Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MIR4773-1-201ENST00000637203 78 ntBASIC-0.78□□□□□ -2.53
ERCC2P18074 RNU6-824P-201ENST00000363724 104 ntBASIC-0.79□□□□□ -2.54
ERCC2P18074 RNA5SP368-201ENST00000364298 116 ntBASIC-0.79□□□□□ -2.54
ERCC2P18074 SNORA3B-201ENST00000391305 131 ntBASIC-0.79□□□□□ -2.54
ERCC2P18074 SNORD75.1-201ENST00000408373 60 ntBASIC-0.79□□□□□ -2.54
ERCC2P18074 snoR1.1-201ENST00000628177 80 ntBASIC-0.79□□□□□ -2.54
ERCC2P18074 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.79□□□□□ -2.54
ERCC2P18074 RNU6-766P-201ENST00000362478 107 ntBASIC-0.8□□□□□ -2.54
ERCC2P18074 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.8□□□□□ -2.54
ERCC2P18074 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.8□□□□□ -2.54
ERCC2P18074 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.8□□□□□ -2.54
ERCC2P18074 RNU6-337P-201ENST00000391243 106 ntBASIC-0.8□□□□□ -2.54
ERCC2P18074 MIR1236-201ENST00000408340 102 ntBASIC-0.8□□□□□ -2.54
ERCC2P18074 SNORD95.1-201ENST00000364099 68 ntBASIC-0.81□□□□□ -2.54
ERCC2P18074 MIR224-201ENST00000384889 81 ntBASIC-0.81□□□□□ -2.54
ERCC2P18074 MIRLET7B-201ENST00000385140 83 ntBASIC-0.81□□□□□ -2.54
ERCC2P18074 RNU6-313P-201ENST00000516317 112 ntBASIC-0.82□□□□□ -2.54
ERCC2P18074 RNU6-479P-201ENST00000516348 105 ntBASIC-0.82□□□□□ -2.54
ERCC2P18074 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.82□□□□□ -2.54
ERCC2P18074 U6.96-201ENST00000636425 70 ntBASIC-0.82□□□□□ -2.54
ERCC2P18074 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.83□□□□□ -2.54
ERCC2P18074 RNU6-260P-201ENST00000384092 107 ntBASIC-0.83□□□□□ -2.54
ERCC2P18074 AC021146.6-201ENST00000514659 117 ntBASIC-0.83□□□□□ -2.54
ERCC2P18074 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.83□□□□□ -2.54
ERCC2P18074 MIR3910-1-201ENST00000580936 111 ntBASIC-0.83□□□□□ -2.54
ERCC2P18074 MIR6854-201ENST00000614935 69 ntBASIC-0.83□□□□□ -2.54
ERCC2P18074 AC132825.6-201ENST00000638861 357 ntBASIC-0.83□□□□□ -2.54
ERCC2P18074 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.84□□□□□ -2.54
ERCC2P18074 MIR203A-201ENST00000384836 110 ntBASIC-0.84□□□□□ -2.54
ERCC2P18074 SNORA13-201ENST00000458790 133 ntBASIC-0.84□□□□□ -2.54
ERCC2P18074 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.84□□□□□ -2.54
ERCC2P18074 MIR6509-201ENST00000614603 85 ntBASIC-0.84□□□□□ -2.54
ERCC2P18074 RNU6-592P-201ENST00000411333 103 ntBASIC-0.85□□□□□ -2.55
ERCC2P18074 RNU7-153P-201ENST00000516455 62 ntBASIC-0.85□□□□□ -2.55
ERCC2P18074 RNA5SP476-201ENST00000516613 103 ntBASIC-0.85□□□□□ -2.55
ERCC2P18074 MIR8068-201ENST00000618032 68 ntBASIC-0.85□□□□□ -2.55
ERCC2P18074 SNORD115-23-201ENST00000364461 82 ntBASIC-0.86□□□□□ -2.55
ERCC2P18074 MIR518B-201ENST00000385127 83 ntBASIC-0.86□□□□□ -2.55
ERCC2P18074 MTATP8P2-201ENST00000435212 202 ntBASIC-0.86□□□□□ -2.55
ERCC2P18074 AL691482.2-201ENST00000457453 84 ntBASIC-0.86□□□□□ -2.55
ERCC2P18074 RNU6-274P-201ENST00000459566 107 ntBASIC-0.86□□□□□ -2.55
ERCC2P18074 RNA5SP147-201ENST00000516493 109 ntBASIC-0.86□□□□□ -2.55
ERCC2P18074 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.87□□□□□ -2.55
ERCC2P18074 AL031737.1-201ENST00000450125 223 ntBASIC-0.87□□□□□ -2.55
ERCC2P18074 U6.81-201ENST00000612550 106 ntBASIC-0.87□□□□□ -2.55
ERCC2P18074 RNU6-158P-201ENST00000517104 100 ntBASIC-0.88□□□□□ -2.55
ERCC2P18074 MIR3179-1-201ENST00000578940 84 ntBASIC-0.88□□□□□ -2.55
ERCC2P18074 MIR3179-2-201ENST00000579107 84 ntBASIC-0.88□□□□□ -2.55
ERCC2P18074 MIR3179-3-201ENST00000579566 84 ntBASIC-0.88□□□□□ -2.55
ERCC2P18074 MIR3657-201ENST00000584818 117 ntBASIC-0.88□□□□□ -2.55
ERCC2P18074 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.88□□□□□ -2.55
ERCC2P18074 MIR3179-4-201ENST00000617599 84 ntBASIC-0.88□□□□□ -2.55
ERCC2P18074 SNORD115-27-201ENST00000364430 82 ntBASIC-0.89□□□□□ -2.55
ERCC2P18074 SNORD22.1-201ENST00000516331 125 ntBASIC-0.89□□□□□ -2.55
ERCC2P18074 AC090617.8-201ENST00000623339 167 ntBASIC-0.89□□□□□ -2.55
ERCC2P18074 MIR450A1-201ENST00000362262 91 ntBASIC-0.9□□□□□ -2.55
ERCC2P18074 SNORA2.1-201ENST00000363089 137 ntBASIC-0.9□□□□□ -2.55
ERCC2P18074 SNORD114-15-201ENST00000364687 72 ntBASIC-0.9□□□□□ -2.55
ERCC2P18074 RNU2-51P-201ENST00000410708 197 ntBASIC-0.9□□□□□ -2.55
ERCC2P18074 AL450471.1-201ENST00000447509 127 ntBASIC-0.9□□□□□ -2.55
ERCC2P18074 MIR2052-201ENST00000636055 55 ntBASIC-0.9□□□□□ -2.55
ERCC2P18074 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.91□□□□□ -2.56
ERCC2P18074 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.91□□□□□ -2.56
ERCC2P18074 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.91□□□□□ -2.56
ERCC2P18074 MIR519C-201ENST00000385053 87 ntBASIC-0.91□□□□□ -2.56
ERCC2P18074 YWHAEP3-201ENST00000582767 121 ntBASIC-0.91□□□□□ -2.56
ERCC2P18074 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.92□□□□□ -2.56
ERCC2P18074 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.92□□□□□ -2.56
ERCC2P18074 RNU6-721P-201ENST00000410155 105 ntBASIC-0.92□□□□□ -2.56
ERCC2P18074 SNORA33.1-201ENST00000364957 130 ntBASIC-0.93□□□□□ -2.56
ERCC2P18074 RNY4P18-201ENST00000391107 89 ntBASIC-0.93□□□□□ -2.56
ERCC2P18074 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.93□□□□□ -2.56
ERCC2P18074 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.93□□□□□ -2.56
ERCC2P18074 SNORD74.6-201ENST00000364796 70 ntBASIC-0.94□□□□□ -2.56
ERCC2P18074 RNU6-905P-201ENST00000384434 107 ntBASIC-0.94□□□□□ -2.56
ERCC2P18074 MT-TQ-201ENST00000387372 72 ntBASIC-0.94□□□□□ -2.56
ERCC2P18074 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.94□□□□□ -2.56
ERCC2P18074 HAR1A.1-201ENST00000459583 118 ntBASIC-0.94□□□□□ -2.56
ERCC2P18074 RNU6-208P-201ENST00000362431 107 ntBASIC-0.95□□□□□ -2.56
ERCC2P18074 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.95□□□□□ -2.56
ERCC2P18074 SNORA62.4-201ENST00000365504 151 ntBASIC-0.95□□□□□ -2.56
ERCC2P18074 snoU13.19-201ENST00000459148 104 ntBASIC-0.95□□□□□ -2.56
ERCC2P18074 AC022137.1-201ENST00000483735 151 ntBASIC-0.95□□□□□ -2.56
ERCC2P18074 RNU6-881P-201ENST00000516813 102 ntBASIC-0.95□□□□□ -2.56
ERCC2P18074 MIR3681-201ENST00000580089 72 ntBASIC-0.95□□□□□ -2.56
ERCC2P18074 SNORD113-1-201ENST00000365321 69 ntBASIC-0.96□□□□□ -2.56
ERCC2P18074 AP000533.3-201ENST00000447704 118 ntBASIC-0.96□□□□□ -2.56
ERCC2P18074 MIR4668-201ENST00000582284 70 ntBASIC-0.96□□□□□ -2.56
ERCC2P18074 MIR196A1-201ENST00000388006 70 ntBASIC-0.97□□□□□ -2.56
ERCC2P18074 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
ERCC2P18074 RNU6-752P-201ENST00000516376 102 ntBASIC-0.97□□□□□ -2.56
ERCC2P18074 AL353803.5-201ENST00000599815 141 ntBASIC-0.97□□□□□ -2.56
ERCC2P18074 RNU6-633P-201ENST00000362612 103 ntBASIC-0.98□□□□□ -2.57
ERCC2P18074 SNORD115-37-201ENST00000363768 82 ntBASIC-0.98□□□□□ -2.57
ERCC2P18074 RNU6-340P-201ENST00000364005 107 ntBASIC-0.98□□□□□ -2.57
ERCC2P18074 MIR517B-201ENST00000385102 67 ntBASIC-0.98□□□□□ -2.57
ERCC2P18074 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
ERCC2P18074 SNORD77.2-201ENST00000391045 68 ntBASIC-0.98□□□□□ -2.57
ERCC2P18074 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.98□□□□□ -2.57
ERCC2P18074 AP001318.4-201ENST00000616637 121 ntBASIC-0.98□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 253.8 ms