Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 VTRNA1-3-201ENST00000365645 89 ntBASIC1.22□□□□□ -2.21
RXRBP28702 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RXRBP28702 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
RXRBP28702 SCARNA21.1-201ENST00000515996 128 ntBASIC1.21□□□□□ -2.22
RXRBP28702 SNORA25.5-201ENST00000363782 126 ntBASIC1.2□□□□□ -2.22
RXRBP28702 RNA5SP192-201ENST00000364404 120 ntBASIC1.2□□□□□ -2.22
RXRBP28702 SNORD99-201ENST00000408612 74 ntBASIC1.2□□□□□ -2.22
RXRBP28702 snoU13.13-201ENST00000458842 104 ntBASIC1.2□□□□□ -2.22
RXRBP28702 RNU6-1089P-201ENST00000516473 104 ntBASIC1.2□□□□□ -2.22
RXRBP28702 RNA5SP299-201ENST00000391203 116 ntBASIC1.19□□□□□ -2.22
RXRBP28702 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
RXRBP28702 Y_RNA.633-201ENST00000459107 95 ntBASIC1.19□□□□□ -2.22
RXRBP28702 RNA5SP215-201ENST00000363440 122 ntBASIC1.18□□□□□ -2.22
RXRBP28702 RNU6-829P-201ENST00000363700 112 ntBASIC1.18□□□□□ -2.22
RXRBP28702 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RXRBP28702 AL157398.1-201ENST00000452981 186 ntBASIC1.18□□□□□ -2.22
RXRBP28702 AC011195.1-201ENST00000578177 177 ntBASIC1.18□□□□□ -2.22
RXRBP28702 MIR548AE1-201ENST00000583292 70 ntBASIC1.18□□□□□ -2.22
RXRBP28702 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.18□□□□□ -2.22
RXRBP28702 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.18□□□□□ -2.22
RXRBP28702 Y_RNA.250-201ENST00000364542 110 ntBASIC1.17□□□□□ -2.22
RXRBP28702 MIR521-2-201ENST00000384818 87 ntBASIC1.17□□□□□ -2.22
RXRBP28702 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.17□□□□□ -2.22
RXRBP28702 MIR7107-201ENST00000611489 80 ntBASIC1.17□□□□□ -2.22
RXRBP28702 SNORD114-4-201ENST00000363962 75 ntBASIC1.16□□□□□ -2.22
RXRBP28702 MIR582-201ENST00000365731 98 ntBASIC1.16□□□□□ -2.22
RXRBP28702 MIR652-201ENST00000385278 98 ntBASIC1.16□□□□□ -2.22
RXRBP28702 RNA5SP94-201ENST00000516917 108 ntBASIC1.16□□□□□ -2.22
RXRBP28702 AC103810.9-201ENST00000606688 112 ntBASIC1.16□□□□□ -2.22
RXRBP28702 RNA5SP227-201ENST00000516184 113 ntBASIC1.15□□□□□ -2.23
RXRBP28702 RNA5SP285-201ENST00000516619 119 ntBASIC1.15□□□□□ -2.23
RXRBP28702 RNA5SP268-201ENST00000516828 124 ntBASIC1.15□□□□□ -2.23
RXRBP28702 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.15□□□□□ -2.23
RXRBP28702 MIR4661-201ENST00000582720 75 ntBASIC1.15□□□□□ -2.23
RXRBP28702 RNU6-1079P-201ENST00000362861 110 ntBASIC1.14□□□□□ -2.23
RXRBP28702 SCARNA17.3-201ENST00000516381 125 ntBASIC1.14□□□□□ -2.23
RXRBP28702 RNU1-29P-201ENST00000606574 126 ntBASIC1.14□□□□□ -2.23
RXRBP28702 MIR6835-201ENST00000621552 64 ntBASIC1.14□□□□□ -2.23
RXRBP28702 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.14□□□□□ -2.23
RXRBP28702 RNU6-446P-201ENST00000362827 106 ntBASIC1.13□□□□□ -2.23
RXRBP28702 SNORA75.1-201ENST00000391130 148 ntBASIC1.13□□□□□ -2.23
RXRBP28702 MIR466-201ENST00000580653 84 ntBASIC1.13□□□□□ -2.23
RXRBP28702 SNORA70.25-201ENST00000612741 95 ntBASIC1.13□□□□□ -2.23
RXRBP28702 Y_RNA.236-201ENST00000364427 111 ntBASIC1.12□□□□□ -2.23
RXRBP28702 Y_RNA.407-201ENST00000383986 113 ntBASIC1.12□□□□□ -2.23
RXRBP28702 RNU6-1162P-201ENST00000384443 104 ntBASIC1.12□□□□□ -2.23
RXRBP28702 MIR508-201ENST00000384857 115 ntBASIC1.12□□□□□ -2.23
RXRBP28702 MIR548E-201ENST00000408287 88 ntBASIC1.12□□□□□ -2.23
RXRBP28702 U2.7-201ENST00000619197 100 ntBASIC1.12□□□□□ -2.23
RXRBP28702 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
RXRBP28702 RNU6-940P-201ENST00000363433 104 ntBASIC1.11□□□□□ -2.23
RXRBP28702 SNORA33.1-201ENST00000364957 130 ntBASIC1.11□□□□□ -2.23
RXRBP28702 RNY1P8-201ENST00000383970 114 ntBASIC1.11□□□□□ -2.23
RXRBP28702 AC021146.9-201ENST00000512503 156 ntBASIC1.11□□□□□ -2.23
RXRBP28702 RNU4-45P-201ENST00000365469 141 ntBASIC1.1□□□□□ -2.23
RXRBP28702 SNORD110-201ENST00000408189 75 ntBASIC1.1□□□□□ -2.23
RXRBP28702 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
RXRBP28702 RNU7-174P-201ENST00000516248 59 ntBASIC1.1□□□□□ -2.23
RXRBP28702 MIR4752-201ENST00000579672 72 ntBASIC1.1□□□□□ -2.23
RXRBP28702 MIR4473-201ENST00000583731 91 ntBASIC1.1□□□□□ -2.23
RXRBP28702 MIR548V-201ENST00000584165 80 ntBASIC1.1□□□□□ -2.23
RXRBP28702 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
RXRBP28702 RNA5SP347-201ENST00000362445 119 ntBASIC1.09□□□□□ -2.23
RXRBP28702 AC006210.1-201ENST00000424882 111 ntBASIC1.09□□□□□ -2.23
RXRBP28702 RNU6-122P-201ENST00000516818 107 ntBASIC1.09□□□□□ -2.23
RXRBP28702 AL353765.1-201ENST00000605514 183 ntBASIC1.09□□□□□ -2.23
RXRBP28702 SNORD60.1-201ENST00000362451 73 ntBASIC1.08□□□□□ -2.24
RXRBP28702 MIR630-201ENST00000384957 97 ntBASIC1.08□□□□□ -2.24
RXRBP28702 HMGN2P22-201ENST00000427588 175 ntBASIC1.08□□□□□ -2.24
RXRBP28702 RNU6-92P-201ENST00000605893 104 ntBASIC1.08□□□□□ -2.24
RXRBP28702 U4.4-201ENST00000620626 117 ntBASIC1.08□□□□□ -2.24
RXRBP28702 Y_RNA.125-201ENST00000363371 111 ntBASIC1.07□□□□□ -2.24
RXRBP28702 SNORA63.6-201ENST00000364921 119 ntBASIC1.07□□□□□ -2.24
RXRBP28702 SNORA15B-2-201ENST00000384058 135 ntBASIC1.07□□□□□ -2.24
RXRBP28702 SNORA15B-1-201ENST00000384334 135 ntBASIC1.07□□□□□ -2.24
RXRBP28702 RNU6-614P-201ENST00000384369 107 ntBASIC1.07□□□□□ -2.24
RXRBP28702 U6.59-201ENST00000615686 107 ntBASIC1.07□□□□□ -2.24
RXRBP28702 AC243829.3-201ENST00000622177 108 ntBASIC1.07□□□□□ -2.24
RXRBP28702 RNU6-141P-201ENST00000410499 105 ntBASIC1.05□□□□□ -2.24
RXRBP28702 RNA5SP222-201ENST00000411039 105 ntBASIC1.05□□□□□ -2.24
RXRBP28702 RNU6-698P-201ENST00000363523 107 ntBASIC1.04□□□□□ -2.24
RXRBP28702 RNA5SP517-201ENST00000364724 117 ntBASIC1.04□□□□□ -2.24
RXRBP28702 RNU6-34P-201ENST00000364874 107 ntBASIC1.04□□□□□ -2.24
RXRBP28702 RNU6-302P-201ENST00000365249 107 ntBASIC1.04□□□□□ -2.24
RXRBP28702 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.04□□□□□ -2.24
RXRBP28702 MIR3938-201ENST00000582157 103 ntBASIC1.04□□□□□ -2.24
RXRBP28702 SNORD113-4-201ENST00000364802 75 ntBASIC1.03□□□□□ -2.24
RXRBP28702 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.03□□□□□ -2.24
RXRBP28702 AC090617.8-201ENST00000623339 167 ntBASIC1.03□□□□□ -2.24
RXRBP28702 MIR548C-201ENST00000384815 97 ntBASIC1.02□□□□□ -2.25
RXRBP28702 MIR517B-201ENST00000385102 67 ntBASIC1.02□□□□□ -2.25
RXRBP28702 AC069271.1-201ENST00000445577 156 ntBASIC1.02□□□□□ -2.25
RXRBP28702 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
RXRBP28702 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1□□□□□ -2.25
RXRBP28702 MIR516B1-201ENST00000385211 90 ntBASIC1□□□□□ -2.25
RXRBP28702 ACA64.5-201ENST00000516207 127 ntBASIC1□□□□□ -2.25
RXRBP28702 uc_338.10-201ENST00000621872 182 ntBASIC1□□□□□ -2.25
RXRBP28702 MIR608-201ENST00000384820 100 ntBASIC0.99□□□□□ -2.25
RXRBP28702 MIR5706-201ENST00000579841 80 ntBASIC0.99□□□□□ -2.25
RXRBP28702 SNORA25.18-201ENST00000607153 114 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms