Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RNU6-924P-201ENST00000362926 108 ntBASIC-1.35□□□□□ -2.63
USF1P22415 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.35□□□□□ -2.63
USF1P22415 SNORA2.1-201ENST00000363089 137 ntBASIC-1.35□□□□□ -2.63
USF1P22415 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.35□□□□□ -2.63
USF1P22415 SNORD114-3-201ENST00000364969 75 ntBASIC-1.35□□□□□ -2.63
USF1P22415 RNU6-813P-201ENST00000384691 107 ntBASIC-1.35□□□□□ -2.63
USF1P22415 SNORA18.5-201ENST00000516616 101 ntBASIC-1.35□□□□□ -2.63
USF1P22415 CYP3A54P-201ENST00000566950 75 ntBASIC-1.35□□□□□ -2.63
USF1P22415 MIR4679-2-201ENST00000578358 77 ntBASIC-1.35□□□□□ -2.63
USF1P22415 MIR4770-201ENST00000579149 58 ntBASIC-1.35□□□□□ -2.63
USF1P22415 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.36□□□□□ -2.63
USF1P22415 SNORD116-18-201ENST00000383961 92 ntBASIC-1.36□□□□□ -2.63
USF1P22415 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.36□□□□□ -2.63
USF1P22415 MIR203A-201ENST00000384836 110 ntBASIC-1.36□□□□□ -2.63
USF1P22415 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.36□□□□□ -2.63
USF1P22415 RNU6-327P-201ENST00000516270 127 ntBASIC-1.36□□□□□ -2.63
USF1P22415 MIR548Z-201ENST00000584743 97 ntBASIC-1.36□□□□□ -2.63
USF1P22415 MIR3657-201ENST00000584818 117 ntBASIC-1.36□□□□□ -2.63
USF1P22415 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.36□□□□□ -2.63
USF1P22415 AC091912.2-201ENST00000624798 167 ntBASIC-1.36□□□□□ -2.63
USF1P22415 RNU6-576P-201ENST00000390854 102 ntBASIC-1.37□□□□□ -2.63
USF1P22415 MIR4503-201ENST00000582187 83 ntBASIC-1.37□□□□□ -2.63
USF1P22415 MIR6874-201ENST00000635894 71 ntBASIC-1.37□□□□□ -2.63
USF1P22415 RNA5SP26-201ENST00000362406 119 ntBASIC-1.38□□□□□ -2.63
USF1P22415 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.38□□□□□ -2.63
USF1P22415 SNORD115-22-201ENST00000364456 82 ntBASIC-1.38□□□□□ -2.63
USF1P22415 SNORD45B-201ENST00000364617 72 ntBASIC-1.38□□□□□ -2.63
USF1P22415 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.38□□□□□ -2.63
USF1P22415 RNU6-196P-201ENST00000384315 107 ntBASIC-1.38□□□□□ -2.63
USF1P22415 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.38□□□□□ -2.63
USF1P22415 MIR1207-201ENST00000408249 87 ntBASIC-1.38□□□□□ -2.63
USF1P22415 MIR548I1-201ENST00000408810 149 ntBASIC-1.38□□□□□ -2.63
USF1P22415 MTATP6P29-201ENST00000415057 132 ntBASIC-1.38□□□□□ -2.63
USF1P22415 RNU6-412P-201ENST00000516434 106 ntBASIC-1.38□□□□□ -2.63
USF1P22415 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.38□□□□□ -2.63
USF1P22415 MIR6509-201ENST00000614603 85 ntBASIC-1.38□□□□□ -2.63
USF1P22415 MIR4773-1-201ENST00000637203 78 ntBASIC-1.38□□□□□ -2.63
USF1P22415 RNU6-519P-201ENST00000410590 108 ntBASIC-1.39□□□□□ -2.63
USF1P22415 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.39□□□□□ -2.63
USF1P22415 RNU7-154P-201ENST00000516194 62 ntBASIC-1.39□□□□□ -2.63
USF1P22415 MIR569-201ENST00000385228 96 ntBASIC-1.4□□□□□ -2.63
USF1P22415 RNU6-394P-201ENST00000410735 107 ntBASIC-1.4□□□□□ -2.63
USF1P22415 MIR4777-201ENST00000583710 86 ntBASIC-1.4□□□□□ -2.63
USF1P22415 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.4□□□□□ -2.63
USF1P22415 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.41□□□□□ -2.64
USF1P22415 RNU6-200P-201ENST00000364743 107 ntBASIC-1.41□□□□□ -2.64
USF1P22415 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.41□□□□□ -2.64
USF1P22415 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.41□□□□□ -2.64
USF1P22415 RNU4-61P-201ENST00000411243 107 ntBASIC-1.41□□□□□ -2.64
USF1P22415 MTND3P2-201ENST00000438452 342 ntBASIC-1.41□□□□□ -2.64
USF1P22415 MIR1246-201ENST00000636535 73 ntBASIC-1.41□□□□□ -2.64
USF1P22415 RNU5F-1-201ENST00000362507 117 ntBASIC-1.42□□□□□ -2.64
USF1P22415 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.42□□□□□ -2.64
USF1P22415 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.42□□□□□ -2.64
USF1P22415 MIR521-2-201ENST00000384818 87 ntBASIC-1.42□□□□□ -2.64
USF1P22415 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.42□□□□□ -2.64
USF1P22415 U6.81-201ENST00000612550 106 ntBASIC-1.42□□□□□ -2.64
USF1P22415 RNU6-540P-201ENST00000384622 101 ntBASIC-1.43□□□□□ -2.64
USF1P22415 MIR519A2-201ENST00000384990 87 ntBASIC-1.43□□□□□ -2.64
USF1P22415 RNA5SP86-201ENST00000390869 98 ntBASIC-1.43□□□□□ -2.64
USF1P22415 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.43□□□□□ -2.64
USF1P22415 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.44□□□□□ -2.64
USF1P22415 AL691482.2-201ENST00000457453 84 ntBASIC-1.44□□□□□ -2.64
USF1P22415 RNU6-772P-201ENST00000516042 105 ntBASIC-1.44□□□□□ -2.64
USF1P22415 MIR5009-201ENST00000578736 100 ntBASIC-1.44□□□□□ -2.64
USF1P22415 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.45□□□□□ -2.64
USF1P22415 AL353691.2-201ENST00000443795 59 ntBASIC-1.45□□□□□ -2.64
USF1P22415 MIR6739-201ENST00000622461 75 ntBASIC-1.45□□□□□ -2.64
USF1P22415 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.46□□□□□ -2.64
USF1P22415 RNA5SP272-201ENST00000516095 111 ntBASIC-1.46□□□□□ -2.64
USF1P22415 RNU6-795P-201ENST00000516323 103 ntBASIC-1.46□□□□□ -2.64
USF1P22415 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.46□□□□□ -2.64
USF1P22415 AC012531.4-201ENST00000616509 177 ntBASIC-1.46□□□□□ -2.64
USF1P22415 RNU6-164P-201ENST00000364604 103 ntBASIC-1.47□□□□□ -2.64
USF1P22415 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.47□□□□□ -2.64
USF1P22415 RNU6-804P-201ENST00000384286 107 ntBASIC-1.47□□□□□ -2.64
USF1P22415 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.47□□□□□ -2.64
USF1P22415 RNU6-518P-201ENST00000516056 96 ntBASIC-1.47□□□□□ -2.64
USF1P22415 AC004792.1-201ENST00000614523 137 ntBASIC-1.47□□□□□ -2.64
USF1P22415 AL157777.2-201ENST00000258070 137 ntBASIC-1.48□□□□□ -2.65
USF1P22415 RNY4P27-201ENST00000363341 96 ntBASIC-1.48□□□□□ -2.65
USF1P22415 RNU6-704P-201ENST00000364162 103 ntBASIC-1.48□□□□□ -2.65
USF1P22415 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.48□□□□□ -2.65
USF1P22415 RNU6-80P-201ENST00000384195 107 ntBASIC-1.48□□□□□ -2.65
USF1P22415 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.48□□□□□ -2.65
USF1P22415 RNU6-732P-201ENST00000516033 103 ntBASIC-1.48□□□□□ -2.65
USF1P22415 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.48□□□□□ -2.65
USF1P22415 MIR3144-201ENST00000579460 79 ntBASIC-1.48□□□□□ -2.65
USF1P22415 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.49□□□□□ -2.65
USF1P22415 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.49□□□□□ -2.65
USF1P22415 RNU6-574P-201ENST00000384265 107 ntBASIC-1.49□□□□□ -2.65
USF1P22415 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.49□□□□□ -2.65
USF1P22415 MIR548H1-201ENST00000408610 102 ntBASIC-1.49□□□□□ -2.65
USF1P22415 AP002795.1-201ENST00000534879 84 ntBASIC-1.49□□□□□ -2.65
USF1P22415 MIR548AG1-201ENST00000579932 66 ntBASIC-1.49□□□□□ -2.65
USF1P22415 SNORD58A-201ENST00000383875 65 ntBASIC-1.5□□□□□ -2.65
USF1P22415 MIR487B-201ENST00000385021 84 ntBASIC-1.5□□□□□ -2.65
USF1P22415 MIR507-201ENST00000385234 94 ntBASIC-1.5□□□□□ -2.65
USF1P22415 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.5□□□□□ -2.65
USF1P22415 SNORA19.1-201ENST00000410656 129 ntBASIC-1.5□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms