Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 U6.81-201ENST00000612550 106 ntBASIC-0.29□□□□□ -2.46
PCNAP12004 RNA5SP257-201ENST00000363023 116 ntBASIC-0.3□□□□□ -2.46
PCNAP12004 SNORA63.6-201ENST00000364921 119 ntBASIC-0.3□□□□□ -2.46
PCNAP12004 RNU6-497P-201ENST00000365316 104 ntBASIC-0.3□□□□□ -2.46
PCNAP12004 SNORD4A-201ENST00000459174 72 ntBASIC-0.3□□□□□ -2.46
PCNAP12004 SNORA40.17-201ENST00000517256 115 ntBASIC-0.3□□□□□ -2.46
PCNAP12004 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.31□□□□□ -2.46
PCNAP12004 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.31□□□□□ -2.46
PCNAP12004 MIR329-2-201ENST00000385029 84 ntBASIC-0.31□□□□□ -2.46
PCNAP12004 MIR214-201ENST00000385214 110 ntBASIC-0.31□□□□□ -2.46
PCNAP12004 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.31□□□□□ -2.46
PCNAP12004 MIR9-2-201ENST00000384838 87 ntBASIC-0.32□□□□□ -2.46
PCNAP12004 SNORD77.2-201ENST00000391045 68 ntBASIC-0.32□□□□□ -2.46
PCNAP12004 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.32□□□□□ -2.46
PCNAP12004 RNU6-274P-201ENST00000459566 107 ntBASIC-0.32□□□□□ -2.46
PCNAP12004 AC021146.9-201ENST00000512503 156 ntBASIC-0.32□□□□□ -2.46
PCNAP12004 RNA5SP147-201ENST00000516493 109 ntBASIC-0.32□□□□□ -2.46
PCNAP12004 MIR6509-201ENST00000614603 85 ntBASIC-0.32□□□□□ -2.46
PCNAP12004 AL691482.2-201ENST00000457453 84 ntBASIC-0.33□□□□□ -2.46
PCNAP12004 RNA5SP285-201ENST00000516619 119 ntBASIC-0.33□□□□□ -2.46
PCNAP12004 SNORD114-31-201ENST00000363219 75 ntBASIC-0.34□□□□□ -2.46
PCNAP12004 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.34□□□□□ -2.46
PCNAP12004 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.34□□□□□ -2.46
PCNAP12004 RNU6-675P-201ENST00000384236 104 ntBASIC-0.34□□□□□ -2.46
PCNAP12004 AC140658.3-201ENST00000567603 271 ntBASIC-0.34□□□□□ -2.46
PCNAP12004 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.35□□□□□ -2.47
PCNAP12004 RNU6-260P-201ENST00000384092 107 ntBASIC-0.35□□□□□ -2.47
PCNAP12004 SNORD2-201ENST00000459163 69 ntBASIC-0.35□□□□□ -2.47
PCNAP12004 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.35□□□□□ -2.47
PCNAP12004 RNU6-340P-201ENST00000364005 107 ntBASIC-0.36□□□□□ -2.47
PCNAP12004 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.36□□□□□ -2.47
PCNAP12004 MIR3657-201ENST00000584818 117 ntBASIC-0.36□□□□□ -2.47
PCNAP12004 MIR3666-201ENST00000607845 111 ntBASIC-0.36□□□□□ -2.47
PCNAP12004 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.37□□□□□ -2.47
PCNAP12004 RNU6-502P-201ENST00000362419 108 ntBASIC-0.37□□□□□ -2.47
PCNAP12004 RNU6-624P-201ENST00000363411 107 ntBASIC-0.37□□□□□ -2.47
PCNAP12004 RNU6-592P-201ENST00000411333 103 ntBASIC-0.37□□□□□ -2.47
PCNAP12004 uc_338.36-201ENST00000622331 158 ntBASIC-0.37□□□□□ -2.47
PCNAP12004 RNU6-900P-201ENST00000384498 102 ntBASIC-0.38□□□□□ -2.47
PCNAP12004 AL590491.3-201ENST00000610731 82 ntBASIC-0.38□□□□□ -2.47
PCNAP12004 AL445193.1-201ENST00000441183 141 ntBASIC-0.39□□□□□ -2.47
PCNAP12004 IGLVI-20-201ENST00000519296 130 ntBASIC-0.39□□□□□ -2.47
PCNAP12004 MIR4263-201ENST00000584745 83 ntBASIC-0.39□□□□□ -2.47
PCNAP12004 MIR6773-201ENST00000612812 74 ntBASIC-0.39□□□□□ -2.47
PCNAP12004 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.39□□□□□ -2.47
PCNAP12004 MIR4788-201ENST00000639104 80 ntBASIC-0.39□□□□□ -2.47
PCNAP12004 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.4□□□□□ -2.47
PCNAP12004 SNORD56B-201ENST00000384713 71 ntBASIC-0.4□□□□□ -2.47
PCNAP12004 RNA5SP300-201ENST00000391197 107 ntBASIC-0.4□□□□□ -2.47
PCNAP12004 RNU6-337P-201ENST00000391243 106 ntBASIC-0.4□□□□□ -2.47
PCNAP12004 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
PCNAP12004 IGLL4P-201ENST00000614590 133 ntBASIC-0.4□□□□□ -2.47
PCNAP12004 AC006160.2-201ENST00000637708 154 ntBASIC-0.4□□□□□ -2.47
PCNAP12004 RNU7-55P-201ENST00000459426 62 ntBASIC-0.41□□□□□ -2.48
PCNAP12004 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.41□□□□□ -2.48
PCNAP12004 YWHAEP3-201ENST00000582767 121 ntBASIC-0.41□□□□□ -2.48
PCNAP12004 SNORA2.1-201ENST00000363089 137 ntBASIC-0.42□□□□□ -2.48
PCNAP12004 RNY1P1-201ENST00000364372 112 ntBASIC-0.42□□□□□ -2.48
PCNAP12004 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.42□□□□□ -2.48
PCNAP12004 RNU6-901P-201ENST00000384593 106 ntBASIC-0.42□□□□□ -2.48
PCNAP12004 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.42□□□□□ -2.48
PCNAP12004 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.42□□□□□ -2.48
PCNAP12004 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.42□□□□□ -2.48
PCNAP12004 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.42□□□□□ -2.48
PCNAP12004 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.42□□□□□ -2.48
PCNAP12004 AC090617.8-201ENST00000623339 167 ntBASIC-0.42□□□□□ -2.48
PCNAP12004 U6.96-201ENST00000636425 70 ntBASIC-0.42□□□□□ -2.48
PCNAP12004 SNORD114-11-201ENST00000363738 75 ntBASIC-0.43□□□□□ -2.48
PCNAP12004 RNU6-478P-201ENST00000363904 110 ntBASIC-0.43□□□□□ -2.48
PCNAP12004 MIR5582-201ENST00000579697 68 ntBASIC-0.43□□□□□ -2.48
PCNAP12004 MIR6759-201ENST00000638110 65 ntBASIC-0.43□□□□□ -2.48
PCNAP12004 RNU6-681P-201ENST00000364012 104 ntBASIC-0.44□□□□□ -2.48
PCNAP12004 SNORA33.1-201ENST00000364957 130 ntBASIC-0.45□□□□□ -2.48
PCNAP12004 RNU6-294P-201ENST00000364999 102 ntBASIC-0.45□□□□□ -2.48
PCNAP12004 MIRLET7B-201ENST00000385140 83 ntBASIC-0.45□□□□□ -2.48
PCNAP12004 RNU6-752P-201ENST00000516376 102 ntBASIC-0.45□□□□□ -2.48
PCNAP12004 RNU6-557P-201ENST00000516842 110 ntBASIC-0.45□□□□□ -2.48
PCNAP12004 RNA5SP66-201ENST00000517178 101 ntBASIC-0.45□□□□□ -2.48
PCNAP12004 MIR5588-201ENST00000581890 63 ntBASIC-0.45□□□□□ -2.48
PCNAP12004 MIR494-201ENST00000349529 81 ntBASIC-0.46□□□□□ -2.48
PCNAP12004 SNORD114-28-201ENST00000363610 72 ntBASIC-0.46□□□□□ -2.48
PCNAP12004 RNU6-129P-201ENST00000391022 107 ntBASIC-0.46□□□□□ -2.48
PCNAP12004 MIR4645-201ENST00000583158 77 ntBASIC-0.46□□□□□ -2.48
PCNAP12004 AL391099.1-201ENST00000624635 187 ntBASIC-0.46□□□□□ -2.48
PCNAP12004 MIR4802-201ENST00000581881 80 ntBASIC-0.47□□□□□ -2.48
PCNAP12004 MIR5704-201ENST00000584029 77 ntBASIC-0.47□□□□□ -2.48
PCNAP12004 RNU6-330P-201ENST00000363015 107 ntBASIC-0.48□□□□□ -2.49
PCNAP12004 RNU6-973P-201ENST00000364690 107 ntBASIC-0.48□□□□□ -2.49
PCNAP12004 RNU6-686P-201ENST00000364839 107 ntBASIC-0.48□□□□□ -2.49
PCNAP12004 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.48□□□□□ -2.49
PCNAP12004 RNU6-320P-201ENST00000516511 106 ntBASIC-0.48□□□□□ -2.49
PCNAP12004 MIR8064-201ENST00000612863 90 ntBASIC-0.48□□□□□ -2.49
PCNAP12004 RNU6-979P-201ENST00000383896 107 ntBASIC-0.49□□□□□ -2.49
PCNAP12004 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.49□□□□□ -2.49
PCNAP12004 AC022137.1-201ENST00000483735 151 ntBASIC-0.49□□□□□ -2.49
PCNAP12004 MIR5589-201ENST00000579442 60 ntBASIC-0.49□□□□□ -2.49
PCNAP12004 MIR4280-201ENST00000582178 76 ntBASIC-0.49□□□□□ -2.49
PCNAP12004 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.5□□□□□ -2.49
PCNAP12004 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.5□□□□□ -2.49
PCNAP12004 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 315.1 ms