIC1.5□□□□□ -2.17
ATP6V1AP38606 MIR618-201ENST00000385287 98 ntBASIC1.5□□□□□ -2.17
ATP6V1AP38606 MIR548E-201ENST00000408287 88 ntBASIC1.5□□□□□ -2.17
ATP6V1AP38606 RNA5SP94-201ENST00000516917 108 ntBASIC1.5□□□□□ -2.17
ATP6V1AP38606 SNORD114-26-201ENST00000363543 72 ntBASIC1.49□□□□□ -2.17
ATP6V1AP38606 RNU1-124P-201ENST00000363861 145 ntBASIC1.49□□□□□ -2.17
ATP6V1AP38606 RNU6-936P-201ENST00000384005 107 ntBASIC1.49□□□□□ -2.17
ATP6V1AP38606 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.49□□□□□ -2.17
ATP6V1AP38606 MIR7107-201ENST00000611489 80 ntBASIC1.49□□□□□ -2.17
ATP6V1AP38606 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
ATP6V1AP38606 MIR26B-201ENST00000362251 77 ntBASIC1.47□□□□□ -2.17
ATP6V1AP38606 Y_RNA.246-201ENST00000364495 108 ntBASIC1.45□□□□□ -2.18
ATP6V1AP38606 MIR598-201ENST00000384868 97 ntBASIC1.45□□□□□ -2.18
ATP6V1AP38606 RNA5SP222-201ENST00000411039 105 ntBASIC1.45□□□□□ -2.18
ATP6V1AP38606 CYP3A54P-201ENST00000566950 75 ntBASIC1.45□□□□□ -2.18
ATP6V1AP38606 SNORA70.25-201ENST00000612741 95 ntBASIC1.45□□□□□ -2.18
ATP6V1AP38606 MIR6779-201ENST00000617283 64 ntBASIC1.45□□□□□ -2.18
ATP6V1AP38606 U6.96-201ENST00000636425 70 ntBASIC1.45□□□□□ -2.18
ATP6V1AP38606 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.44□□□□□ -2.18
ATP6V1AP38606 RNA5SP436-201ENST00000516020 115 ntBASIC1.43□□□□□ -2.18
ATP6V1AP38606 MIR4752-201ENST00000579672 72 ntBASIC1.43□□□□□ -2.18
ATP6V1AP38606 RNU6-1312P-201ENST00000362425 108 ntBASIC1.42□□□□□ -2.18
ATP6V1AP38606 Y_RNA.325-201ENST00000365171 122 ntBASIC1.42□□□□□ -2.18
ATP6V1AP38606 RNU6-1184P-201ENST00000384588 108 ntBASIC1.42□□□□□ -2.18
ATP6V1AP38606 RNU6-520P-201ENST00000384717 104 ntBASIC1.41□□□□□ -2.18
ATP6V1AP38606 MIR516B1-201ENST00000385211 90 ntBASIC1.41□□□□□ -2.18
ATP6V1AP38606 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
ATP6V1AP38606 RNA5SP325-201ENST00000363756 130 ntBASIC1.4□□□□□ -2.19
ATP6V1AP38606 RNU6-939P-201ENST00000384634 107 ntBASIC1.4□□□□□ -2.19
ATP6V1AP38606 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
ATP6V1AP38606 MIR373-201ENST00000362273 69 ntBASIC1.39□□□□□ -2.19
ATP6V1AP38606 SNORA9.1-201ENST00000362412 131 ntBASIC1.39□□□□□ -2.19
ATP6V1AP38606 SNORA41B-201ENST00000384785 128 ntBASIC1.39□□□□□ -2.19
ATP6V1AP38606 HMGN2P22-201ENST00000427588 175 ntBASIC1.39□□□□□ -2.19
ATP6V1AP38606 AC243829.6-201ENST00000612652 106 ntBASIC1.39□□□□□ -2.19
ATP6V1AP38606 MIR20A-201ENST00000362279 71 ntBASIC1.37□□□□□ -2.19
ATP6V1AP38606 AL021921.1-201ENST00000442774 93 ntBASIC1.37□□□□□ -2.19
ATP6V1AP38606 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.37□□□□□ -2.19
ATP6V1AP38606 RNU6-1246P-201ENST00000391064 107 ntBASIC1.36□□□□□ -2.19
ATP6V1AP38606 AC244090.1-201ENST00000441884 93 ntBASIC1.36□□□□□ -2.19
ATP6V1AP38606 MIR5706-201ENST00000579841 80 ntBASIC1.36□□□□□ -2.19
ATP6V1AP38606 AL353765.1-201ENST00000605514 183 ntBASIC1.36□□□□□ -2.19
ATP6V1AP38606 SNORD114-21-201ENST00000606412 72 ntBASIC1.36□□□□□ -2.19
ATP6V1AP38606 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.35□□□□□ -2.19
ATP6V1AP38606 RNU6-518P-201ENST00000516056 96 ntBASIC1.35□□□□□ -2.19
ATP6V1AP38606 AC090617.8-201ENST00000623339 167 ntBASIC1.35□□□□□ -2.19
ATP6V1AP38606 SNORA36.2-201ENST00000384004 127 ntBASIC1.34□□□□□ -2.19
ATP6V1AP38606 RNU7-119P-201ENST00000459279 63 ntBASIC1.34□□□□□ -2.19
ATP6V1AP38606 MIR5000-201ENST00000577717 103 ntBASIC1.34□□□□□ -2.19
ATP6V1AP38606 AC211469.2-201ENST00000605461 205 ntBASIC1.34□□□□□ -2.19
ATP6V1AP38606 RNA5SP517-201ENST00000364724 117 ntBASIC1.33□□□□□ -2.2
ATP6V1AP38606 AC069271.1-201ENST00000445577 156 ntBASIC1.33□□□□□ -2.2
ATP6V1AP38606 MIR548AD-201ENST00000584780 82 ntBASIC1.33□□□□□ -2.2
ATP6V1AP38606 RNU1-29P-201ENST00000606574 126 ntBASIC1.33□□□□□ -2.2
ATP6V1AP38606 MIR1255B2-201ENST00000408618 67 ntBASIC1.32□□□□□ -2.2
ATP6V1AP38606 MIR3973-201ENST00000579824 107 ntBASIC1.32□□□□□ -2.2
ATP6V1AP38606 Y_RNA.74-201ENST00000362911 99 ntBASIC1.31□□□□□ -2.2
ATP6V1AP38606 RNY1P8-201ENST00000383970 114 ntBASIC1.31□□□□□ -2.2
ATP6V1AP38606 AC243829.3-201ENST00000622177 108 ntBASIC1.3□□□□□ -2.2
ATP6V1AP38606 RNU4-38P-201ENST00000364472 129 ntBASIC1.29□□□□□ -2.2
ATP6V1AP38606 MIR519A2-201ENST00000384990 87 ntBASIC1.29□□□□□ -2.2
ATP6V1AP38606 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.29□□□□□ -2.2
ATP6V1AP38606 MIR1285-1-201ENST00000408593 84 ntBASIC1.29□□□□□ -2.2
ATP6V1AP38606 RNU6-231P-201ENST00000517122 103 ntBASIC1.29□□□□□ -2.2
ATP6V1AP38606 MIR527-201ENST00000385244 85 ntBASIC1.28□□□□□ -2.2
ATP6V1AP38606 SNORD2-201ENST00000459163 69 ntBASIC1.28□□□□□ -2.2
ATP6V1AP38606 CYP3A137P-201ENST00000562436 69 ntBASIC1.28□□□□□ -2.2
ATP6V1AP38606 SNORA25.18-201ENST00000607153 114 ntBASIC1.28□□□□□ -2.2
ATP6V1AP38606 SNORD114-29-201ENST00000364819 70 ntBASIC1.27□□□□□ -2.21
ATP6V1AP38606 MIR140-201ENST00000385282 100 ntBASIC1.27□□□□□ -2.21
ATP6V1AP38606 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.27□□□□□ -2.21
ATP6V1AP38606 SNORD116-16-201ENST00000384533 92 ntBASIC1.26□□□□□ -2.21
ATP6V1AP38606 MIR532-201ENST00000385025 91 ntBASIC1.26□□□□□ -2.21
ATP6V1AP38606 U7.6-201ENST00000610841 64 ntBASIC1.26□□□□□ -2.21
ATP6V1AP38606 MIR6857-201ENST00000613267 93 ntBASIC1.26□□□□□ -2.21
ATP6V1AP38606 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.26□□□□□ -2.21
ATP6V1AP38606 SNORA2A-201ENST00000383885 135 ntBASIC1.25□□□□□ -2.21
ATP6V1AP38606 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
ATP6V1AP38606 ACA64.5-201ENST00000516207 127 ntBASIC1.25□□□□□ -2.21
ATP6V1AP38606 RNU6-229P-201ENST00000516614 102 ntBASIC1.25□□□□□ -2.21
ATP6V1AP38606 MIR4661-201ENST00000582720 75 ntBASIC1.25□□□□□ -2.21
ATP6V1AP38606 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.25□□□□□ -2.21
ATP6V1AP38606 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
ATP6V1AP38606 Y_RNA.282-201ENST00000364793 102 ntBASIC1.24□□□□□ -2.21
ATP6V1AP38606 Y_RNA.379-201ENST00000365653 102 ntBASIC1.24□□□□□ -2.21
ATP6V1AP38606 SNORD116.2-201ENST00000391251 93 ntBASIC1.24□□□□□ -2.21
ATP6V1AP38606 RNU6-337P-201ENST00000391243 106 ntBASIC1.23□□□□□ -2.21
ATP6V1AP38606 OR2A41P-201ENST00000473586 105 ntBASIC1.23□□□□□ -2.21
ATP6V1AP38606 RNU7-188P-201ENST00000517063 64 ntBASIC1.23□□□□□ -2.21
ATP6V1AP38606 SNORD118-201ENST00000363593 134 ntBASIC1.22□□□□□ -2.21
ATP6V1AP38606 Y_RNA.423-201ENST00000384057 113 ntBASIC1.22□□□□□ -2.21
ATP6V1AP38606 SNORA40.8-201ENST00000411034 126 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 346.6 ms