Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 RNU6-1113P-201ENST00000384348 107 ntBASIC-3.57□□□□□ -2.98
AP4S1Q9Y587 Y_RNA.485-201ENST00000384395 102 ntBASIC-3.57□□□□□ -2.98
AP4S1Q9Y587 SNORA40.4-201ENST00000390971 128 ntBASIC-3.57□□□□□ -2.98
AP4S1Q9Y587 Z99129.1-201ENST00000612510 255 ntBASIC-3.57□□□□□ -2.98
AP4S1Q9Y587 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.57□□□□□ -2.98
AP4S1Q9Y587 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-3.57□□□□□ -2.98
AP4S1Q9Y587 AC090574.1-201ENST00000623186 233 ntBASIC-3.57□□□□□ -2.98
AP4S1Q9Y587 Y_RNA.359-201ENST00000365498 102 ntBASIC-3.58□□□□□ -2.98
AP4S1Q9Y587 Y_RNA.496-201ENST00000384444 101 ntBASIC-3.58□□□□□ -2.98
AP4S1Q9Y587 MIR548C-201ENST00000384815 97 ntBASIC-3.58□□□□□ -2.98
AP4S1Q9Y587 MIR548D2-201ENST00000384955 97 ntBASIC-3.58□□□□□ -2.98
AP4S1Q9Y587 Y_RNA.661-201ENST00000516003 99 ntBASIC-3.58□□□□□ -2.98
AP4S1Q9Y587 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.58□□□□□ -2.98
AP4S1Q9Y587 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.59□□□□□ -2.98
AP4S1Q9Y587 RNU6-768P-201ENST00000384683 107 ntBASIC-3.59□□□□□ -2.98
AP4S1Q9Y587 RNU6-121P-201ENST00000410525 99 ntBASIC-3.59□□□□□ -2.98
AP4S1Q9Y587 RNU6-956P-201ENST00000458868 103 ntBASIC-3.59□□□□□ -2.98
AP4S1Q9Y587 RNU7-174P-201ENST00000516248 59 ntBASIC-3.59□□□□□ -2.98
AP4S1Q9Y587 Y_RNA.690-201ENST00000516603 95 ntBASIC-3.59□□□□□ -2.98
AP4S1Q9Y587 Y_RNA.721-201ENST00000517207 102 ntBASIC-3.59□□□□□ -2.98
AP4S1Q9Y587 RNU6-770P-201ENST00000363929 105 ntBASIC-3.6□□□□□ -2.99
AP4S1Q9Y587 RNU6-694P-201ENST00000364071 147 ntBASIC-3.6□□□□□ -2.99
AP4S1Q9Y587 RNU6-587P-201ENST00000391282 106 ntBASIC-3.6□□□□□ -2.99
AP4S1Q9Y587 RNU6-752P-201ENST00000516376 102 ntBASIC-3.6□□□□□ -2.99
AP4S1Q9Y587 Y_RNA.695-201ENST00000516715 107 ntBASIC-3.6□□□□□ -2.99
AP4S1Q9Y587 SNORD116.3-201ENST00000517176 78 ntBASIC-3.6□□□□□ -2.99
AP4S1Q9Y587 Y_RNA.16-201ENST00000362421 102 ntBASIC-3.61□□□□□ -2.99
AP4S1Q9Y587 SNORD18C-201ENST00000362704 69 ntBASIC-3.61□□□□□ -2.99
AP4S1Q9Y587 Y_RNA.183-201ENST00000363882 113 ntBASIC-3.61□□□□□ -2.99
AP4S1Q9Y587 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.61□□□□□ -2.99
AP4S1Q9Y587 Y_RNA.401-201ENST00000383965 117 ntBASIC-3.61□□□□□ -2.99
AP4S1Q9Y587 RNU6-510P-201ENST00000391239 108 ntBASIC-3.61□□□□□ -2.99
AP4S1Q9Y587 MTND4P17-201ENST00000470444 350 ntBASIC-3.61□□□□□ -2.99
AP4S1Q9Y587 MIR5690-201ENST00000583739 73 ntBASIC-3.61□□□□□ -2.99
AP4S1Q9Y587 RNU6-1119P-201ENST00000384349 108 ntBASIC-3.62□□□□□ -2.99
AP4S1Q9Y587 Y_RNA.507-201ENST00000384500 99 ntBASIC-3.62□□□□□ -2.99
AP4S1Q9Y587 MIR548AA1-201ENST00000384971 97 ntBASIC-3.62□□□□□ -2.99
AP4S1Q9Y587 Y_RNA.606-201ENST00000410579 103 ntBASIC-3.62□□□□□ -2.99
AP4S1Q9Y587 RNY3P8-201ENST00000411366 126 ntBASIC-3.62□□□□□ -2.99
AP4S1Q9Y587 SNORA27.2-201ENST00000363365 126 ntBASIC-3.63□□□□□ -2.99
AP4S1Q9Y587 Y_RNA.154-201ENST00000363624 102 ntBASIC-3.63□□□□□ -2.99
AP4S1Q9Y587 RNU6-259P-201ENST00000383999 107 ntBASIC-3.63□□□□□ -2.99
AP4S1Q9Y587 RNU6-644P-201ENST00000391155 98 ntBASIC-3.63□□□□□ -2.99
AP4S1Q9Y587 RNU6-995P-201ENST00000391244 107 ntBASIC-3.63□□□□□ -2.99
AP4S1Q9Y587 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.64□□□□□ -2.99
AP4S1Q9Y587 Y_RNA.198-201ENST00000364013 98 ntBASIC-3.64□□□□□ -2.99
AP4S1Q9Y587 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.64□□□□□ -2.99
AP4S1Q9Y587 Y_RNA.419-201ENST00000384041 102 ntBASIC-3.64□□□□□ -2.99
AP4S1Q9Y587 MIR3144-201ENST00000579460 79 ntBASIC-3.64□□□□□ -2.99
AP4S1Q9Y587 MTRNR2L9-201ENST00000622562 75 ntBASIC-3.64□□□□□ -2.99
AP4S1Q9Y587 Y_RNA.213-201ENST00000364178 111 ntBASIC-3.65□□□□□ -2.99
AP4S1Q9Y587 RNU6-519P-201ENST00000410590 108 ntBASIC-3.65□□□□□ -2.99
AP4S1Q9Y587 DLEU2_1.1-201ENST00000612089 120 ntBASIC-3.65□□□□□ -2.99
AP4S1Q9Y587 RNU6-645P-201ENST00000364649 106 ntBASIC-3.66□□□□□ -3
AP4S1Q9Y587 AC109635.3-201ENST00000529536 185 ntBASIC-3.66□□□□□ -3
AP4S1Q9Y587 MIR3149-201ENST00000584629 83 ntBASIC-3.66□□□□□ -3
AP4S1Q9Y587 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-3.66□□□□□ -3
AP4S1Q9Y587 SNORD18B-201ENST00000365659 72 ntBASIC-3.67□□□□□ -3
AP4S1Q9Y587 RNU6-1081P-201ENST00000384537 107 ntBASIC-3.67□□□□□ -3
AP4S1Q9Y587 MIR581-201ENST00000384895 96 ntBASIC-3.67□□□□□ -3
AP4S1Q9Y587 DEFB108C-201ENST00000400154 252 ntBASIC-3.67□□□□□ -3
AP4S1Q9Y587 Y_RNA.797-201ENST00000515977 94 ntBASIC-3.67□□□□□ -3
AP4S1Q9Y587 Y_RNA.686-201ENST00000516548 134 ntBASIC-3.67□□□□□ -3
AP4S1Q9Y587 MIR577-201ENST00000385196 96 ntBASIC-3.68□□□□□ -3
AP4S1Q9Y587 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.68□□□□□ -3
AP4S1Q9Y587 MIR3646-201ENST00000578301 84 ntBASIC-3.68□□□□□ -3
AP4S1Q9Y587 AL603755.1-201ENST00000619504 163 ntBASIC-3.68□□□□□ -3
AP4S1Q9Y587 SNORD113-3-201ENST00000364830 72 ntBASIC-3.69□□□□□ -3
AP4S1Q9Y587 Y_RNA.635-201ENST00000459041 101 ntBASIC-3.69□□□□□ -3
AP4S1Q9Y587 RNU5E-3P-201ENST00000515913 68 ntBASIC-3.69□□□□□ -3
AP4S1Q9Y587 Y_RNA.559-201ENST00000384686 107 ntBASIC-3.7□□□□□ -3
AP4S1Q9Y587 MIR620-201ENST00000385232 95 ntBASIC-3.7□□□□□ -3
AP4S1Q9Y587 RNU6-816P-201ENST00000390914 107 ntBASIC-3.7□□□□□ -3
AP4S1Q9Y587 RNU6-1268P-201ENST00000391214 107 ntBASIC-3.7□□□□□ -3
AP4S1Q9Y587 RNU6-1239P-201ENST00000391310 107 ntBASIC-3.7□□□□□ -3
AP4S1Q9Y587 AC103810.7-201ENST00000607821 91 ntBASIC-3.71□□□□□ -3
AP4S1Q9Y587 U4.4-201ENST00000620626 117 ntBASIC-3.71□□□□□ -3
AP4S1Q9Y587 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.72□□□□□ -3
AP4S1Q9Y587 SNORA75.5-201ENST00000391291 81 ntBASIC-3.72□□□□□ -3
AP4S1Q9Y587 SNORD63.2-201ENST00000516303 64 ntBASIC-3.72□□□□□ -3
AP4S1Q9Y587 RNU6-669P-201ENST00000365575 107 ntBASIC-3.73□□□□□ -3.01
AP4S1Q9Y587 Y_RNA.44-201ENST00000362676 108 ntBASIC-3.74□□□□□ -3.01
AP4S1Q9Y587 RNY4P7-201ENST00000364600 96 ntBASIC-3.74□□□□□ -3.01
AP4S1Q9Y587 Y_RNA.553-201ENST00000384670 102 ntBASIC-3.74□□□□□ -3.01
AP4S1Q9Y587 MIR4282-201ENST00000583613 67 ntBASIC-3.74□□□□□ -3.01
AP4S1Q9Y587 Y_RNA.89-201ENST00000363031 102 ntBASIC-3.75□□□□□ -3.01
AP4S1Q9Y587 RNY1P1-201ENST00000364372 112 ntBASIC-3.75□□□□□ -3.01
AP4S1Q9Y587 Y_RNA.262-201ENST00000364641 102 ntBASIC-3.75□□□□□ -3.01
AP4S1Q9Y587 AC012531.4-201ENST00000616509 177 ntBASIC-3.75□□□□□ -3.01
AP4S1Q9Y587 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-3.75□□□□□ -3.01
AP4S1Q9Y587 RNU6-340P-201ENST00000364005 107 ntBASIC-3.76□□□□□ -3.01
AP4S1Q9Y587 Y_RNA.8-201ENST00000362353 102 ntBASIC-3.77□□□□□ -3.01
AP4S1Q9Y587 Y_RNA.51-201ENST00000362725 102 ntBASIC-3.77□□□□□ -3.01
AP4S1Q9Y587 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.77□□□□□ -3.01
AP4S1Q9Y587 Y_RNA.352-201ENST00000365439 102 ntBASIC-3.77□□□□□ -3.01
AP4S1Q9Y587 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.77□□□□□ -3.01
AP4S1Q9Y587 Y_RNA.590-201ENST00000410140 107 ntBASIC-3.77□□□□□ -3.01
AP4S1Q9Y587 MIR3613-201ENST00000579844 87 ntBASIC-3.77□□□□□ -3.01
AP4S1Q9Y587 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-3.77□□□□□ -3.01
AP4S1Q9Y587 AC002553.4-201ENST00000616896 331 ntBASIC-3.77□□□□□ -3.01
Retrieved 100 of 98,524 protein–RNA pairs in 207.3 ms