Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 MIR548E-201ENST00000408287 88 ntBASIC0.3□□□□□ -2.36
XPAP23025 RNA5SP480-201ENST00000516840 109 ntBASIC0.3□□□□□ -2.36
XPAP23025 SCARNA11.2-201ENST00000517183 154 ntBASIC0.3□□□□□ -2.36
XPAP23025 RN7SL660P-201ENST00000614852 299 ntBASIC0.3□□□□□ -2.36
XPAP23025 RNU6-1275P-201ENST00000391087 107 ntBASIC0.29□□□□□ -2.36
XPAP23025 RNU6-782P-201ENST00000516852 104 ntBASIC0.29□□□□□ -2.36
XPAP23025 RNU6-260P-201ENST00000384092 107 ntBASIC0.28□□□□□ -2.36
XPAP23025 MIR548H2-201ENST00000408874 88 ntBASIC0.28□□□□□ -2.36
XPAP23025 RNU6-380P-201ENST00000410207 107 ntBASIC0.28□□□□□ -2.36
XPAP23025 RNA5SP147-201ENST00000516493 109 ntBASIC0.28□□□□□ -2.36
XPAP23025 RNU6-175P-201ENST00000516896 107 ntBASIC0.28□□□□□ -2.36
XPAP23025 MIR3657-201ENST00000584818 117 ntBASIC0.28□□□□□ -2.36
XPAP23025 MIR664A-201ENST00000626086 82 ntBASIC0.28□□□□□ -2.36
XPAP23025 MIR4315-1-201ENST00000636800 73 ntBASIC0.28□□□□□ -2.36
XPAP23025 MIR4315-2-201ENST00000640925 73 ntBASIC0.28□□□□□ -2.36
XPAP23025 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
XPAP23025 SNORD114-29-201ENST00000364819 70 ntBASIC0.27□□□□□ -2.37
XPAP23025 SNORA8.1-201ENST00000384250 140 ntBASIC0.27□□□□□ -2.37
XPAP23025 MIR876-201ENST00000401147 81 ntBASIC0.27□□□□□ -2.37
XPAP23025 snoU13.13-201ENST00000458842 104 ntBASIC0.27□□□□□ -2.37
XPAP23025 RNU6-807P-201ENST00000516805 107 ntBASIC0.27□□□□□ -2.37
XPAP23025 MIR1297-201ENST00000637311 77 ntBASIC0.27□□□□□ -2.37
XPAP23025 SNORD114-26-201ENST00000363543 72 ntBASIC0.26□□□□□ -2.37
XPAP23025 RNU6-752P-201ENST00000516376 102 ntBASIC0.26□□□□□ -2.37
XPAP23025 Y_RNA.685-201ENST00000516532 108 ntBASIC0.26□□□□□ -2.37
XPAP23025 MIR20A-201ENST00000362279 71 ntBASIC0.25□□□□□ -2.37
XPAP23025 MIR1273G-201ENST00000577677 100 ntBASIC0.25□□□□□ -2.37
XPAP23025 MIR3675-201ENST00000583661 73 ntBASIC0.25□□□□□ -2.37
XPAP23025 RNA5SP325-201ENST00000363756 130 ntBASIC0.24□□□□□ -2.37
XPAP23025 AC244090.1-201ENST00000441884 93 ntBASIC0.24□□□□□ -2.37
XPAP23025 AC104408.1-201ENST00000605241 170 ntBASIC0.24□□□□□ -2.37
XPAP23025 RNU6-24P-201ENST00000384440 107 ntBASIC0.23□□□□□ -2.37
XPAP23025 Y_RNA.540-201ENST00000384638 111 ntBASIC0.23□□□□□ -2.37
XPAP23025 SNORA75.1-201ENST00000391130 148 ntBASIC0.23□□□□□ -2.37
XPAP23025 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
XPAP23025 SNORA62.5-201ENST00000516634 120 ntBASIC0.22□□□□□ -2.37
XPAP23025 MIR3134-201ENST00000579433 74 ntBASIC0.22□□□□□ -2.37
XPAP23025 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
XPAP23025 MIR924-201ENST00000638017 53 ntBASIC0.22□□□□□ -2.37
XPAP23025 SNORA2.1-201ENST00000363089 137 ntBASIC0.21□□□□□ -2.38
XPAP23025 RNA5SP214-201ENST00000363378 118 ntBASIC0.21□□□□□ -2.38
XPAP23025 RNU6-1036P-201ENST00000383959 104 ntBASIC0.21□□□□□ -2.38
XPAP23025 MIR593-201ENST00000384856 100 ntBASIC0.21□□□□□ -2.38
XPAP23025 SNORA49-201ENST00000386157 136 ntBASIC0.21□□□□□ -2.38
XPAP23025 MIR4514-201ENST00000581410 57 ntBASIC0.21□□□□□ -2.38
XPAP23025 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.2□□□□□ -2.38
XPAP23025 Y_RNA.205-201ENST00000364128 113 ntBASIC0.2□□□□□ -2.38
XPAP23025 SNORA63.6-201ENST00000364921 119 ntBASIC0.2□□□□□ -2.38
XPAP23025 AC021146.9-201ENST00000512503 156 ntBASIC0.2□□□□□ -2.38
XPAP23025 Y_RNA.244-201ENST00000364484 109 ntBASIC0.19□□□□□ -2.38
XPAP23025 MIR106A-201ENST00000384870 81 ntBASIC0.19□□□□□ -2.38
XPAP23025 MIR889-201ENST00000401280 79 ntBASIC0.19□□□□□ -2.38
XPAP23025 RNA5SP163-201ENST00000410304 99 ntBASIC0.19□□□□□ -2.38
XPAP23025 SNORA42.1-201ENST00000363515 137 ntBASIC0.18□□□□□ -2.38
XPAP23025 SNORD114-9-201ENST00000364370 72 ntBASIC0.18□□□□□ -2.38
XPAP23025 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
XPAP23025 RNU6-70P-201ENST00000516438 60 ntBASIC0.18□□□□□ -2.38
XPAP23025 AC145423.2-201ENST00000610631 239 ntBASIC0.18□□□□□ -2.38
XPAP23025 U7.4-201ENST00000614961 63 ntBASIC0.18□□□□□ -2.38
XPAP23025 MIR6514-201ENST00000622549 70 ntBASIC0.18□□□□□ -2.38
XPAP23025 SNORD45.1-201ENST00000363181 77 ntBASIC0.17□□□□□ -2.38
XPAP23025 MIR145-201ENST00000384967 88 ntBASIC0.17□□□□□ -2.38
XPAP23025 MIR7-2-201ENST00000384970 110 ntBASIC0.17□□□□□ -2.38
XPAP23025 MIR610-201ENST00000385139 96 ntBASIC0.17□□□□□ -2.38
XPAP23025 RNU6-604P-201ENST00000390917 100 ntBASIC0.17□□□□□ -2.38
XPAP23025 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
XPAP23025 Y_RNA.633-201ENST00000459107 95 ntBASIC0.17□□□□□ -2.38
XPAP23025 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.17□□□□□ -2.38
XPAP23025 SNORD114-5-201ENST00000362928 70 ntBASIC0.16□□□□□ -2.38
XPAP23025 MIR330-201ENST00000362196 94 ntBASIC0.15□□□□□ -2.39
XPAP23025 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
XPAP23025 MIR8087-201ENST00000612745 78 ntBASIC0.15□□□□□ -2.39
XPAP23025 MIR6779-201ENST00000617283 64 ntBASIC0.15□□□□□ -2.39
XPAP23025 Y_RNA.681-201ENST00000516445 113 ntBASIC0.14□□□□□ -2.39
XPAP23025 RNU6-180P-201ENST00000516697 61 ntBASIC0.14□□□□□ -2.39
XPAP23025 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.14□□□□□ -2.39
XPAP23025 SNORD115-22-201ENST00000364456 82 ntBASIC0.13□□□□□ -2.39
XPAP23025 AC023932.2-201ENST00000603176 175 ntBASIC0.13□□□□□ -2.39
XPAP23025 RNU6-1241P-201ENST00000384536 107 ntBASIC0.12□□□□□ -2.39
XPAP23025 MIR6739-201ENST00000622461 75 ntBASIC0.12□□□□□ -2.39
XPAP23025 Y_RNA.250-201ENST00000364542 110 ntBASIC0.11□□□□□ -2.39
XPAP23025 SNORA33.1-201ENST00000364957 130 ntBASIC0.11□□□□□ -2.39
XPAP23025 MIR892B-201ENST00000401279 77 ntBASIC0.11□□□□□ -2.39
XPAP23025 RNU6-982P-201ENST00000516216 102 ntBASIC0.11□□□□□ -2.39
XPAP23025 CR383656.4-201ENST00000546909 122 ntBASIC0.11□□□□□ -2.39
XPAP23025 SNORD45A-201ENST00000384512 84 ntBASIC0.1□□□□□ -2.39
XPAP23025 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
XPAP23025 RNU6-687P-201ENST00000516443 89 ntBASIC0.1□□□□□ -2.39
XPAP23025 AC090617.8-201ENST00000623339 167 ntBASIC0.1□□□□□ -2.39
XPAP23025 RNU6-587P-201ENST00000391282 106 ntBASIC0.09□□□□□ -2.4
XPAP23025 MIR1197-201ENST00000408818 88 ntBASIC0.09□□□□□ -2.4
XPAP23025 RNU6-523P-201ENST00000516304 54 ntBASIC0.09□□□□□ -2.4
XPAP23025 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.09□□□□□ -2.4
XPAP23025 RNA5SP330-201ENST00000517096 96 ntBASIC0.09□□□□□ -2.4
XPAP23025 RNU6-1015P-201ENST00000517121 99 ntBASIC0.09□□□□□ -2.4
XPAP23025 AP000676.1-201ENST00000533307 52 ntBASIC0.09□□□□□ -2.4
XPAP23025 RNA5SP98-201ENST00000363158 137 ntBASIC0.08□□□□□ -2.4
XPAP23025 SNORA15B-2-201ENST00000384058 135 ntBASIC0.08□□□□□ -2.4
XPAP23025 SNORA15B-1-201ENST00000384334 135 ntBASIC0.08□□□□□ -2.4
XPAP23025 RNU6-411P-201ENST00000384451 107 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 240.5 ms