Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 RNU6-24P-201ENST00000384440 107 ntBASIC0.26□□□□□ -2.37
PTX3P26022 RNA5SP395-201ENST00000516567 118 ntBASIC0.26□□□□□ -2.37
PTX3P26022 SCARNA11.2-201ENST00000517183 154 ntBASIC0.26□□□□□ -2.37
PTX3P26022 SNORA42.1-201ENST00000363515 137 ntBASIC0.25□□□□□ -2.37
PTX3P26022 Y_RNA.250-201ENST00000364542 110 ntBASIC0.25□□□□□ -2.37
PTX3P26022 RNU6-857P-201ENST00000515893 110 ntBASIC0.25□□□□□ -2.37
PTX3P26022 SNORA62.5-201ENST00000516634 120 ntBASIC0.25□□□□□ -2.37
PTX3P26022 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
PTX3P26022 MIR3675-201ENST00000583661 73 ntBASIC0.25□□□□□ -2.37
PTX3P26022 AC010487.4-201ENST00000637027 61 ntBASIC0.25□□□□□ -2.37
PTX3P26022 SNORA2.1-201ENST00000363089 137 ntBASIC0.24□□□□□ -2.37
PTX3P26022 RN7SL793P-201ENST00000583259 296 ntBASIC0.24□□□□□ -2.37
PTX3P26022 MIR3657-201ENST00000584818 117 ntBASIC0.24□□□□□ -2.37
PTX3P26022 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
PTX3P26022 RNU6-990P-201ENST00000364385 104 ntBASIC0.23□□□□□ -2.37
PTX3P26022 SNORA8.1-201ENST00000384250 140 ntBASIC0.23□□□□□ -2.37
PTX3P26022 MIR610-201ENST00000385139 96 ntBASIC0.23□□□□□ -2.37
PTX3P26022 MIR548E-201ENST00000408287 88 ntBASIC0.23□□□□□ -2.37
PTX3P26022 RNA5SP436-201ENST00000516020 115 ntBASIC0.23□□□□□ -2.37
PTX3P26022 MIR4484-201ENST00000582855 83 ntBASIC0.23□□□□□ -2.37
PTX3P26022 SNORA63.6-201ENST00000364921 119 ntBASIC0.22□□□□□ -2.37
PTX3P26022 MIR193B-201ENST00000384907 83 ntBASIC0.22□□□□□ -2.37
PTX3P26022 MIR643-201ENST00000385267 97 ntBASIC0.22□□□□□ -2.37
PTX3P26022 MIR106A-201ENST00000384870 81 ntBASIC0.21□□□□□ -2.38
PTX3P26022 RNU6-1275P-201ENST00000391087 107 ntBASIC0.21□□□□□ -2.38
PTX3P26022 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.21□□□□□ -2.38
PTX3P26022 RNU6-175P-201ENST00000516896 107 ntBASIC0.21□□□□□ -2.38
PTX3P26022 RN7SL660P-201ENST00000614852 299 ntBASIC0.21□□□□□ -2.38
PTX3P26022 MIR582-201ENST00000365731 98 ntBASIC0.2□□□□□ -2.38
PTX3P26022 MIR203A-201ENST00000384836 110 ntBASIC0.2□□□□□ -2.38
PTX3P26022 SCARNA18B-201ENST00000458806 135 ntBASIC0.2□□□□□ -2.38
PTX3P26022 U7.4-201ENST00000614961 63 ntBASIC0.2□□□□□ -2.38
PTX3P26022 RNU6-330P-201ENST00000363015 107 ntBASIC0.19□□□□□ -2.38
PTX3P26022 RNA5SP325-201ENST00000363756 130 ntBASIC0.19□□□□□ -2.38
PTX3P26022 RNA5SP225-201ENST00000410874 135 ntBASIC0.19□□□□□ -2.38
PTX3P26022 Y_RNA.681-201ENST00000516445 113 ntBASIC0.19□□□□□ -2.38
PTX3P26022 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
PTX3P26022 RNA5SP214-201ENST00000363378 118 ntBASIC0.18□□□□□ -2.38
PTX3P26022 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
PTX3P26022 MIR548H2-201ENST00000408874 88 ntBASIC0.18□□□□□ -2.38
PTX3P26022 AC104408.1-201ENST00000605241 170 ntBASIC0.18□□□□□ -2.38
PTX3P26022 AC021146.9-201ENST00000512503 156 ntBASIC0.17□□□□□ -2.38
PTX3P26022 SNORA40.17-201ENST00000517256 115 ntBASIC0.17□□□□□ -2.38
PTX3P26022 MIR1273G-201ENST00000577677 100 ntBASIC0.17□□□□□ -2.38
PTX3P26022 AC145423.2-201ENST00000610631 239 ntBASIC0.17□□□□□ -2.38
PTX3P26022 SNORD114-9-201ENST00000364370 72 ntBASIC0.16□□□□□ -2.38
PTX3P26022 SNORA15B-2-201ENST00000384058 135 ntBASIC0.16□□□□□ -2.38
PTX3P26022 SNORA15B-1-201ENST00000384334 135 ntBASIC0.16□□□□□ -2.38
PTX3P26022 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
PTX3P26022 Y_RNA.633-201ENST00000459107 95 ntBASIC0.16□□□□□ -2.38
PTX3P26022 RNU6-180P-201ENST00000516697 61 ntBASIC0.16□□□□□ -2.38
PTX3P26022 CR383656.4-201ENST00000546909 122 ntBASIC0.16□□□□□ -2.38
PTX3P26022 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.16□□□□□ -2.38
PTX3P26022 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
PTX3P26022 MIR924-201ENST00000638017 53 ntBASIC0.15□□□□□ -2.39
PTX3P26022 MIR148A-201ENST00000362215 68 ntBASIC0.14□□□□□ -2.39
PTX3P26022 MIR489-201ENST00000384923 84 ntBASIC0.14□□□□□ -2.39
PTX3P26022 MIR6739-201ENST00000622461 75 ntBASIC0.14□□□□□ -2.39
PTX3P26022 MIR6514-201ENST00000622549 70 ntBASIC0.14□□□□□ -2.39
PTX3P26022 RNA5SP98-201ENST00000363158 137 ntBASIC0.13□□□□□ -2.39
PTX3P26022 RNU6-1036P-201ENST00000383959 104 ntBASIC0.13□□□□□ -2.39
PTX3P26022 MIR145-201ENST00000384967 88 ntBASIC0.13□□□□□ -2.39
PTX3P26022 RNA5SP163-201ENST00000410304 99 ntBASIC0.13□□□□□ -2.39
PTX3P26022 RNA5SP147-201ENST00000516493 109 ntBASIC0.13□□□□□ -2.39
PTX3P26022 MIR8053-201ENST00000613344 75 ntBASIC0.13□□□□□ -2.39
PTX3P26022 PVT1_3.1-201ENST00000620853 95 ntBASIC0.13□□□□□ -2.39
PTX3P26022 SNORD45.1-201ENST00000363181 77 ntBASIC0.12□□□□□ -2.39
PTX3P26022 SNORD114-26-201ENST00000363543 72 ntBASIC0.12□□□□□ -2.39
PTX3P26022 RNU6-1162P-201ENST00000384443 104 ntBASIC0.12□□□□□ -2.39
PTX3P26022 MIR593-201ENST00000384856 100 ntBASIC0.12□□□□□ -2.39
PTX3P26022 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
PTX3P26022 RNU6-70P-201ENST00000516438 60 ntBASIC0.12□□□□□ -2.39
PTX3P26022 RNA5SP480-201ENST00000516840 109 ntBASIC0.12□□□□□ -2.39
PTX3P26022 RNU7-159P-201ENST00000459284 62 ntBASIC0.11□□□□□ -2.39
PTX3P26022 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.11□□□□□ -2.39
PTX3P26022 RNU6-411P-201ENST00000384451 107 ntBASIC0.1□□□□□ -2.39
PTX3P26022 MIR521-2-201ENST00000384818 87 ntBASIC0.1□□□□□ -2.39
PTX3P26022 SNORA49-201ENST00000386157 136 ntBASIC0.1□□□□□ -2.39
PTX3P26022 snoU13.13-201ENST00000458842 104 ntBASIC0.1□□□□□ -2.39
PTX3P26022 RNU7-165P-201ENST00000458864 60 ntBASIC0.1□□□□□ -2.39
PTX3P26022 MIR4662A-201ENST00000637499 67 ntBASIC0.1□□□□□ -2.39
PTX3P26022 MIR3134-201ENST00000579433 74 ntBASIC0.09□□□□□ -2.4
PTX3P26022 MIR4514-201ENST00000581410 57 ntBASIC0.09□□□□□ -2.4
PTX3P26022 AC023932.2-201ENST00000603176 175 ntBASIC0.09□□□□□ -2.4
PTX3P26022 Y_RNA.788-201ENST00000622394 112 ntBASIC0.09□□□□□ -2.4
PTX3P26022 SNORD115-25-201ENST00000362619 82 ntBASIC0.08□□□□□ -2.4
PTX3P26022 Y_RNA.244-201ENST00000364484 109 ntBASIC0.08□□□□□ -2.4
PTX3P26022 RNU6-604P-201ENST00000390917 100 ntBASIC0.08□□□□□ -2.4
PTX3P26022 MIR8087-201ENST00000612745 78 ntBASIC0.08□□□□□ -2.4
PTX3P26022 MIR7111-201ENST00000619751 72 ntBASIC0.08□□□□□ -2.4
PTX3P26022 MIR664A-201ENST00000626086 82 ntBASIC0.08□□□□□ -2.4
PTX3P26022 MIR330-201ENST00000362196 94 ntBASIC0.07□□□□□ -2.4
PTX3P26022 RNU6-587P-201ENST00000391282 106 ntBASIC0.07□□□□□ -2.4
PTX3P26022 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
PTX3P26022 MIR371B-201ENST00000638082 66 ntBASIC0.07□□□□□ -2.4
PTX3P26022 SNORD114-5-201ENST00000362928 70 ntBASIC0.06□□□□□ -2.4
PTX3P26022 RNU6-1241P-201ENST00000384536 107 ntBASIC0.06□□□□□ -2.4
PTX3P26022 RNU6-638P-201ENST00000516582 104 ntBASIC0.06□□□□□ -2.4
PTX3P26022 MIR154-201ENST00000385243 84 ntBASIC0.05□□□□□ -2.4
PTX3P26022 AC104692.1-201ENST00000472406 90 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 234.4 ms