Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RNU7-197P-201ENST00000458836 62 ntBASIC-1.42□□□□□ -2.64
RHBDD3Q9Y3P4 SNORD4B-201ENST00000459083 72 ntBASIC-1.42□□□□□ -2.64
RHBDD3Q9Y3P4 MIR548AG1-201ENST00000579932 66 ntBASIC-1.42□□□□□ -2.64
RHBDD3Q9Y3P4 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.42□□□□□ -2.64
RHBDD3Q9Y3P4 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.42□□□□□ -2.64
RHBDD3Q9Y3P4 AC141273.2-201ENST00000618989 130 ntBASIC-1.42□□□□□ -2.64
RHBDD3Q9Y3P4 MIR1246-201ENST00000636535 73 ntBASIC-1.42□□□□□ -2.64
RHBDD3Q9Y3P4 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.43□□□□□ -2.64
RHBDD3Q9Y3P4 RNU6-915P-201ENST00000364943 103 ntBASIC-1.43□□□□□ -2.64
RHBDD3Q9Y3P4 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.43□□□□□ -2.64
RHBDD3Q9Y3P4 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.43□□□□□ -2.64
RHBDD3Q9Y3P4 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.43□□□□□ -2.64
RHBDD3Q9Y3P4 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.43□□□□□ -2.64
RHBDD3Q9Y3P4 MIR4520-1-201ENST00000582609 70 ntBASIC-1.43□□□□□ -2.64
RHBDD3Q9Y3P4 MIR3657-201ENST00000584818 117 ntBASIC-1.43□□□□□ -2.64
RHBDD3Q9Y3P4 MIR6509-201ENST00000614603 85 ntBASIC-1.43□□□□□ -2.64
RHBDD3Q9Y3P4 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.43□□□□□ -2.64
RHBDD3Q9Y3P4 MIR4773-1-201ENST00000637203 78 ntBASIC-1.43□□□□□ -2.64
RHBDD3Q9Y3P4 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.44□□□□□ -2.64
RHBDD3Q9Y3P4 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.44□□□□□ -2.64
RHBDD3Q9Y3P4 SNORD114-3-201ENST00000364969 75 ntBASIC-1.44□□□□□ -2.64
RHBDD3Q9Y3P4 SNORD19-201ENST00000391191 68 ntBASIC-1.44□□□□□ -2.64
RHBDD3Q9Y3P4 SNORD58.1-201ENST00000391313 66 ntBASIC-1.44□□□□□ -2.64
RHBDD3Q9Y3P4 RNA5SP136-201ENST00000410906 107 ntBASIC-1.44□□□□□ -2.64
RHBDD3Q9Y3P4 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.44□□□□□ -2.64
RHBDD3Q9Y3P4 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.45□□□□□ -2.64
RHBDD3Q9Y3P4 RNU6-80P-201ENST00000384195 107 ntBASIC-1.45□□□□□ -2.64
RHBDD3Q9Y3P4 MIR548U-201ENST00000390728 81 ntBASIC-1.45□□□□□ -2.64
RHBDD3Q9Y3P4 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.45□□□□□ -2.64
RHBDD3Q9Y3P4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.45□□□□□ -2.64
RHBDD3Q9Y3P4 SNORA18.5-201ENST00000516616 101 ntBASIC-1.45□□□□□ -2.64
RHBDD3Q9Y3P4 AC130289.1-201ENST00000577321 73 ntBASIC-1.45□□□□□ -2.64
RHBDD3Q9Y3P4 MIR6502-201ENST00000617296 76 ntBASIC-1.45□□□□□ -2.64
RHBDD3Q9Y3P4 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.46□□□□□ -2.64
RHBDD3Q9Y3P4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.46□□□□□ -2.64
RHBDD3Q9Y3P4 RPL35AP4-201ENST00000412007 102 ntBASIC-1.46□□□□□ -2.64
RHBDD3Q9Y3P4 AL353691.2-201ENST00000443795 59 ntBASIC-1.46□□□□□ -2.64
RHBDD3Q9Y3P4 AC103810.7-201ENST00000607821 91 ntBASIC-1.46□□□□□ -2.64
RHBDD3Q9Y3P4 SNORA2.1-201ENST00000363089 137 ntBASIC-1.47□□□□□ -2.64
RHBDD3Q9Y3P4 RNU6-164P-201ENST00000364604 103 ntBASIC-1.47□□□□□ -2.64
RHBDD3Q9Y3P4 RNU4-11P-201ENST00000365287 132 ntBASIC-1.47□□□□□ -2.64
RHBDD3Q9Y3P4 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.47□□□□□ -2.64
RHBDD3Q9Y3P4 MIR1207-201ENST00000408249 87 ntBASIC-1.47□□□□□ -2.64
RHBDD3Q9Y3P4 SNORA19.1-201ENST00000410656 129 ntBASIC-1.47□□□□□ -2.64
RHBDD3Q9Y3P4 AC022028.1-201ENST00000412054 408 ntBASIC-1.47□□□□□ -2.64
RHBDD3Q9Y3P4 RNU7-88P-201ENST00000458752 63 ntBASIC-1.47□□□□□ -2.64
RHBDD3Q9Y3P4 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.47□□□□□ -2.64
RHBDD3Q9Y3P4 MIR548Z-201ENST00000584743 97 ntBASIC-1.47□□□□□ -2.64
RHBDD3Q9Y3P4 RNU6-774P-201ENST00000363238 107 ntBASIC-1.48□□□□□ -2.65
RHBDD3Q9Y3P4 RNU6-832P-201ENST00000363319 107 ntBASIC-1.48□□□□□ -2.65
