Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.58□□□□□ -2.66
PHRF1Q9P1Y6 AL691482.2-201ENST00000457453 84 ntBASIC-1.58□□□□□ -2.66
PHRF1Q9P1Y6 RNU6-875P-201ENST00000516488 106 ntBASIC-1.58□□□□□ -2.66
PHRF1Q9P1Y6 MIR3139-201ENST00000579145 76 ntBASIC-1.58□□□□□ -2.66
PHRF1Q9P1Y6 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.58□□□□□ -2.66
PHRF1Q9P1Y6 U6atac.1-201ENST00000616025 117 ntBASIC-1.58□□□□□ -2.66
PHRF1Q9P1Y6 RNY1P11-201ENST00000363759 113 ntBASIC-1.59□□□□□ -2.66
PHRF1Q9P1Y6 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.59□□□□□ -2.66
PHRF1Q9P1Y6 MIR487B-201ENST00000385021 84 ntBASIC-1.59□□□□□ -2.66
PHRF1Q9P1Y6 MT-TW-201ENST00000387382 68 ntBASIC-1.59□□□□□ -2.66
PHRF1Q9P1Y6 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.59□□□□□ -2.66
PHRF1Q9P1Y6 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.59□□□□□ -2.66
PHRF1Q9P1Y6 SNORD115-27-201ENST00000364430 82 ntBASIC-1.6□□□□□ -2.67
PHRF1Q9P1Y6 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.6□□□□□ -2.67
PHRF1Q9P1Y6 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.6□□□□□ -2.67
PHRF1Q9P1Y6 MIR548D2-201ENST00000384955 97 ntBASIC-1.6□□□□□ -2.67
PHRF1Q9P1Y6 AL513043.2-201ENST00000573941 143 ntBASIC-1.6□□□□□ -2.67
PHRF1Q9P1Y6 MIR548Z-201ENST00000584743 97 ntBASIC-1.6□□□□□ -2.67
PHRF1Q9P1Y6 AC025521.1-201ENST00000621624 286 ntBASIC-1.6□□□□□ -2.67
PHRF1Q9P1Y6 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.61□□□□□ -2.67
PHRF1Q9P1Y6 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.61□□□□□ -2.67
PHRF1Q9P1Y6 AC018880.2-201ENST00000414265 201 ntBASIC-1.61□□□□□ -2.67
PHRF1Q9P1Y6 U7.5-201ENST00000517224 61 ntBASIC-1.61□□□□□ -2.67
PHRF1Q9P1Y6 AC130289.1-201ENST00000577321 73 ntBASIC-1.61□□□□□ -2.67
PHRF1Q9P1Y6 U6.104-201ENST00000637979 90 ntBASIC-1.61□□□□□ -2.67
PHRF1Q9P1Y6 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.62□□□□□ -2.67
PHRF1Q9P1Y6 SNORA33.1-201ENST00000364957 130 ntBASIC-1.62□□□□□ -2.67
PHRF1Q9P1Y6 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.62□□□□□ -2.67
PHRF1Q9P1Y6 MIR203A-201ENST00000384836 110 ntBASIC-1.62□□□□□ -2.67
PHRF1Q9P1Y6 MIR577-201ENST00000385196 96 ntBASIC-1.62□□□□□ -2.67
PHRF1Q9P1Y6 RNU2-38P-201ENST00000410856 79 ntBASIC-1.62□□□□□ -2.67
PHRF1Q9P1Y6 SNORD4B-201ENST00000459083 72 ntBASIC-1.62□□□□□ -2.67
PHRF1Q9P1Y6 MIR3657-201ENST00000584818 117 ntBASIC-1.62□□□□□ -2.67
PHRF1Q9P1Y6 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.62□□□□□ -2.67
PHRF1Q9P1Y6 RNU6-238P-201ENST00000363313 106 ntBASIC-1.62□□□□□ -2.67
PHRF1Q9P1Y6 RNU6-239P-201ENST00000390990 99 ntBASIC-1.62□□□□□ -2.67
PHRF1Q9P1Y6 AL589823.1-201ENST00000429577 183 ntBASIC-1.62□□□□□ -2.67
PHRF1Q9P1Y6 snoU13.17-201ENST00000458802 104 ntBASIC-1.62□□□□□ -2.67
PHRF1Q9P1Y6 RNA5SP147-201ENST00000516493 109 ntBASIC-1.62□□□□□ -2.67
PHRF1Q9P1Y6 MIR664B-201ENST00000626756 61 ntBASIC-1.62□□□□□ -2.67
PHRF1Q9P1Y6 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.63□□□□□ -2.67
PHRF1Q9P1Y6 RNU6-474P-201ENST00000384243 107 ntBASIC-1.63□□□□□ -2.67
PHRF1Q9P1Y6 RNU6-985P-201ENST00000410182 104 ntBASIC-1.63□□□□□ -2.67
PHRF1Q9P1Y6 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.63□□□□□ -2.67
PHRF1Q9P1Y6 RNY4-201ENST00000516507 96 ntBASIC-1.63□□□□□ -2.67
PHRF1Q9P1Y6 RNU7-121P-201ENST00000516604 62 ntBASIC-1.63□□□□□ -2.67
PHRF1Q9P1Y6 MIR4439-201ENST00000583746 80 ntBASIC-1.63□□□□□ -2.67
PHRF1Q9P1Y6 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.64□□□□□ -2.67
PHRF1Q9P1Y6 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.64□□□□□ -2.67
PHRF1Q9P1Y6 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.64□□□□□ -2.67
PHRF1Q9P1Y6 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.64□□□□□ -2.67
PHRF1Q9P1Y6 RNU6-79P-201ENST00000362511 107 ntBASIC-1.65□□□□□ -2.67
PHRF1Q9P1Y6 RNU6-713P-201ENST00000384761 107 ntBASIC-1.65□□□□□ -2.67
PHRF1Q9P1Y6 SNORD19-201ENST00000391191 68 ntBASIC-1.65□□□□□ -2.67
PHRF1Q9P1Y6 MIR5683-201ENST00000636514 76 ntBASIC-1.65□□□□□ -2.67
PHRF1Q9P1Y6 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.66□□□□□ -2.67
PHRF1Q9P1Y6 RNU6-382P-201ENST00000365181 106 ntBASIC-1.66□□□□□ -2.67
PHRF1Q9P1Y6 RNU6-644P-201ENST00000391155 98 ntBASIC-1.66□□□□□ -2.67
PHRF1Q9P1Y6 AC134503.1-201ENST00000633048 54 ntBASIC-1.66□□□□□ -2.67
PHRF1Q9P1Y6 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.66□□□□□ -2.68
PHRF1Q9P1Y6 MIR1263-201ENST00000408324 86 ntBASIC-1.66□□□□□ -2.68
PHRF1Q9P1Y6 SNORD54-201ENST00000459159 67 ntBASIC-1.66□□□□□ -2.68
PHRF1Q9P1Y6 AP002795.1-201ENST00000534879 84 ntBASIC-1.66□□□□□ -2.68
PHRF1Q9P1Y6 RNU6-774P-201ENST00000363238 107 ntBASIC-1.67□□□□□ -2.68
PHRF1Q9P1Y6 RNU6-832P-201ENST00000363319 107 ntBASIC-1.67□□□□□ -2.68
PHRF1Q9P1Y6 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.67□□□□□ -2.68
PHRF1Q9P1Y6 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.67□□□□□ -2.68
PHRF1Q9P1Y6 SNORD37.2-201ENST00000391075 66 ntBASIC-1.67□□□□□ -2.68
PHRF1Q9P1Y6 AC090616.4-201ENST00000448026 115 ntBASIC-1.67□□□□□ -2.68
PHRF1Q9P1Y6 RNU6-168P-201ENST00000516189 101 ntBASIC-1.67□□□□□ -2.68
PHRF1Q9P1Y6 MIR3064-201ENST00000581130 66 ntBASIC-1.67□□□□□ -2.68
PHRF1Q9P1Y6 RNA5SP405-201ENST00000363059 114 ntBASIC-1.68□□□□□ -2.68
PHRF1Q9P1Y6 RNU6-194P-201ENST00000363862 105 ntBASIC-1.68□□□□□ -2.68
PHRF1Q9P1Y6 RNU6-918P-201ENST00000391219 106 ntBASIC-1.68□□□□□ -2.68
PHRF1Q9P1Y6 SNORD58.1-201ENST00000391313 66 ntBASIC-1.68□□□□□ -2.68
PHRF1Q9P1Y6 SNORA18.5-201ENST00000516616 101 ntBASIC-1.68□□□□□ -2.68
PHRF1Q9P1Y6 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.68□□□□□ -2.68
PHRF1Q9P1Y6 MIR23C-201ENST00000579846 100 ntBASIC-1.68□□□□□ -2.68
PHRF1Q9P1Y6 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.68□□□□□ -2.68
PHRF1Q9P1Y6 MIR4795-201ENST00000584182 89 ntBASIC-1.68□□□□□ -2.68
PHRF1Q9P1Y6 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.69□□□□□ -2.68
PHRF1Q9P1Y6 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.69□□□□□ -2.68
PHRF1Q9P1Y6 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.69□□□□□ -2.68
PHRF1Q9P1Y6 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.69□□□□□ -2.68
PHRF1Q9P1Y6 RNU6-816P-201ENST00000390914 107 ntBASIC-1.69□□□□□ -2.68
PHRF1Q9P1Y6 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.69□□□□□ -2.68
PHRF1Q9P1Y6 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.69□□□□□ -2.68
PHRF1Q9P1Y6 SNORD127-201ENST00000458892 86 ntBASIC-1.69□□□□□ -2.68
PHRF1Q9P1Y6 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.69□□□□□ -2.68
PHRF1Q9P1Y6 MIR4680-201ENST00000580906 66 ntBASIC-1.69□□□□□ -2.68
PHRF1Q9P1Y6 AL160413.1-201ENST00000622780 310 ntBASIC-1.69□□□□□ -2.68
PHRF1Q9P1Y6 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.7□□□□□ -2.68
PHRF1Q9P1Y6 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.7□□□□□ -2.68
PHRF1Q9P1Y6 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.7□□□□□ -2.68
PHRF1Q9P1Y6 AL021921.1-201ENST00000442774 93 ntBASIC-1.7□□□□□ -2.68
PHRF1Q9P1Y6 AL118496.2-201ENST00000448300 230 ntBASIC-1.7□□□□□ -2.68
PHRF1Q9P1Y6 MIR8062-201ENST00000621515 85 ntBASIC-1.7□□□□□ -2.68
PHRF1Q9P1Y6 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.71□□□□□ -2.68
PHRF1Q9P1Y6 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.71□□□□□ -2.68
PHRF1Q9P1Y6 RNU6-681P-201ENST00000364012 104 ntBASIC-1.71□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 255.1 ms