Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 RNU6-24P-201ENST00000384440 107 ntBASIC0.26□□□□□ -2.37
PTX3P26022 RNA5SP395-201ENST00000516567 118 ntBASIC0.26□□□□□ -2.37
PTX3P26022 SCARNA11.2-201ENST00000517183 154 ntBASIC0.26□□□□□ -2.37
PTX3P26022 SNORA42.1-201ENST00000363515 137 ntBASIC0.25□□□□□ -2.37
PTX3P26022 Y_RNA.250-201ENST00000364542 110 ntBASIC0.25□□□□□ -2.37
PTX3P26022 RNU6-857P-201ENST00000515893 110 ntBASIC0.25□□□□□ -2.37
PTX3P26022 SNORA62.5-201ENST00000516634 120 ntBASIC0.25□□□□□ -2.37
PTX3P26022 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
PTX3P26022 MIR3675-201ENST00000583661 73 ntBASIC0.25□□□□□ -2.37
PTX3P26022 AC010487.4-201ENST00000637027 61 ntBASIC0.25□□□□□ -2.37
PTX3P26022 SNORA2.1-201ENST00000363089 137 ntBASIC0.24□□□□□ -2.37
PTX3P26022 RN7SL793P-201ENST00000583259 296 ntBASIC0.24□□□□□ -2.37
PTX3P26022 MIR3657-201ENST00000584818 117 ntBASIC0.24□□□□□ -2.37
PTX3P26022 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
PTX3P26022 RNU6-990P-201ENST00000364385 104 ntBASIC0.23□□□□□ -2.37
PTX3P26022 SNORA8.1-201ENST00000384250 140 ntBASIC0.23□□□□□ -2.37
PTX3P26022 MIR610-201ENST00000385139 96 ntBASIC0.23□□□□□ -2.37
PTX3P26022 MIR548E-201ENST00000408287 88 ntBASIC0.23□□□□□ -2.37
PTX3P26022 RNA5SP436-201ENST00000516020 115 ntBASIC0.23□□□□□ -2.37
PTX3P26022 MIR4484-201ENST00000582855 83 ntBASIC0.23□□□□□ -2.37
PTX3P26022 SNORA63.6-201ENST00000364921 119 ntBASIC0.22□□□□□ -2.37
PTX3P26022 MIR193B-201ENST00000384907 83 ntBASIC0.22□□□□□ -2.37
PTX3P26022 MIR643-201ENST00000385267 97 ntBASIC0.22□□□□□ -2.37
PTX3P26022 MIR106A-201ENST00000384870 81 ntBASIC0.21□□□□□ -2.38
PTX3P26022 RNU6-1275P-201ENST00000391087 107 ntBASIC0.21□□□□□ -2.38
PTX3P26022 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.21□□□□□ -2.38
PTX3P26022 RNU6-175P-201ENST00000516896 107 ntBASIC0.21□□□□□ -2.38
PTX3P26022 RN7SL660P-201ENST00000614852 299 ntBASIC0.21□□□□□ -2.38
PTX3P26022 MIR582-201ENST00000365731 98 ntBASIC0.2□□□□□ -2.38
PTX3P26022 MIR203A-201ENST00000384836 110 ntBASIC0.2□□□□□ -2.38
PTX3P26022 SCARNA18B-201ENST00000458806 135 ntBASIC0.2□□□□□ -2.38
PTX3P26022 U7.4-201ENST00000614961 63 ntBASIC0.2□□□□□ -2.38
PTX3P26022 RNU6-330P-201ENST00000363015 107 ntBASIC0.19□□□□□ -2.38
PTX3P26022 RNA5SP325-201ENST00000363756 130 ntBASIC0.19□□□□□ -2.38
PTX3P26022 RNA5SP225-201ENST00000410874 135 ntBASIC0.19□□□□□ -2.38
PTX3P26022 Y_RNA.681-201ENST00000516445 113 ntBASIC0.19□□□□□ -2.38
PTX3P26022 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
PTX3P26022 RNA5SP214-201ENST00000363378 118 ntBASIC0.18□□□□□ -2.38
PTX3P26022 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
PTX3P26022 MIR548H2-201ENST00000408874 88 ntBASIC0.18□□□□□ -2.38
PTX3P26022 AC104408.1-201ENST00000605241 170 ntBASIC0.18□□□□□ -2.38
PTX3P26022 AC021146.9-201ENST00000512503 156 ntBASIC0.17□□□□□ -2.38
PTX3P26022 SNORA40.17-201ENST00000517256 115 ntBASIC0.17□□□□□ -2.38
PTX3P26022 MIR1273G-201ENST00000577677 100 ntBASIC0.17□□□□□ -2.38
PTX3P26022 AC145423.2-201ENST00000610631 239 ntBASIC0.17□□□□□ -2.38
PTX3P26022 SNORD114-9-201ENST00000364370 72 ntBASIC0.16□□□□□ -2.38
PTX3P26022 SNORA15B-2-201ENST00000384058 135 ntBASIC0.16□□□□□ -2.38
PTX3P26022 SNORA15B-1-201ENST00000384334 135 ntBASIC0.16□□□□□ -2.38
PTX3P26022 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
PTX3P26022 Y_RNA.633-201ENST00000459107 95 ntBASIC0.16□□□□□ -2.38
PTX3P26022 RNU6-180P-201ENST00000516697 61 ntBASIC0.16□□□□□ -2.38
PTX3P26022 CR383656.4-201ENST00000546909 122 ntBASIC0.16□□□□□ -2.38
PTX3P26022 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.16□□□□□ -2.38
PTX3P26022 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
PTX3P26022 MIR924-201ENST00000638017 53 ntBASIC0.15□□□□□ -2.39
PTX3P26022 MIR148A-201ENST00000362215 68 ntBASIC0.14□□□□□ -2.39
PTX3P26022 MIR489-201ENST00000384923 84 ntBASIC0.14□□□□□ -2.39
PTX3P26022 MIR6739-201ENST00000622461 75 ntBASIC0.14□□□□□ -2.39
PTX3P26022 MIR6514-201ENST00000622549 70 ntBASIC0.14□□□□□ -2.39
PTX3P26022 RNA5SP98-201ENST00000363158 137 ntBASIC0.13□□□□□ -2.39
PTX3P26022 RNU6-1036P-201ENST00000383959 104 ntBASIC0.13□□□□□ -2.39
PTX3P26022 MIR145-201ENST00000384967 88 ntBASIC0.13□□□□□ -2.39
PTX3P26022 RNA5SP163-201ENST00000410304 99 ntBASIC0.13□□□□□ -2.39
PTX3P26022 RNA5SP147-201ENST00000516493 109 ntBASIC0.13□□□□□ -2.39
PTX3P26022 MIR8053-201ENST00000613344 75 ntBASIC0.13□□□□□ -2.39
PTX3P26022 PVT1_3.1-201ENST00000620853 95 ntBASIC0.13□□□□□ -2.39
PTX3P26022 SNORD45.1-201ENST00000363181 77 ntBASIC0.12□□□□□ -2.39
PTX3P26022 SNORD114-26-201ENST00000363543 72 ntBASIC0.12□□□□□ -2.39
PTX3P26022 RNU6-1162P-201ENST00000384443 104 ntBASIC0.12□□□□□ -2.39
PTX3P26022 MIR593-201ENST00000384856 100 ntBASIC0.12□□□□□ -2.39
PTX3P26022 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
PTX3P26022 RNU6-70P-201ENST00000516438 60 ntBASIC0.12□□□□□ -2.39
PTX3P26022 RNA5SP480-201ENST00000516840 109 ntBASIC0.12□□□□□ -2.39
PTX3P26022 RNU7-159P-201ENST00000459284 62 ntBASIC0.11□□□□□ -2.39
PTX3P26022 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.11□□□□□ -2.39
PTX3P26022 RNU6-411P-201ENST00000384451 107 ntBASIC0.1□□□□□ -2.39
PTX3P26022 MIR521-2-201ENST00000384818 87 ntBASIC0.1□□□□□ -2.39
PTX3P26022 SNORA49-201ENST00000386157 136 ntBASIC0.1□□□□□ -2.39
PTX3P26022 snoU13.13-201ENST00000458842 104 ntBASIC0.1□□□□□ -2.39
PTX3P26022 RNU7-165P-201ENST00000458864 60 ntBASIC0.1□□□□□ -2.39
PTX3P26022 MIR4662A-201ENST00000637499 67 ntBASIC0.1□□□□□ -2.39
PTX3P26022 MIR3134-201ENST00000579433 74 ntBASIC0.09□□□□□ -2.4
PTX3P26022 MIR4514-201ENST00000581410 57 ntBASIC0.09□□□□□ -2.4
PTX3P26022 AC023932.2-201ENST00000603176 175 ntBASIC0.09□□□□□ -2.4
PTX3P26022 Y_RNA.788-201ENST00000622394 112 ntBASIC0.09□□□□□ -2.4
PTX3P26022 SNORD115-25-201ENST00000362619 82 ntBASIC0.08□□□□□ -2.4
PTX3P26022 Y_RNA.244-201ENST00000364484 109 ntBASIC0.08□□□□□ -2.4
PTX3P26022 RNU6-604P-201ENST00000390917 100 ntBASIC0.08□□□□□ -2.4
PTX3P26022 MIR8087-201ENST00000612745 78 ntBASIC0.08□□□□□ -2.4
PTX3P26022 MIR7111-201ENST00000619751 72 ntBASIC0.08□□□□□ -2.4
PTX3P26022 MIR664A-201ENST00000626086 82 ntBASIC0.08□□□□□ -2.4
PTX3P26022 MIR330-201ENST00000362196 94 ntBASIC0.07□□□□□ -2.4
PTX3P26022 RNU6-587P-201ENST00000391282 106 ntBASIC0.07□□□□□ -2.4
PTX3P26022 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
PTX3P26022 MIR371B-201ENST00000638082 66 ntBASIC0.07□□□□□ -2.4
PTX3P26022 SNORD114-5-201ENST00000362928 70 ntBASIC0.06□□□□□ -2.4
PTX3P26022 RNU6-1241P-201ENST00000384536 107 ntBASIC0.06□□□□□ -2.4
PTX3P26022 RNU6-638P-201ENST00000516582 104 ntBASIC0.06□□□□□ -2.4
PTX3P26022 MIR154-201ENST00000385243 84 ntBASIC0.05□□□□□ -2.4
PTX3P26022 AC104692.1-201ENST00000472406 90 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms