Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.44□□□□□ -2.34
SPDEFO95238 RNU6-663P-201ENST00000391105 106 ntBASIC0.43□□□□□ -2.34
SPDEFO95238 snoU13.13-201ENST00000458842 104 ntBASIC0.43□□□□□ -2.34
SPDEFO95238 Y_RNA.633-201ENST00000459107 95 ntBASIC0.43□□□□□ -2.34
SPDEFO95238 RPS29P1-201ENST00000465274 159 ntBASIC0.43□□□□□ -2.34
SPDEFO95238 RNU7-129P-201ENST00000516128 62 ntBASIC0.43□□□□□ -2.34
SPDEFO95238 MIR499B-201ENST00000636498 73 ntBASIC0.43□□□□□ -2.34
SPDEFO95238 RNU6-645P-201ENST00000364649 106 ntBASIC0.42□□□□□ -2.34
SPDEFO95238 RNU6-649P-201ENST00000384463 107 ntBASIC0.42□□□□□ -2.34
SPDEFO95238 MIR499A-201ENST00000384903 122 ntBASIC0.42□□□□□ -2.34
SPDEFO95238 MIR216A-201ENST00000385063 110 ntBASIC0.42□□□□□ -2.34
SPDEFO95238 SNORD30.1-201ENST00000391309 70 ntBASIC0.42□□□□□ -2.34
SPDEFO95238 RNU6-539P-201ENST00000516665 103 ntBASIC0.42□□□□□ -2.34
SPDEFO95238 RNU7-188P-201ENST00000517063 64 ntBASIC0.42□□□□□ -2.34
SPDEFO95238 MIR4714-201ENST00000580728 77 ntBASIC0.42□□□□□ -2.34
SPDEFO95238 SNORA9.1-201ENST00000362412 131 ntBASIC0.41□□□□□ -2.34
SPDEFO95238 RNU6-1216P-201ENST00000362590 107 ntBASIC0.41□□□□□ -2.34
SPDEFO95238 AC084368.1-201ENST00000620935 65 ntBASIC0.41□□□□□ -2.34
SPDEFO95238 RNA5SP347-201ENST00000362445 119 ntBASIC0.4□□□□□ -2.35
SPDEFO95238 SNORA15B-2-201ENST00000384058 135 ntBASIC0.4□□□□□ -2.35
SPDEFO95238 SNORA15B-1-201ENST00000384334 135 ntBASIC0.4□□□□□ -2.35
SPDEFO95238 RNU6-1162P-201ENST00000384443 104 ntBASIC0.4□□□□□ -2.35
SPDEFO95238 SNORD116-24-201ENST00000384549 92 ntBASIC0.4□□□□□ -2.35
SPDEFO95238 MIR521-2-201ENST00000384818 87 ntBASIC0.4□□□□□ -2.35
SPDEFO95238 AC139453.2-201ENST00000487255 133 ntBASIC0.4□□□□□ -2.35
SPDEFO95238 RNU6-656P-201ENST00000516785 107 ntBASIC0.4□□□□□ -2.35
SPDEFO95238 MIR3925-201ENST00000584674 77 ntBASIC0.4□□□□□ -2.35
SPDEFO95238 Y_RNA.164-201ENST00000363709 102 ntBASIC0.39□□□□□ -2.35
SPDEFO95238 RNU6-815P-201ENST00000384080 113 ntBASIC0.39□□□□□ -2.35
SPDEFO95238 MIR876-201ENST00000401147 81 ntBASIC0.39□□□□□ -2.35
SPDEFO95238 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.39□□□□□ -2.35
SPDEFO95238 MIR548J-201ENST00000408833 112 ntBASIC0.39□□□□□ -2.35
SPDEFO95238 MTND4LP1-201ENST00000446263 157 ntBASIC0.39□□□□□ -2.35
SPDEFO95238 RNU6-175P-201ENST00000516896 107 ntBASIC0.39□□□□□ -2.35
SPDEFO95238 MIR5000-201ENST00000577717 103 ntBASIC0.39□□□□□ -2.35
SPDEFO95238 RNA5SP62-201ENST00000363457 110 ntBASIC0.38□□□□□ -2.35
SPDEFO95238 SNORD2-201ENST00000459163 69 ntBASIC0.38□□□□□ -2.35
SPDEFO95238 U6.111-201ENST00000636093 83 ntBASIC0.38□□□□□ -2.35
SPDEFO95238 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
SPDEFO95238 RNU6-127P-201ENST00000390897 107 ntBASIC0.37□□□□□ -2.35
SPDEFO95238 AC114737.2-201ENST00000421583 173 ntBASIC0.37□□□□□ -2.35
SPDEFO95238 RNU6-668P-201ENST00000364180 107 ntBASIC0.36□□□□□ -2.35
SPDEFO95238 SNORA33.1-201ENST00000364957 130 ntBASIC0.36□□□□□ -2.35
SPDEFO95238 RNU6-1327P-201ENST00000365302 105 ntBASIC0.36□□□□□ -2.35
SPDEFO95238 SNORA75.1-201ENST00000391130 148 ntBASIC0.36□□□□□ -2.35
SPDEFO95238 AC069113.3-201ENST00000521019 150 ntBASIC0.36□□□□□ -2.35
SPDEFO95238 Y_RNA.224-201ENST00000364308 111 ntBASIC0.35□□□□□ -2.35
SPDEFO95238 Y_RNA.443-201ENST00000384135 111 ntBASIC0.35□□□□□ -2.35
SPDEFO95238 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
SPDEFO95238 SNORA49-201ENST00000386157 136 ntBASIC0.35□□□□□ -2.35
SPDEFO95238 RNU6-782P-201ENST00000516852 104 ntBASIC0.35□□□□□ -2.35
SPDEFO95238 RNU6-1223P-201ENST00000517124 104 ntBASIC0.35□□□□□ -2.35
SPDEFO95238 SCARNA11.2-201ENST00000517183 154 ntBASIC0.35□□□□□ -2.35
SPDEFO95238 RN7SL660P-201ENST00000614852 299 ntBASIC0.35□□□□□ -2.35
SPDEFO95238 RNA5SP499-201ENST00000363982 119 ntBASIC0.34□□□□□ -2.36
SPDEFO95238 RNU6-630P-201ENST00000391258 106 ntBASIC0.34□□□□□ -2.36
SPDEFO95238 MIR5087-201ENST00000635826 76 ntBASIC0.34□□□□□ -2.36
SPDEFO95238 RNU6-590P-201ENST00000365039 107 ntBASIC0.33□□□□□ -2.36
SPDEFO95238 RNU6-800P-201ENST00000384473 103 ntBASIC0.33□□□□□ -2.36
SPDEFO95238 AC108740.1-201ENST00000498629 225 ntBASIC0.33□□□□□ -2.36
SPDEFO95238 Y_RNA.676-201ENST00000516393 96 ntBASIC0.33□□□□□ -2.36
SPDEFO95238 AC243829.6-201ENST00000612652 106 ntBASIC0.33□□□□□ -2.36
SPDEFO95238 SNORA25.4-201ENST00000363666 124 ntBASIC0.32□□□□□ -2.36
SPDEFO95238 RNU6-1036P-201ENST00000383959 104 ntBASIC0.32□□□□□ -2.36
SPDEFO95238 AC005520.4-201ENST00000604337 90 ntBASIC0.32□□□□□ -2.36
SPDEFO95238 MIR6513-201ENST00000621188 64 ntBASIC0.32□□□□□ -2.36
SPDEFO95238 U6.96-201ENST00000636425 70 ntBASIC0.32□□□□□ -2.36
SPDEFO95238 Y_RNA.386-201ENST00000383913 105 ntBASIC0.31□□□□□ -2.36
SPDEFO95238 MIR106A-201ENST00000384870 81 ntBASIC0.31□□□□□ -2.36
SPDEFO95238 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.31□□□□□ -2.36
SPDEFO95238 RNU6-1089P-201ENST00000516473 104 ntBASIC0.31□□□□□ -2.36
SPDEFO95238 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
SPDEFO95238 RNA5SP247-201ENST00000411181 105 ntBASIC0.3□□□□□ -2.36
SPDEFO95238 AL109933.3-201ENST00000619095 188 ntBASIC0.3□□□□□ -2.36
SPDEFO95238 AC243829.3-201ENST00000622177 108 ntBASIC0.3□□□□□ -2.36
SPDEFO95238 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
SPDEFO95238 Y_RNA.375-201ENST00000365625 101 ntBASIC0.29□□□□□ -2.36
SPDEFO95238 MIR643-201ENST00000385267 97 ntBASIC0.29□□□□□ -2.36
SPDEFO95238 RNA5SP220-201ENST00000516298 104 ntBASIC0.29□□□□□ -2.36
SPDEFO95238 MIR4315-1-201ENST00000636800 73 ntBASIC0.29□□□□□ -2.36
SPDEFO95238 MIR4315-2-201ENST00000640925 73 ntBASIC0.29□□□□□ -2.36
SPDEFO95238 RNA5SP215-201ENST00000363440 122 ntBASIC0.28□□□□□ -2.36
SPDEFO95238 MIR6773-201ENST00000612812 74 ntBASIC0.28□□□□□ -2.36
SPDEFO95238 U2.7-201ENST00000619197 100 ntBASIC0.28□□□□□ -2.36
SPDEFO95238 SNORD115-25-201ENST00000362619 82 ntBASIC0.27□□□□□ -2.37
SPDEFO95238 RNU6-337P-201ENST00000391243 106 ntBASIC0.27□□□□□ -2.37
SPDEFO95238 MIR548H2-201ENST00000408874 88 ntBASIC0.27□□□□□ -2.37
SPDEFO95238 CYP3A54P-201ENST00000566950 75 ntBASIC0.27□□□□□ -2.37
SPDEFO95238 AC090617.8-201ENST00000623339 167 ntBASIC0.27□□□□□ -2.37
SPDEFO95238 VTRNA1-3-201ENST00000365645 89 ntBASIC0.26□□□□□ -2.37
SPDEFO95238 RNU6-788P-201ENST00000390967 104 ntBASIC0.26□□□□□ -2.37
SPDEFO95238 MIR4711-201ENST00000578274 70 ntBASIC0.26□□□□□ -2.37
SPDEFO95238 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.26□□□□□ -2.37
SPDEFO95238 RNU6-502P-201ENST00000362419 108 ntBASIC0.25□□□□□ -2.37
SPDEFO95238 RNA5SP98-201ENST00000363158 137 ntBASIC0.25□□□□□ -2.37
SPDEFO95238 MIR548C-201ENST00000384815 97 ntBASIC0.25□□□□□ -2.37
SPDEFO95238 RNA5SP325-201ENST00000363756 130 ntBASIC0.24□□□□□ -2.37
SPDEFO95238 Y_RNA.226-201ENST00000364337 114 ntBASIC0.24□□□□□ -2.37
SPDEFO95238 MIR892B-201ENST00000401279 77 ntBASIC0.24□□□□□ -2.37
SPDEFO95238 MIR1287-201ENST00000408492 90 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 367.6 ms