Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 RNU4-62P-201ENST00000410125 130 ntBASIC1.43□□□□□ -2.18
PCDHGC3Q9UN70 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.43□□□□□ -2.18
PCDHGC3Q9UN70 AC021146.9-201ENST00000512503 156 ntBASIC1.43□□□□□ -2.18
PCDHGC3Q9UN70 RNA5SP94-201ENST00000516917 108 ntBASIC1.43□□□□□ -2.18
PCDHGC3Q9UN70 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
PCDHGC3Q9UN70 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.43□□□□□ -2.18
PCDHGC3Q9UN70 uc_338.10-201ENST00000621872 182 ntBASIC1.43□□□□□ -2.18
PCDHGC3Q9UN70 SNORA36.1-201ENST00000363424 132 ntBASIC1.42□□□□□ -2.18
PCDHGC3Q9UN70 RNA5SP99-201ENST00000364020 114 ntBASIC1.41□□□□□ -2.18
PCDHGC3Q9UN70 AC108667.1-201ENST00000428618 249 ntBASIC1.41□□□□□ -2.18
PCDHGC3Q9UN70 AC068338.1-201ENST00000565567 176 ntBASIC1.41□□□□□ -2.18
PCDHGC3Q9UN70 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.41□□□□□ -2.18
PCDHGC3Q9UN70 RNU7-95P-201ENST00000459222 64 ntBASIC1.4□□□□□ -2.19
PCDHGC3Q9UN70 MIR4421-201ENST00000578133 69 ntBASIC1.4□□□□□ -2.19
PCDHGC3Q9UN70 MIR3660-201ENST00000584845 100 ntBASIC1.4□□□□□ -2.19
PCDHGC3Q9UN70 SNORA63.6-201ENST00000364921 119 ntBASIC1.39□□□□□ -2.19
PCDHGC3Q9UN70 MIR652-201ENST00000385278 98 ntBASIC1.39□□□□□ -2.19
PCDHGC3Q9UN70 AC079150.2-201ENST00000443733 78 ntBASIC1.39□□□□□ -2.19
PCDHGC3Q9UN70 AL157398.1-201ENST00000452981 186 ntBASIC1.39□□□□□ -2.19
PCDHGC3Q9UN70 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
PCDHGC3Q9UN70 RNA5SP192-201ENST00000364404 120 ntBASIC1.38□□□□□ -2.19
PCDHGC3Q9UN70 RNU6-614P-201ENST00000384369 107 ntBASIC1.38□□□□□ -2.19
PCDHGC3Q9UN70 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
PCDHGC3Q9UN70 RNA5SP222-201ENST00000411039 105 ntBASIC1.38□□□□□ -2.19
PCDHGC3Q9UN70 Y_RNA.633-201ENST00000459107 95 ntBASIC1.38□□□□□ -2.19
PCDHGC3Q9UN70 AL353765.1-201ENST00000605514 183 ntBASIC1.38□□□□□ -2.19
PCDHGC3Q9UN70 MIR7107-201ENST00000611489 80 ntBASIC1.38□□□□□ -2.19
PCDHGC3Q9UN70 U6.59-201ENST00000615686 107 ntBASIC1.38□□□□□ -2.19
PCDHGC3Q9UN70 MIR548C-201ENST00000384815 97 ntBASIC1.37□□□□□ -2.19
PCDHGC3Q9UN70 MIR633-201ENST00000384821 98 ntBASIC1.37□□□□□ -2.19
PCDHGC3Q9UN70 AL603825.1-201ENST00000438481 80 ntBASIC1.37□□□□□ -2.19
PCDHGC3Q9UN70 RNA5SP458-201ENST00000516188 119 ntBASIC1.37□□□□□ -2.19
PCDHGC3Q9UN70 MIR466-201ENST00000580653 84 ntBASIC1.37□□□□□ -2.19
PCDHGC3Q9UN70 RNU6-92P-201ENST00000605893 104 ntBASIC1.37□□□□□ -2.19
PCDHGC3Q9UN70 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
PCDHGC3Q9UN70 AP1B1P2-201ENST00000416196 106 ntBASIC1.36□□□□□ -2.19
PCDHGC3Q9UN70 snoU13.13-201ENST00000458842 104 ntBASIC1.36□□□□□ -2.19
PCDHGC3Q9UN70 MIR5706-201ENST00000579841 80 ntBASIC1.36□□□□□ -2.19
PCDHGC3Q9UN70 MIR4661-201ENST00000582720 75 ntBASIC1.36□□□□□ -2.19
PCDHGC3Q9UN70 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
PCDHGC3Q9UN70 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.35□□□□□ -2.19
PCDHGC3Q9UN70 MIR4473-201ENST00000583731 91 ntBASIC1.35□□□□□ -2.19
PCDHGC3Q9UN70 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
PCDHGC3Q9UN70 RNU6-939P-201ENST00000384634 107 ntBASIC1.34□□□□□ -2.19
PCDHGC3Q9UN70 MIR517B-201ENST00000385102 67 ntBASIC1.34□□□□□ -2.19
PCDHGC3Q9UN70 MIR548V-201ENST00000584165 80 ntBASIC1.34□□□□□ -2.19
PCDHGC3Q9UN70 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
PCDHGC3Q9UN70 SNORD113-2-201ENST00000391082 72 ntBASIC1.33□□□□□ -2.2
PCDHGC3Q9UN70 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
PCDHGC3Q9UN70 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
PCDHGC3Q9UN70 RNU6-122P-201ENST00000516818 107 ntBASIC1.32□□□□□ -2.2
PCDHGC3Q9UN70 MIR548AE1-201ENST00000583292 70 ntBASIC1.31□□□□□ -2.2
PCDHGC3Q9UN70 U7.6-201ENST00000610841 64 ntBASIC1.31□□□□□ -2.2
PCDHGC3Q9UN70 MIR378A-201ENST00000362177 66 ntBASIC1.3□□□□□ -2.2
PCDHGC3Q9UN70 Y_RNA.125-201ENST00000363371 111 ntBASIC1.3□□□□□ -2.2
PCDHGC3Q9UN70 RNU6-698P-201ENST00000363523 107 ntBASIC1.3□□□□□ -2.2
PCDHGC3Q9UN70 RNU6-34P-201ENST00000364874 107 ntBASIC1.3□□□□□ -2.2
PCDHGC3Q9UN70 SNORA33.1-201ENST00000364957 130 ntBASIC1.29□□□□□ -2.2
PCDHGC3Q9UN70 SNORD2-201ENST00000459163 69 ntBASIC1.29□□□□□ -2.2
PCDHGC3Q9UN70 U2.7-201ENST00000619197 100 ntBASIC1.29□□□□□ -2.2
PCDHGC3Q9UN70 AL353770.2-201ENST00000620024 78 ntBASIC1.29□□□□□ -2.2
PCDHGC3Q9UN70 RNU6-1079P-201ENST00000362861 110 ntBASIC1.28□□□□□ -2.2
PCDHGC3Q9UN70 SNORA36.2-201ENST00000384004 127 ntBASIC1.28□□□□□ -2.2
PCDHGC3Q9UN70 MIR548E-201ENST00000408287 88 ntBASIC1.28□□□□□ -2.2
PCDHGC3Q9UN70 RNU6-141P-201ENST00000410499 105 ntBASIC1.28□□□□□ -2.2
PCDHGC3Q9UN70 MIR20A-201ENST00000362279 71 ntBASIC1.27□□□□□ -2.21
PCDHGC3Q9UN70 MIR630-201ENST00000384957 97 ntBASIC1.27□□□□□ -2.21
PCDHGC3Q9UN70 MIR140-201ENST00000385282 100 ntBASIC1.27□□□□□ -2.21
PCDHGC3Q9UN70 AC244090.1-201ENST00000441884 93 ntBASIC1.27□□□□□ -2.21
PCDHGC3Q9UN70 RNU7-174P-201ENST00000516248 59 ntBASIC1.27□□□□□ -2.21
PCDHGC3Q9UN70 MIR3938-201ENST00000582157 103 ntBASIC1.27□□□□□ -2.21
PCDHGC3Q9UN70 SNORA70.25-201ENST00000612741 95 ntBASIC1.27□□□□□ -2.21
PCDHGC3Q9UN70 RNU6-829P-201ENST00000363700 112 ntBASIC1.26□□□□□ -2.21
PCDHGC3Q9UN70 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
PCDHGC3Q9UN70 MIR582-201ENST00000365731 98 ntBASIC1.25□□□□□ -2.21
PCDHGC3Q9UN70 RNA5SP517-201ENST00000364724 117 ntBASIC1.24□□□□□ -2.21
PCDHGC3Q9UN70 MIR4498-201ENST00000577599 66 ntBASIC1.24□□□□□ -2.21
PCDHGC3Q9UN70 snoU13.31-201ENST00000607291 104 ntBASIC1.24□□□□□ -2.21
PCDHGC3Q9UN70 U6.96-201ENST00000636425 70 ntBASIC1.24□□□□□ -2.21
PCDHGC3Q9UN70 SNORD60.1-201ENST00000362451 73 ntBASIC1.23□□□□□ -2.21
PCDHGC3Q9UN70 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.23□□□□□ -2.21
PCDHGC3Q9UN70 MIR4752-201ENST00000579672 72 ntBASIC1.23□□□□□ -2.21
PCDHGC3Q9UN70 HMGN2P22-201ENST00000427588 175 ntBASIC1.22□□□□□ -2.21
PCDHGC3Q9UN70 SNORD114-29-201ENST00000364819 70 ntBASIC1.21□□□□□ -2.22
PCDHGC3Q9UN70 Y_RNA.338-201ENST00000365320 114 ntBASIC1.21□□□□□ -2.22
PCDHGC3Q9UN70 SNORA2A-201ENST00000383885 135 ntBASIC1.21□□□□□ -2.22
PCDHGC3Q9UN70 MIR608-201ENST00000384820 100 ntBASIC1.21□□□□□ -2.22
PCDHGC3Q9UN70 SNORD71-201ENST00000411292 86 ntBASIC1.21□□□□□ -2.22
PCDHGC3Q9UN70 Y_RNA.236-201ENST00000364427 111 ntBASIC1.2□□□□□ -2.22
PCDHGC3Q9UN70 SNORA40.8-201ENST00000411034 126 ntBASIC1.2□□□□□ -2.22
PCDHGC3Q9UN70 AC069271.1-201ENST00000445577 156 ntBASIC1.2□□□□□ -2.22
PCDHGC3Q9UN70 RNU6-848P-201ENST00000515948 107 ntBASIC1.2□□□□□ -2.22
PCDHGC3Q9UN70 RNU6-617P-201ENST00000516147 107 ntBASIC1.2□□□□□ -2.22
PCDHGC3Q9UN70 RNU6-473P-201ENST00000516164 107 ntBASIC1.2□□□□□ -2.22
PCDHGC3Q9UN70 RNU6-1049P-201ENST00000516414 107 ntBASIC1.2□□□□□ -2.22
PCDHGC3Q9UN70 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
PCDHGC3Q9UN70 SNORD118-201ENST00000363593 134 ntBASIC1.19□□□□□ -2.22
PCDHGC3Q9UN70 MIR516B1-201ENST00000385211 90 ntBASIC1.19□□□□□ -2.22
PCDHGC3Q9UN70 AL021921.1-201ENST00000442774 93 ntBASIC1.19□□□□□ -2.22
PCDHGC3Q9UN70 CYP3A54P-201ENST00000566950 75 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms