Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MIR3657-201ENST00000584818 117 ntBASIC-1.4□□□□□ -2.63
LRRC40Q9H9A6 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.41□□□□□ -2.64
LRRC40Q9H9A6 SNX3P1X-201ENST00000414887 175 ntBASIC-1.41□□□□□ -2.64
LRRC40Q9H9A6 AL158147.1-201ENST00000443970 75 ntBASIC-1.41□□□□□ -2.64
LRRC40Q9H9A6 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.41□□□□□ -2.64
LRRC40Q9H9A6 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.41□□□□□ -2.64
LRRC40Q9H9A6 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.41□□□□□ -2.64
LRRC40Q9H9A6 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.41□□□□□ -2.64
LRRC40Q9H9A6 AL035470.1-201ENST00000622571 220 ntBASIC-1.41□□□□□ -2.64
LRRC40Q9H9A6 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.41□□□□□ -2.64
LRRC40Q9H9A6 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.42□□□□□ -2.64
LRRC40Q9H9A6 RNU6-924P-201ENST00000362926 108 ntBASIC-1.42□□□□□ -2.64
LRRC40Q9H9A6 RNY4P6-201ENST00000363667 96 ntBASIC-1.42□□□□□ -2.64
LRRC40Q9H9A6 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.42□□□□□ -2.64
LRRC40Q9H9A6 MIR889-201ENST00000401280 79 ntBASIC-1.42□□□□□ -2.64
LRRC40Q9H9A6 HLA-S-202ENST00000425174 53 ntBASIC-1.42□□□□□ -2.64
LRRC40Q9H9A6 AP002795.1-201ENST00000534879 84 ntBASIC-1.42□□□□□ -2.64
LRRC40Q9H9A6 MIR548AG1-201ENST00000579932 66 ntBASIC-1.42□□□□□ -2.64
LRRC40Q9H9A6 AC138207.3-201ENST00000585289 166 ntBASIC-1.42□□□□□ -2.64
LRRC40Q9H9A6 AC103810.7-201ENST00000607821 91 ntBASIC-1.42□□□□□ -2.64
LRRC40Q9H9A6 SNORA2.1-201ENST00000363089 137 ntBASIC-1.43□□□□□ -2.64
LRRC40Q9H9A6 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.43□□□□□ -2.64
LRRC40Q9H9A6 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.43□□□□□ -2.64
LRRC40Q9H9A6 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.43□□□□□ -2.64
LRRC40Q9H9A6 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.43□□□□□ -2.64
LRRC40Q9H9A6 MIR527-201ENST00000385244 85 ntBASIC-1.43□□□□□ -2.64
LRRC40Q9H9A6 AL117187.1-201ENST00000555482 181 ntBASIC-1.43□□□□□ -2.64
LRRC40Q9H9A6 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.43□□□□□ -2.64
LRRC40Q9H9A6 MIR4773-1-201ENST00000637203 78 ntBASIC-1.43□□□□□ -2.64
LRRC40Q9H9A6 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.44□□□□□ -2.64
LRRC40Q9H9A6 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.44□□□□□ -2.64
LRRC40Q9H9A6 MIR519A2-201ENST00000384990 87 ntBASIC-1.44□□□□□ -2.64
LRRC40Q9H9A6 RNU6-644P-201ENST00000391155 98 ntBASIC-1.44□□□□□ -2.64
LRRC40Q9H9A6 RNU6-62P-201ENST00000516526 102 ntBASIC-1.44□□□□□ -2.64
LRRC40Q9H9A6 SNORA18.5-201ENST00000516616 101 ntBASIC-1.44□□□□□ -2.64
LRRC40Q9H9A6 MIR548Z-201ENST00000584743 97 ntBASIC-1.44□□□□□ -2.64
LRRC40Q9H9A6 MIR6509-201ENST00000614603 85 ntBASIC-1.44□□□□□ -2.64
LRRC40Q9H9A6 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.45□□□□□ -2.64
LRRC40Q9H9A6 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.45□□□□□ -2.64
LRRC40Q9H9A6 RNY3P2-201ENST00000362918 102 ntBASIC-1.45□□□□□ -2.64
LRRC40Q9H9A6 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.45□□□□□ -2.64
LRRC40Q9H9A6 RNA5SP331-201ENST00000364986 107 ntBASIC-1.45□□□□□ -2.64
LRRC40Q9H9A6 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.45□□□□□ -2.64
LRRC40Q9H9A6 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.45□□□□□ -2.64
LRRC40Q9H9A6 AC006254.2-201ENST00000603259 279 ntBASIC-1.45□□□□□ -2.64
LRRC40Q9H9A6 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.46□□□□□ -2.64
LRRC40Q9H9A6 SNORD58C-201ENST00000365223 64 ntBASIC-1.46□□□□□ -2.64
LRRC40Q9H9A6 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.46□□□□□ -2.64
LRRC40Q9H9A6 RNU6-576P-201ENST00000390854 102 ntBASIC-1.46□□□□□ -2.64
LRRC40Q9H9A6 MIR548I1-201ENST00000408810 149 ntBASIC-1.46□□□□□ -2.64
LRRC40Q9H9A6 AP001340.1-201ENST00000624405 217 ntBASIC-1.46□□□□□ -2.64
LRRC40Q9H9A6 AC091912.2-201ENST00000624798 167 ntBASIC-1.46□□□□□ -2.64
LRRC40Q9H9A6 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.47□□□□□ -2.64
LRRC40Q9H9A6 RNU6-774P-201ENST00000363238 107 ntBASIC-1.47□□□□□ -2.64
LRRC40Q9H9A6 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.47□□□□□ -2.64
LRRC40Q9H9A6 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.47□□□□□ -2.64
LRRC40Q9H9A6 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.47□□□□□ -2.64
LRRC40Q9H9A6 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.47□□□□□ -2.64
LRRC40Q9H9A6 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.47□□□□□ -2.64
LRRC40Q9H9A6 RNU4-61P-201ENST00000411243 107 ntBASIC-1.47□□□□□ -2.64
LRRC40Q9H9A6 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.47□□□□□ -2.64
LRRC40Q9H9A6 MTND3P2-201ENST00000438452 342 ntBASIC-1.47□□□□□ -2.64
LRRC40Q9H9A6 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.47□□□□□ -2.64
LRRC40Q9H9A6 RNU7-154P-201ENST00000516194 62 ntBASIC-1.47□□□□□ -2.64
LRRC40Q9H9A6 AC025166.1-201ENST00000612411 163 ntBASIC-1.47□□□□□ -2.64
LRRC40Q9H9A6 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.47□□□□□ -2.64
LRRC40Q9H9A6 MIR6874-201ENST00000635894 71 ntBASIC-1.47□□□□□ -2.64
LRRC40Q9H9A6 RNU6-226P-201ENST00000363778 107 ntBASIC-1.48□□□□□ -2.65
LRRC40Q9H9A6 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.48□□□□□ -2.65
LRRC40Q9H9A6 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.48□□□□□ -2.65
LRRC40Q9H9A6 RNU6-813P-201ENST00000384691 107 ntBASIC-1.48□□□□□ -2.65
LRRC40Q9H9A6 MIR568-201ENST00000385036 95 ntBASIC-1.48□□□□□ -2.65
LRRC40Q9H9A6 SNORD19-201ENST00000391191 68 ntBASIC-1.48□□□□□ -2.65
LRRC40Q9H9A6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.48□□□□□ -2.65
LRRC40Q9H9A6 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.48□□□□□ -2.65
LRRC40Q9H9A6 MIR4439-201ENST00000583746 80 ntBASIC-1.48□□□□□ -2.65
LRRC40Q9H9A6 AC072026.1-201ENST00000605023 201 ntBASIC-1.48□□□□□ -2.65
LRRC40Q9H9A6 AL627230.5-201ENST00000619807 58 ntBASIC-1.48□□□□□ -2.65
LRRC40Q9H9A6 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.49□□□□□ -2.65
LRRC40Q9H9A6 MIR5591-201ENST00000578248 65 ntBASIC-1.49□□□□□ -2.65
LRRC40Q9H9A6 MIR4777-201ENST00000583710 86 ntBASIC-1.49□□□□□ -2.65
LRRC40Q9H9A6 RNU6-682P-201ENST00000363843 106 ntBASIC-1.5□□□□□ -2.65
LRRC40Q9H9A6 RNU6-80P-201ENST00000384195 107 ntBASIC-1.5□□□□□ -2.65
LRRC40Q9H9A6 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.5□□□□□ -2.65
LRRC40Q9H9A6 RNU6-246P-201ENST00000384702 107 ntBASIC-1.5□□□□□ -2.65
LRRC40Q9H9A6 MIR521-2-201ENST00000384818 87 ntBASIC-1.5□□□□□ -2.65
LRRC40Q9H9A6 MIR507-201ENST00000385234 94 ntBASIC-1.5□□□□□ -2.65
LRRC40Q9H9A6 RNU6-519P-201ENST00000410590 108 ntBASIC-1.5□□□□□ -2.65
LRRC40Q9H9A6 AL353691.2-201ENST00000443795 59 ntBASIC-1.5□□□□□ -2.65
LRRC40Q9H9A6 RNU6-732P-201ENST00000516033 103 ntBASIC-1.5□□□□□ -2.65
LRRC40Q9H9A6 RNA5SP180-201ENST00000516181 101 ntBASIC-1.5□□□□□ -2.65
LRRC40Q9H9A6 RNU6-861P-201ENST00000516745 106 ntBASIC-1.5□□□□□ -2.65
LRRC40Q9H9A6 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.5□□□□□ -2.65
LRRC40Q9H9A6 U6.81-201ENST00000612550 106 ntBASIC-1.5□□□□□ -2.65
LRRC40Q9H9A6 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.5□□□□□ -2.65
LRRC40Q9H9A6 MIR6502-201ENST00000617296 76 ntBASIC-1.5□□□□□ -2.65
LRRC40Q9H9A6 RNU6-867P-201ENST00000364956 107 ntBASIC-1.51□□□□□ -2.65
LRRC40Q9H9A6 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.51□□□□□ -2.65
LRRC40Q9H9A6 MIR601-201ENST00000385256 79 ntBASIC-1.51□□□□□ -2.65
LRRC40Q9H9A6 SNORA19.1-201ENST00000410656 129 ntBASIC-1.51□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 247.8 ms