Protein–RNA interactions for Protein: O15270

SPTLC2, Serine palmitoyltransferase 2, humanhuman

Predictions only

Length 562 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2O15270 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
SPTLC2O15270 RNU7-24P-201ENST00000458867 62 ntBASIC0.31□□□□□ -2.36
SPTLC2O15270 SCARNA17.3-201ENST00000516381 125 ntBASIC0.31□□□□□ -2.36
SPTLC2O15270 RNU6-70P-201ENST00000516438 60 ntBASIC0.31□□□□□ -2.36
SPTLC2O15270 MIR3675-201ENST00000583661 73 ntBASIC0.31□□□□□ -2.36
SPTLC2O15270 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
SPTLC2O15270 SNORD114-26-201ENST00000363543 72 ntBASIC0.3□□□□□ -2.36
SPTLC2O15270 MIR582-201ENST00000365731 98 ntBASIC0.3□□□□□ -2.36
SPTLC2O15270 RNU6-127P-201ENST00000390897 107 ntBASIC0.3□□□□□ -2.36
SPTLC2O15270 AC074348.1-201ENST00000426503 132 ntBASIC0.3□□□□□ -2.36
SPTLC2O15270 MIR3134-201ENST00000579433 74 ntBASIC0.3□□□□□ -2.36
SPTLC2O15270 MIR3657-201ENST00000584818 117 ntBASIC0.3□□□□□ -2.36
SPTLC2O15270 AC010487.4-201ENST00000637027 61 ntBASIC0.3□□□□□ -2.36
SPTLC2O15270 SNORD45.1-201ENST00000363181 77 ntBASIC0.29□□□□□ -2.36
SPTLC2O15270 Y_RNA.205-201ENST00000364128 113 ntBASIC0.29□□□□□ -2.36
SPTLC2O15270 RNU6-260P-201ENST00000384092 107 ntBASIC0.29□□□□□ -2.36
SPTLC2O15270 MIR193B-201ENST00000384907 83 ntBASIC0.29□□□□□ -2.36
SPTLC2O15270 RNU6-604P-201ENST00000390917 100 ntBASIC0.29□□□□□ -2.36
SPTLC2O15270 RNU6-848P-201ENST00000515948 107 ntBASIC0.29□□□□□ -2.36
SPTLC2O15270 RNU6-617P-201ENST00000516147 107 ntBASIC0.29□□□□□ -2.36
SPTLC2O15270 RNU6-473P-201ENST00000516164 107 ntBASIC0.29□□□□□ -2.36
SPTLC2O15270 RNU6-1049P-201ENST00000516414 107 ntBASIC0.29□□□□□ -2.36
SPTLC2O15270 AC145423.2-201ENST00000610631 239 ntBASIC0.29□□□□□ -2.36
SPTLC2O15270 U7.4-201ENST00000614961 63 ntBASIC0.29□□□□□ -2.36
SPTLC2O15270 AC021146.9-201ENST00000512503 156 ntBASIC0.28□□□□□ -2.36
SPTLC2O15270 RNU6-752P-201ENST00000516376 102 ntBASIC0.28□□□□□ -2.36
SPTLC2O15270 Y_RNA.681-201ENST00000516445 113 ntBASIC0.28□□□□□ -2.36
SPTLC2O15270 RNU6-638P-201ENST00000516582 104 ntBASIC0.28□□□□□ -2.36
SPTLC2O15270 SCARNA11.2-201ENST00000517183 154 ntBASIC0.28□□□□□ -2.36
SPTLC2O15270 MIR3925-201ENST00000584674 77 ntBASIC0.28□□□□□ -2.36
SPTLC2O15270 MIR548AD-201ENST00000584780 82 ntBASIC0.28□□□□□ -2.36
SPTLC2O15270 MIR6779-201ENST00000617283 64 ntBASIC0.28□□□□□ -2.36
SPTLC2O15270 SNORD114-29-201ENST00000364819 70 ntBASIC0.27□□□□□ -2.37
SPTLC2O15270 MIR106A-201ENST00000384870 81 ntBASIC0.27□□□□□ -2.37
SPTLC2O15270 RNA5SP395-201ENST00000516567 118 ntBASIC0.27□□□□□ -2.37
SPTLC2O15270 AC069113.3-201ENST00000521019 150 ntBASIC0.27□□□□□ -2.37
SPTLC2O15270 RNA5SP325-201ENST00000363756 130 ntBASIC0.26□□□□□ -2.37
SPTLC2O15270 MIR548E-201ENST00000408287 88 ntBASIC0.26□□□□□ -2.37
SPTLC2O15270 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
SPTLC2O15270 MIR20A-201ENST00000362279 71 ntBASIC0.25□□□□□ -2.37
SPTLC2O15270 Y_RNA.545-201ENST00000384652 105 ntBASIC0.25□□□□□ -2.37
SPTLC2O15270 MIR7-2-201ENST00000384970 110 ntBASIC0.25□□□□□ -2.37
SPTLC2O15270 MIR154-201ENST00000385243 84 ntBASIC0.25□□□□□ -2.37
SPTLC2O15270 MIR4514-201ENST00000581410 57 ntBASIC0.25□□□□□ -2.37
SPTLC2O15270 SNORA63.6-201ENST00000364921 119 ntBASIC0.24□□□□□ -2.37
SPTLC2O15270 RNU6-1036P-201ENST00000383959 104 ntBASIC0.24□□□□□ -2.37
SPTLC2O15270 SNORD45A-201ENST00000384512 84 ntBASIC0.24□□□□□ -2.37
SPTLC2O15270 SNORA40.17-201ENST00000517256 115 ntBASIC0.24□□□□□ -2.37
SPTLC2O15270 MIR1273G-201ENST00000577677 100 ntBASIC0.24□□□□□ -2.37
SPTLC2O15270 RN7SL660P-201ENST00000614852 299 ntBASIC0.24□□□□□ -2.37
SPTLC2O15270 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.24□□□□□ -2.37
SPTLC2O15270 MIR4315-1-201ENST00000636800 73 ntBASIC0.24□□□□□ -2.37
SPTLC2O15270 MIR4662A-201ENST00000637499 67 ntBASIC0.24□□□□□ -2.37
SPTLC2O15270 MIR4315-2-201ENST00000640925 73 ntBASIC0.24□□□□□ -2.37
SPTLC2O15270 RNU6-776P-201ENST00000364403 104 ntBASIC0.23□□□□□ -2.37
SPTLC2O15270 RNU6-1022P-201ENST00000365049 104 ntBASIC0.23□□□□□ -2.37
SPTLC2O15270 RNU6-1241P-201ENST00000384536 107 ntBASIC0.23□□□□□ -2.37
SPTLC2O15270 Y_RNA.565-201ENST00000384719 101 ntBASIC0.23□□□□□ -2.37
SPTLC2O15270 MIR593-201ENST00000384856 100 ntBASIC0.23□□□□□ -2.37
SPTLC2O15270 SNORA2.1-201ENST00000363089 137 ntBASIC0.22□□□□□ -2.37
SPTLC2O15270 RNU6-411P-201ENST00000384451 107 ntBASIC0.22□□□□□ -2.37
SPTLC2O15270 SNORA75.1-201ENST00000391130 148 ntBASIC0.22□□□□□ -2.37
SPTLC2O15270 AC244090.1-201ENST00000441884 93 ntBASIC0.22□□□□□ -2.37
SPTLC2O15270 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
SPTLC2O15270 MIR924-201ENST00000638017 53 ntBASIC0.22□□□□□ -2.37
SPTLC2O15270 RNU6-587P-201ENST00000391282 106 ntBASIC0.21□□□□□ -2.38
SPTLC2O15270 RNA5SP163-201ENST00000410304 99 ntBASIC0.21□□□□□ -2.38
SPTLC2O15270 RNU6-982P-201ENST00000516216 102 ntBASIC0.21□□□□□ -2.38
SPTLC2O15270 RNU6-175P-201ENST00000516896 107 ntBASIC0.21□□□□□ -2.38
SPTLC2O15270 AC104408.1-201ENST00000605241 170 ntBASIC0.21□□□□□ -2.38
SPTLC2O15270 RNU6-895P-201ENST00000384125 103 ntBASIC0.2□□□□□ -2.38
SPTLC2O15270 MIR548C-201ENST00000384815 97 ntBASIC0.2□□□□□ -2.38
SPTLC2O15270 SNORA62.5-201ENST00000516634 120 ntBASIC0.2□□□□□ -2.38
SPTLC2O15270 RNU6-1015P-201ENST00000517121 99 ntBASIC0.2□□□□□ -2.38
SPTLC2O15270 AP000676.1-201ENST00000533307 52 ntBASIC0.2□□□□□ -2.38
SPTLC2O15270 MIR6514-201ENST00000622549 70 ntBASIC0.2□□□□□ -2.38
SPTLC2O15270 SNORD114-5-201ENST00000362928 70 ntBASIC0.19□□□□□ -2.38
SPTLC2O15270 RNU6-782P-201ENST00000516852 104 ntBASIC0.19□□□□□ -2.38
SPTLC2O15270 U6.96-201ENST00000636425 70 ntBASIC0.19□□□□□ -2.38
SPTLC2O15270 SNORD115-22-201ENST00000364456 82 ntBASIC0.18□□□□□ -2.38
SPTLC2O15270 SNORA33.1-201ENST00000364957 130 ntBASIC0.18□□□□□ -2.38
SPTLC2O15270 MIR610-201ENST00000385139 96 ntBASIC0.18□□□□□ -2.38
SPTLC2O15270 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
SPTLC2O15270 RNU6-881P-201ENST00000516813 102 ntBASIC0.18□□□□□ -2.38
SPTLC2O15270 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.18□□□□□ -2.38
SPTLC2O15270 RNA5SP214-201ENST00000363378 118 ntBASIC0.17□□□□□ -2.38
SPTLC2O15270 SNORD115-31-201ENST00000365318 82 ntBASIC0.17□□□□□ -2.38
SPTLC2O15270 MIR876-201ENST00000401147 81 ntBASIC0.17□□□□□ -2.38
SPTLC2O15270 RNU6-687P-201ENST00000516443 89 ntBASIC0.17□□□□□ -2.38
SPTLC2O15270 MIR330-201ENST00000362196 94 ntBASIC0.16□□□□□ -2.38
SPTLC2O15270 RNU6-645P-201ENST00000364649 106 ntBASIC0.16□□□□□ -2.38
SPTLC2O15270 RNU6-1162P-201ENST00000384443 104 ntBASIC0.16□□□□□ -2.38
SPTLC2O15270 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
SPTLC2O15270 RNA5SP330-201ENST00000517096 96 ntBASIC0.16□□□□□ -2.38
SPTLC2O15270 MIR8087-201ENST00000612745 78 ntBASIC0.16□□□□□ -2.38
SPTLC2O15270 MIR8053-201ENST00000613344 75 ntBASIC0.16□□□□□ -2.38
SPTLC2O15270 SNORD113.1-201ENST00000363280 73 ntBASIC0.15□□□□□ -2.39
SPTLC2O15270 MIR145-201ENST00000384967 88 ntBASIC0.15□□□□□ -2.39
SPTLC2O15270 SNORA49-201ENST00000386157 136 ntBASIC0.15□□□□□ -2.39
SPTLC2O15270 MIR1197-201ENST00000408818 88 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms