Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.55□□□□□ -2.66
SHOX2O60902 RNY4P10-201ENST00000365571 96 ntBASIC-1.55□□□□□ -2.66
SHOX2O60902 MIR521-2-201ENST00000384818 87 ntBASIC-1.55□□□□□ -2.66
SHOX2O60902 MIR1302-6-201ENST00000408466 90 ntBASIC-1.55□□□□□ -2.66
SHOX2O60902 RNU2-38P-201ENST00000410856 79 ntBASIC-1.55□□□□□ -2.66
SHOX2O60902 RNU7-85P-201ENST00000458851 63 ntBASIC-1.55□□□□□ -2.66
SHOX2O60902 MIR4536-1-201ENST00000583537 88 ntBASIC-1.55□□□□□ -2.66
SHOX2O60902 AC025521.1-201ENST00000621624 286 ntBASIC-1.55□□□□□ -2.66
SHOX2O60902 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.55□□□□□ -2.66
SHOX2O60902 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.56□□□□□ -2.66
SHOX2O60902 RNU6-478P-201ENST00000363904 110 ntBASIC-1.56□□□□□ -2.66
SHOX2O60902 SNORD50.2-201ENST00000365465 70 ntBASIC-1.56□□□□□ -2.66
SHOX2O60902 RNU6-132P-201ENST00000383863 107 ntBASIC-1.56□□□□□ -2.66
SHOX2O60902 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.56□□□□□ -2.66
SHOX2O60902 MIR548D2-201ENST00000384955 97 ntBASIC-1.56□□□□□ -2.66
SHOX2O60902 RNU6-258P-201ENST00000390884 101 ntBASIC-1.56□□□□□ -2.66
SHOX2O60902 SNORA19.1-201ENST00000410656 129 ntBASIC-1.56□□□□□ -2.66
SHOX2O60902 SNORD127-201ENST00000458892 86 ntBASIC-1.56□□□□□ -2.66
SHOX2O60902 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.56□□□□□ -2.66
SHOX2O60902 RNU6-65P-201ENST00000516332 98 ntBASIC-1.56□□□□□ -2.66
SHOX2O60902 RNA5SP106-201ENST00000517274 100 ntBASIC-1.56□□□□□ -2.66
SHOX2O60902 AC134503.1-201ENST00000633048 54 ntBASIC-1.56□□□□□ -2.66
SHOX2O60902 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.57□□□□□ -2.66
SHOX2O60902 RNY4P9-201ENST00000363194 97 ntBASIC-1.57□□□□□ -2.66
SHOX2O60902 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.57□□□□□ -2.66
SHOX2O60902 RNU6-409P-201ENST00000384114 104 ntBASIC-1.57□□□□□ -2.66
SHOX2O60902 MIR520D-201ENST00000385002 87 ntBASIC-1.57□□□□□ -2.66
SHOX2O60902 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.57□□□□□ -2.66
SHOX2O60902 AC120024.2-201ENST00000576526 175 ntBASIC-1.57□□□□□ -2.66
SHOX2O60902 MIR5693-201ENST00000577722 73 ntBASIC-1.57□□□□□ -2.66
SHOX2O60902 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.57□□□□□ -2.66
SHOX2O60902 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.57□□□□□ -2.66
SHOX2O60902 MIR6739-201ENST00000622461 75 ntBASIC-1.57□□□□□ -2.66
SHOX2O60902 MTND4P29-201ENST00000503122 1372 ntBASIC-1.58□□□□□ -2.66
SHOX2O60902 RNU6-563P-201ENST00000364872 108 ntBASIC-1.58□□□□□ -2.66
SHOX2O60902 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.58□□□□□ -2.66
SHOX2O60902 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.58□□□□□ -2.66
SHOX2O60902 AL021921.1-201ENST00000442774 93 ntBASIC-1.58□□□□□ -2.66
SHOX2O60902 MIR3658-201ENST00000636291 56 ntBASIC-1.58□□□□□ -2.66
SHOX2O60902 MIR548P-201ENST00000408336 84 ntBASIC-1.59□□□□□ -2.66
SHOX2O60902 RNU6-985P-201ENST00000410182 104 ntBASIC-1.59□□□□□ -2.66
SHOX2O60902 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.6□□□□□ -2.67
SHOX2O60902 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.6□□□□□ -2.67
SHOX2O60902 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.6□□□□□ -2.67
SHOX2O60902 RNU6-918P-201ENST00000391219 106 ntBASIC-1.6□□□□□ -2.67
SHOX2O60902 MIR3121-201ENST00000579680 77 ntBASIC-1.6□□□□□ -2.67
SHOX2O60902 AL160413.1-201ENST00000622780 310 ntBASIC-1.6□□□□□ -2.67
SHOX2O60902 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.61□□□□□ -2.67
SHOX2O60902 RNU6-141P-201ENST00000410499 105 ntBASIC-1.61□□□□□ -2.67
SHOX2O60902 snoU13.10-201ENST00000459301 103 ntBASIC-1.61□□□□□ -2.67
SHOX2O60902 AC097484.2-201ENST00000509147 251 ntBASIC-1.61□□□□□ -2.67
SHOX2O60902 MIR3657-201ENST00000584818 117 ntBASIC-1.61□□□□□ -2.67
SHOX2O60902 MIR8062-201ENST00000621515 85 ntBASIC-1.61□□□□□ -2.67
SHOX2O60902 RNU6-766P-201ENST00000362478 107 ntBASIC-1.62□□□□□ -2.67
SHOX2O60902 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.62□□□□□ -2.67
SHOX2O60902 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.62□□□□□ -2.67
SHOX2O60902 RNU6-696P-201ENST00000390834 107 ntBASIC-1.62□□□□□ -2.67
SHOX2O60902 RNU6-630P-201ENST00000391258 106 ntBASIC-1.62□□□□□ -2.67
SHOX2O60902 RNU7-88P-201ENST00000458752 63 ntBASIC-1.62□□□□□ -2.67
SHOX2O60902 RNU6-518P-201ENST00000516056 96 ntBASIC-1.62□□□□□ -2.67
SHOX2O60902 RNU7-121P-201ENST00000516604 62 ntBASIC-1.62□□□□□ -2.67
SHOX2O60902 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.62□□□□□ -2.67
SHOX2O60902 MIR3064-201ENST00000581130 66 ntBASIC-1.62□□□□□ -2.67
SHOX2O60902 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.63□□□□□ -2.67
SHOX2O60902 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.63□□□□□ -2.67
SHOX2O60902 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.63□□□□□ -2.67
SHOX2O60902 AL035461.1-201ENST00000421490 332 ntBASIC-1.63□□□□□ -2.67
SHOX2O60902 AL513043.2-201ENST00000573941 143 ntBASIC-1.63□□□□□ -2.67
SHOX2O60902 RNU6-694P-201ENST00000364071 147 ntBASIC-1.64□□□□□ -2.67
SHOX2O60902 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.64□□□□□ -2.67
SHOX2O60902 RNA5SP136-201ENST00000410906 107 ntBASIC-1.64□□□□□ -2.67
SHOX2O60902 MTND2P23-201ENST00000422990 651 ntBASIC-1.64□□□□□ -2.67
SHOX2O60902 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.64□□□□□ -2.67
SHOX2O60902 AC006254.2-201ENST00000603259 279 ntBASIC-1.64□□□□□ -2.67
SHOX2O60902 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.65□□□□□ -2.67
SHOX2O60902 RNU6-382P-201ENST00000365181 106 ntBASIC-1.65□□□□□ -2.67
SHOX2O60902 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.65□□□□□ -2.67
SHOX2O60902 MIR548U-201ENST00000390728 81 ntBASIC-1.65□□□□□ -2.67
SHOX2O60902 RNU6-239P-201ENST00000390990 99 ntBASIC-1.65□□□□□ -2.67
SHOX2O60902 SNORD37.2-201ENST00000391075 66 ntBASIC-1.65□□□□□ -2.67
SHOX2O60902 SNORD58.1-201ENST00000391313 66 ntBASIC-1.65□□□□□ -2.67
SHOX2O60902 AC104996.3-201ENST00000590718 94 ntBASIC-1.65□□□□□ -2.67
SHOX2O60902 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.66□□□□□ -2.68
SHOX2O60902 RNU6-816P-201ENST00000390914 107 ntBASIC-1.66□□□□□ -2.68
SHOX2O60902 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.66□□□□□ -2.68
SHOX2O60902 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.66□□□□□ -2.68
SHOX2O60902 MIR548Q-201ENST00000408404 100 ntBASIC-1.66□□□□□ -2.68
SHOX2O60902 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.66□□□□□ -2.68
SHOX2O60902 RNA5SP147-201ENST00000516493 109 ntBASIC-1.66□□□□□ -2.68
SHOX2O60902 RNU6-62P-201ENST00000516526 102 ntBASIC-1.66□□□□□ -2.68
SHOX2O60902 RNU6-807P-201ENST00000516805 107 ntBASIC-1.66□□□□□ -2.68
SHOX2O60902 AC130289.1-201ENST00000577321 73 ntBASIC-1.66□□□□□ -2.68
SHOX2O60902 MIR548S-201ENST00000581352 82 ntBASIC-1.66□□□□□ -2.68
SHOX2O60902 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.66□□□□□ -2.68
SHOX2O60902 RNU6-682P-201ENST00000363843 106 ntBASIC-1.67□□□□□ -2.68
SHOX2O60902 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.67□□□□□ -2.68
SHOX2O60902 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.67□□□□□ -2.68
SHOX2O60902 SNORD90-201ENST00000391145 111 ntBASIC-1.67□□□□□ -2.68
SHOX2O60902 MIR1263-201ENST00000408324 86 ntBASIC-1.67□□□□□ -2.68
SHOX2O60902 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.68□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 421.3 ms