Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.3□□□□□ -2.62
VCX3AQ9NNX9 MIR1255B2-201ENST00000408618 67 ntBASIC-1.3□□□□□ -2.62
VCX3AQ9NNX9 RNA5SP147-201ENST00000516493 109 ntBASIC-1.3□□□□□ -2.62
VCX3AQ9NNX9 MIR548X2-201ENST00000579776 100 ntBASIC-1.3□□□□□ -2.62
VCX3AQ9NNX9 MIR548Z-201ENST00000584743 97 ntBASIC-1.3□□□□□ -2.62
VCX3AQ9NNX9 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.3□□□□□ -2.62
VCX3AQ9NNX9 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.31□□□□□ -2.62
VCX3AQ9NNX9 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.31□□□□□ -2.62
VCX3AQ9NNX9 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.31□□□□□ -2.62
VCX3AQ9NNX9 RNU6-260P-201ENST00000384092 107 ntBASIC-1.31□□□□□ -2.62
VCX3AQ9NNX9 RNU6-519P-201ENST00000410590 108 ntBASIC-1.31□□□□□ -2.62
VCX3AQ9NNX9 MIR4306-201ENST00000583390 91 ntBASIC-1.31□□□□□ -2.62
VCX3AQ9NNX9 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.31□□□□□ -2.62
VCX3AQ9NNX9 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.31□□□□□ -2.62
VCX3AQ9NNX9 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.31□□□□□ -2.62
VCX3AQ9NNX9 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.31□□□□□ -2.62
VCX3AQ9NNX9 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.31□□□□□ -2.62
VCX3AQ9NNX9 AC132825.6-201ENST00000638861 357 ntBASIC-1.31□□□□□ -2.62
VCX3AQ9NNX9 RNU6-924P-201ENST00000362926 108 ntBASIC-1.32□□□□□ -2.62
VCX3AQ9NNX9 SNORA2.1-201ENST00000363089 137 ntBASIC-1.32□□□□□ -2.62
VCX3AQ9NNX9 SNORA63-201ENST00000363450 132 ntBASIC-1.32□□□□□ -2.62
VCX3AQ9NNX9 SNORD114-15-201ENST00000364687 72 ntBASIC-1.32□□□□□ -2.62
VCX3AQ9NNX9 MIR548I1-201ENST00000408810 149 ntBASIC-1.32□□□□□ -2.62
VCX3AQ9NNX9 MTATP6P29-201ENST00000415057 132 ntBASIC-1.32□□□□□ -2.62
VCX3AQ9NNX9 AL118496.2-201ENST00000448300 230 ntBASIC-1.32□□□□□ -2.62
VCX3AQ9NNX9 MIR4679-2-201ENST00000578358 77 ntBASIC-1.32□□□□□ -2.62
VCX3AQ9NNX9 MIR4773-1-201ENST00000637203 78 ntBASIC-1.32□□□□□ -2.62
VCX3AQ9NNX9 RNU5F-1-201ENST00000362507 117 ntBASIC-1.33□□□□□ -2.62
VCX3AQ9NNX9 RNU6-824P-201ENST00000363724 104 ntBASIC-1.33□□□□□ -2.62
VCX3AQ9NNX9 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.33□□□□□ -2.62
VCX3AQ9NNX9 RNU6-746P-201ENST00000384112 109 ntBASIC-1.33□□□□□ -2.62
VCX3AQ9NNX9 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.33□□□□□ -2.62
VCX3AQ9NNX9 RNU6-24P-201ENST00000384440 107 ntBASIC-1.33□□□□□ -2.62
VCX3AQ9NNX9 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.33□□□□□ -2.62
VCX3AQ9NNX9 MIR203A-201ENST00000384836 110 ntBASIC-1.33□□□□□ -2.62
VCX3AQ9NNX9 MIR29B1-201ENST00000385015 81 ntBASIC-1.33□□□□□ -2.62
VCX3AQ9NNX9 MIR569-201ENST00000385228 96 ntBASIC-1.33□□□□□ -2.62
VCX3AQ9NNX9 SNORA26.4-201ENST00000391188 123 ntBASIC-1.33□□□□□ -2.62
VCX3AQ9NNX9 MTND3P2-201ENST00000438452 342 ntBASIC-1.33□□□□□ -2.62
VCX3AQ9NNX9 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.33□□□□□ -2.62
VCX3AQ9NNX9 SNORA18.5-201ENST00000516616 101 ntBASIC-1.33□□□□□ -2.62
VCX3AQ9NNX9 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.33□□□□□ -2.62
VCX3AQ9NNX9 AP001094.1-201ENST00000579805 193 ntBASIC-1.33□□□□□ -2.62
VCX3AQ9NNX9 MIR6509-201ENST00000614603 85 ntBASIC-1.33□□□□□ -2.62
VCX3AQ9NNX9 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.33□□□□□ -2.62
VCX3AQ9NNX9 RNU6-479P-201ENST00000516348 105 ntBASIC-1.34□□□□□ -2.62
VCX3AQ9NNX9 MIR3657-201ENST00000584818 117 ntBASIC-1.34□□□□□ -2.62
VCX3AQ9NNX9 SNORD115-33-201ENST00000363723 82 ntBASIC-1.35□□□□□ -2.63
VCX3AQ9NNX9 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.35□□□□□ -2.63
VCX3AQ9NNX9 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.35□□□□□ -2.63
VCX3AQ9NNX9 SNORD63.1-201ENST00000516178 80 ntBASIC-1.35□□□□□ -2.63
VCX3AQ9NNX9 CYP3A54P-201ENST00000566950 75 ntBASIC-1.35□□□□□ -2.63
VCX3AQ9NNX9 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.36□□□□□ -2.63
VCX3AQ9NNX9 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.36□□□□□ -2.63
VCX3AQ9NNX9 RNU6-772P-201ENST00000516042 105 ntBASIC-1.36□□□□□ -2.63
VCX3AQ9NNX9 RNU7-154P-201ENST00000516194 62 ntBASIC-1.36□□□□□ -2.63
VCX3AQ9NNX9 RNU6-35P-201ENST00000384530 107 ntBASIC-1.37□□□□□ -2.63
VCX3AQ9NNX9 RNU6-394P-201ENST00000410735 107 ntBASIC-1.37□□□□□ -2.63
VCX3AQ9NNX9 RNU7-134P-201ENST00000458997 64 ntBASIC-1.37□□□□□ -2.63
VCX3AQ9NNX9 MIR6818-201ENST00000621576 65 ntBASIC-1.37□□□□□ -2.63
VCX3AQ9NNX9 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.38□□□□□ -2.63
VCX3AQ9NNX9 AL691482.2-201ENST00000457453 84 ntBASIC-1.38□□□□□ -2.63
VCX3AQ9NNX9 MIR4777-201ENST00000583710 86 ntBASIC-1.38□□□□□ -2.63
VCX3AQ9NNX9 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.38□□□□□ -2.63
VCX3AQ9NNX9 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.39□□□□□ -2.63
VCX3AQ9NNX9 RNU6-200P-201ENST00000364743 107 ntBASIC-1.39□□□□□ -2.63
VCX3AQ9NNX9 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.39□□□□□ -2.63
VCX3AQ9NNX9 RNU6-576P-201ENST00000390854 102 ntBASIC-1.39□□□□□ -2.63
VCX3AQ9NNX9 RNU4-61P-201ENST00000411243 107 ntBASIC-1.39□□□□□ -2.63
VCX3AQ9NNX9 MIR5009-201ENST00000578736 100 ntBASIC-1.39□□□□□ -2.63
VCX3AQ9NNX9 U6.81-201ENST00000612550 106 ntBASIC-1.39□□□□□ -2.63
VCX3AQ9NNX9 AL157777.2-201ENST00000258070 137 ntBASIC-1.4□□□□□ -2.63
VCX3AQ9NNX9 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.4□□□□□ -2.63
VCX3AQ9NNX9 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.4□□□□□ -2.63
VCX3AQ9NNX9 RNU4-32P-201ENST00000363404 141 ntBASIC-1.4□□□□□ -2.63
VCX3AQ9NNX9 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.4□□□□□ -2.63
VCX3AQ9NNX9 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.4□□□□□ -2.63
VCX3AQ9NNX9 RNU6-804P-201ENST00000384286 107 ntBASIC-1.4□□□□□ -2.63
VCX3AQ9NNX9 RNA5SP272-201ENST00000516095 111 ntBASIC-1.4□□□□□ -2.63
VCX3AQ9NNX9 MIR4503-201ENST00000582187 83 ntBASIC-1.4□□□□□ -2.63
VCX3AQ9NNX9 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.41□□□□□ -2.64
VCX3AQ9NNX9 SNORD115-22-201ENST00000364456 82 ntBASIC-1.41□□□□□ -2.64
VCX3AQ9NNX9 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.41□□□□□ -2.64
VCX3AQ9NNX9 MIR521-2-201ENST00000384818 87 ntBASIC-1.41□□□□□ -2.64
VCX3AQ9NNX9 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.41□□□□□ -2.64
VCX3AQ9NNX9 RNU6-795P-201ENST00000516323 103 ntBASIC-1.41□□□□□ -2.64
VCX3AQ9NNX9 RNU6-426P-201ENST00000516464 97 ntBASIC-1.41□□□□□ -2.64
VCX3AQ9NNX9 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.41□□□□□ -2.64
VCX3AQ9NNX9 MIR6738-201ENST00000619620 64 ntBASIC-1.41□□□□□ -2.64
VCX3AQ9NNX9 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.42□□□□□ -2.64
VCX3AQ9NNX9 AL353691.2-201ENST00000443795 59 ntBASIC-1.42□□□□□ -2.64
VCX3AQ9NNX9 RNU6-327P-201ENST00000516270 127 ntBASIC-1.42□□□□□ -2.64
VCX3AQ9NNX9 RNU6-706P-201ENST00000517229 104 ntBASIC-1.42□□□□□ -2.64
VCX3AQ9NNX9 MIR3144-201ENST00000579460 79 ntBASIC-1.42□□□□□ -2.64
VCX3AQ9NNX9 MIR4324-201ENST00000584846 72 ntBASIC-1.42□□□□□ -2.64
VCX3AQ9NNX9 AC012531.4-201ENST00000616509 177 ntBASIC-1.42□□□□□ -2.64
VCX3AQ9NNX9 RNU6-196P-201ENST00000384315 107 ntBASIC-1.43□□□□□ -2.64
VCX3AQ9NNX9 MIR527-201ENST00000385244 85 ntBASIC-1.43□□□□□ -2.64
VCX3AQ9NNX9 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.43□□□□□ -2.64
VCX3AQ9NNX9 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 455.8 ms