RHBDD3Q9Y3P4 RNY4P6-201ENST00000363667 96 ntBASIC-1.48□□□□□ -2.65
RHBDD3Q9Y3P4 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.48□□□□□ -2.65
RHBDD3Q9Y3P4 AL078595.1-201ENST00000404458 226 ntBASIC-1.48□□□□□ -2.65
RHBDD3Q9Y3P4 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.48□□□□□ -2.65
RHBDD3Q9Y3P4 RNU6-412P-201ENST00000516434 106 ntBASIC-1.48□□□□□ -2.65
RHBDD3Q9Y3P4 AC006254.2-201ENST00000603259 279 ntBASIC-1.48□□□□□ -2.65
RHBDD3Q9Y3P4 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.49□□□□□ -2.65
RHBDD3Q9Y3P4 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.49□□□□□ -2.65
RHBDD3Q9Y3P4 SNORA33.2-201ENST00000365413 134 ntBASIC-1.49□□□□□ -2.65
RHBDD3Q9Y3P4 RNU6-540P-201ENST00000384622 101 ntBASIC-1.49□□□□□ -2.65
RHBDD3Q9Y3P4 U7.5-201ENST00000517224 61 ntBASIC-1.49□□□□□ -2.65
RHBDD3Q9Y3P4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.49□□□□□ -2.65
RHBDD3Q9Y3P4 RNY3P14-201ENST00000384309 102 ntBASIC-1.5□□□□□ -2.65
RHBDD3Q9Y3P4 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.5□□□□□ -2.65
RHBDD3Q9Y3P4 RNU6-644P-201ENST00000391155 98 ntBASIC-1.5□□□□□ -2.65
RHBDD3Q9Y3P4 AC090616.4-201ENST00000448026 115 ntBASIC-1.5□□□□□ -2.65
RHBDD3Q9Y3P4 RNU6-732P-201ENST00000516033 103 ntBASIC-1.5□□□□□ -2.65
RHBDD3Q9Y3P4 RNU6-518P-201ENST00000516056 96 ntBASIC-1.5□□□□□ -2.65
RHBDD3Q9Y3P4 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.5□□□□□ -2.65
RHBDD3Q9Y3P4 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.5□□□□□ -2.65
RHBDD3Q9Y3P4 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.51□□□□□ -2.65
RHBDD3Q9Y3P4 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.51□□□□□ -2.65
RHBDD3Q9Y3P4 RNU6-246P-201ENST00000384702 107 ntBASIC-1.51□□□□□ -2.65
RHBDD3Q9Y3P4 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.51□□□□□ -2.65
RHBDD3Q9Y3P4 MIR521-2-201ENST00000384818 87 ntBASIC-1.51□□□□□ -2.65
RHBDD3Q9Y3P4 MIR548I1-201ENST00000408810 149 ntBASIC-1.51□□□□□ -2.65
RHBDD3Q9Y3P4 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.51□□□□□ -2.65
RHBDD3Q9Y3P4 AL158147.1-201ENST00000443970 75 ntBASIC-1.51□□□□□ -2.65
RHBDD3Q9Y3P4 AL691482.2-201ENST00000457453 84 ntBASIC-1.51□□□□□ -2.65
RHBDD3Q9Y3P4 RNU7-154P-201ENST00000516194 62 ntBASIC-1.51□□□□□ -2.65
RHBDD3Q9Y3P4 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.51□□□□□ -2.65
RHBDD3Q9Y3P4 RNU6-62P-201ENST00000516526 102 ntBASIC-1.51□□□□□ -2.65
RHBDD3Q9Y3P4 MIR4694-201ENST00000578534 80 ntBASIC-1.51□□□□□ -2.65
RHBDD3Q9Y3P4 MIR5683-201ENST00000636514 76 ntBASIC-1.51□□□□□ -2.65
RHBDD3Q9Y3P4 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.52□□□□□ -2.65
RHBDD3Q9Y3P4 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.52□□□□□ -2.65
RHBDD3Q9Y3P4 MTATP6P29-201ENST00000415057 132 ntBASIC-1.52□□□□□ -2.65
RHBDD3Q9Y3P4 MTND3P2-201ENST00000438452 342 ntBASIC-1.52□□□□□ -2.65
RHBDD3Q9Y3P4 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.52□□□□□ -2.65
RHBDD3Q9Y3P4 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.53□□□□□ -2.65
RHBDD3Q9Y3P4 RNY4P27-201ENST00000363341 96 ntBASIC-1.53□□□□□ -2.65
RHBDD3Q9Y3P4 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.53□□□□□ -2.65
RHBDD3Q9Y3P4 RNU6-639P-201ENST00000384074 107 ntBASIC-1.53□□□□□ -2.65
RHBDD3Q9Y3P4 RNU6-519P-201ENST00000410590 108 ntBASIC-1.53□□□□□ -2.65
RHBDD3Q9Y3P4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.53□□□□□ -2.65
RHBDD3Q9Y3P4 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.53□□□□□ -2.65
RHBDD3Q9Y3P4 RNU6-111P-201ENST00000517179 105 ntBASIC-1.53□□□□□ -2.65
RHBDD3Q9Y3P4 SNORA81.3-201ENST00000517283 198 ntBASIC-1.53□□□□□ -2.65
RHBDD3Q9Y3P4 MIR548S-201ENST00000581352 82 ntBASIC-1.53□□□□□ -2.65
RHBDD3Q9Y3P4 AL035470.1-201ENST00000622571 220 ntBASIC-1.53□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms