Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 MIR520F-201ENST00000384824 87 ntBASIC1.43□□□□□ -2.18
CNTNAP4Q9C0A0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.43□□□□□ -2.18
CNTNAP4Q9C0A0 FABP5P4-201ENST00000437203 171 ntBASIC1.43□□□□□ -2.18
CNTNAP4Q9C0A0 RNU6-1110P-201ENST00000516462 101 ntBASIC1.43□□□□□ -2.18
CNTNAP4Q9C0A0 SNORA31.14-201ENST00000516728 116 ntBASIC1.43□□□□□ -2.18
CNTNAP4Q9C0A0 MIR548O2-201ENST00000616090 70 ntBASIC1.43□□□□□ -2.18
CNTNAP4Q9C0A0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
CNTNAP4Q9C0A0 SNORA25-201ENST00000384384 134 ntBASIC1.42□□□□□ -2.18
CNTNAP4Q9C0A0 SNORA75.1-201ENST00000391130 148 ntBASIC1.42□□□□□ -2.18
CNTNAP4Q9C0A0 MTND4LP1-201ENST00000446263 157 ntBASIC1.42□□□□□ -2.18
CNTNAP4Q9C0A0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
CNTNAP4Q9C0A0 MIR373-201ENST00000362273 69 ntBASIC1.41□□□□□ -2.18
CNTNAP4Q9C0A0 MIR519E-201ENST00000385075 84 ntBASIC1.41□□□□□ -2.18
CNTNAP4Q9C0A0 RNA5SP299-201ENST00000391203 116 ntBASIC1.41□□□□□ -2.18
CNTNAP4Q9C0A0 U7.7-201ENST00000459276 60 ntBASIC1.41□□□□□ -2.18
CNTNAP4Q9C0A0 RNU7-13P-201ENST00000516413 62 ntBASIC1.41□□□□□ -2.18
CNTNAP4Q9C0A0 RNU6-656P-201ENST00000516785 107 ntBASIC1.41□□□□□ -2.18
CNTNAP4Q9C0A0 RNU6-990P-201ENST00000364385 104 ntBASIC1.4□□□□□ -2.18
CNTNAP4Q9C0A0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
CNTNAP4Q9C0A0 MIR7974-201ENST00000615835 79 ntBASIC1.4□□□□□ -2.18
CNTNAP4Q9C0A0 RNU6-940P-201ENST00000363433 104 ntBASIC1.4□□□□□ -2.19
CNTNAP4Q9C0A0 RNA5SP62-201ENST00000363457 110 ntBASIC1.4□□□□□ -2.19
CNTNAP4Q9C0A0 SNORD115-24-201ENST00000363528 82 ntBASIC1.4□□□□□ -2.19
CNTNAP4Q9C0A0 MIR617-201ENST00000385030 97 ntBASIC1.4□□□□□ -2.19
CNTNAP4Q9C0A0 Y_RNA.722-201ENST00000517279 114 ntBASIC1.4□□□□□ -2.19
CNTNAP4Q9C0A0 AL590095.2-201ENST00000604136 117 ntBASIC1.4□□□□□ -2.19
CNTNAP4Q9C0A0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CNTNAP4Q9C0A0 RNA5SP117-201ENST00000365294 118 ntBASIC1.39□□□□□ -2.19
CNTNAP4Q9C0A0 RNU6-936P-201ENST00000384005 107 ntBASIC1.39□□□□□ -2.19
CNTNAP4Q9C0A0 RNU6-260P-201ENST00000384092 107 ntBASIC1.39□□□□□ -2.19
CNTNAP4Q9C0A0 MIR19B1-201ENST00000384829 87 ntBASIC1.39□□□□□ -2.19
CNTNAP4Q9C0A0 MIR200A-201ENST00000384875 90 ntBASIC1.39□□□□□ -2.19
CNTNAP4Q9C0A0 RNA5SP257-201ENST00000363023 116 ntBASIC1.38□□□□□ -2.19
CNTNAP4Q9C0A0 RNU6-122P-201ENST00000516818 107 ntBASIC1.38□□□□□ -2.19
CNTNAP4Q9C0A0 RNU6V-201ENST00000384105 107 ntBASIC1.37□□□□□ -2.19
CNTNAP4Q9C0A0 RNU6-1184P-201ENST00000384588 108 ntBASIC1.37□□□□□ -2.19
CNTNAP4Q9C0A0 AC002350.1-201ENST00000490759 375 ntBASIC1.37□□□□□ -2.19
CNTNAP4Q9C0A0 RNA5SP147-201ENST00000516493 109 ntBASIC1.37□□□□□ -2.19
CNTNAP4Q9C0A0 RNU7-104P-201ENST00000459398 79 ntBASIC1.36□□□□□ -2.19
CNTNAP4Q9C0A0 RNA5SP121-201ENST00000516537 101 ntBASIC1.36□□□□□ -2.19
CNTNAP4Q9C0A0 MIR3938-201ENST00000582157 103 ntBASIC1.36□□□□□ -2.19
CNTNAP4Q9C0A0 AC211469.2-201ENST00000605461 205 ntBASIC1.36□□□□□ -2.19
CNTNAP4Q9C0A0 MIR6739-201ENST00000622461 75 ntBASIC1.36□□□□□ -2.19
CNTNAP4Q9C0A0 SNORD60.1-201ENST00000362451 73 ntBASIC1.35□□□□□ -2.19
CNTNAP4Q9C0A0 SNORA2.1-201ENST00000363089 137 ntBASIC1.35□□□□□ -2.19
CNTNAP4Q9C0A0 RNU7-74P-201ENST00000459104 62 ntBASIC1.35□□□□□ -2.19
CNTNAP4Q9C0A0 RNU6-1089P-201ENST00000516473 104 ntBASIC1.35□□□□□ -2.19
CNTNAP4Q9C0A0 RNA5SP330-201ENST00000517096 96 ntBASIC1.35□□□□□ -2.19
CNTNAP4Q9C0A0 AC025627.3-201ENST00000582078 182 ntBASIC1.35□□□□□ -2.19
CNTNAP4Q9C0A0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CNTNAP4Q9C0A0 RNA5SP327-201ENST00000362494 101 ntBASIC1.34□□□□□ -2.2
CNTNAP4Q9C0A0 SNORD105-201ENST00000386910 85 ntBASIC1.34□□□□□ -2.2
CNTNAP4Q9C0A0 RPS29P23-201ENST00000458635 123 ntBASIC1.34□□□□□ -2.2
CNTNAP4Q9C0A0 AC067863.3-201ENST00000624172 122 ntBASIC1.34□□□□□ -2.2
CNTNAP4Q9C0A0 RNA5SP215-201ENST00000363440 122 ntBASIC1.33□□□□□ -2.2
CNTNAP4Q9C0A0 RNU6-469P-201ENST00000516253 101 ntBASIC1.33□□□□□ -2.2
CNTNAP4Q9C0A0 MIR4639-201ENST00000584938 69 ntBASIC1.33□□□□□ -2.2
CNTNAP4Q9C0A0 RNU6-92P-201ENST00000605893 104 ntBASIC1.33□□□□□ -2.2
CNTNAP4Q9C0A0 SNORD26-201ENST00000384147 75 ntBASIC1.32□□□□□ -2.2
CNTNAP4Q9C0A0 RNU6-35P-201ENST00000384530 107 ntBASIC1.32□□□□□ -2.2
CNTNAP4Q9C0A0 MIR548V-201ENST00000584165 80 ntBASIC1.32□□□□□ -2.2
CNTNAP4Q9C0A0 SNORD114-21-201ENST00000606412 72 ntBASIC1.32□□□□□ -2.2
CNTNAP4Q9C0A0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CNTNAP4Q9C0A0 MIR644A-201ENST00000385262 94 ntBASIC1.31□□□□□ -2.2
CNTNAP4Q9C0A0 SNORD89-201ENST00000390981 114 ntBASIC1.31□□□□□ -2.2
CNTNAP4Q9C0A0 RNU6-808P-201ENST00000391233 108 ntBASIC1.31□□□□□ -2.2
CNTNAP4Q9C0A0 AL157398.1-201ENST00000452981 186 ntBASIC1.31□□□□□ -2.2
CNTNAP4Q9C0A0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CNTNAP4Q9C0A0 RNU4-38P-201ENST00000364472 129 ntBASIC1.3□□□□□ -2.2
CNTNAP4Q9C0A0 MIR630-201ENST00000384957 97 ntBASIC1.3□□□□□ -2.2
CNTNAP4Q9C0A0 MIR532-201ENST00000385025 91 ntBASIC1.3□□□□□ -2.2
CNTNAP4Q9C0A0 MT-TY-201ENST00000387409 66 ntBASIC1.3□□□□□ -2.2
CNTNAP4Q9C0A0 SNORD41.1-201ENST00000391000 69 ntBASIC1.3□□□□□ -2.2
CNTNAP4Q9C0A0 RNU6-955P-201ENST00000410497 104 ntBASIC1.3□□□□□ -2.2
CNTNAP4Q9C0A0 MIR924-201ENST00000638017 53 ntBASIC1.3□□□□□ -2.2
CNTNAP4Q9C0A0 RNU6-1312P-201ENST00000362425 108 ntBASIC1.29□□□□□ -2.2
CNTNAP4Q9C0A0 RNU6-1335P-201ENST00000365426 107 ntBASIC1.29□□□□□ -2.2
CNTNAP4Q9C0A0 snoU13.13-201ENST00000458842 104 ntBASIC1.29□□□□□ -2.2
CNTNAP4Q9C0A0 RNU1-124P-201ENST00000363861 145 ntBASIC1.28□□□□□ -2.2
CNTNAP4Q9C0A0 SNORD28-201ENST00000384706 75 ntBASIC1.28□□□□□ -2.2
CNTNAP4Q9C0A0 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
CNTNAP4Q9C0A0 RNU4-88P-201ENST00000411220 86 ntBASIC1.28□□□□□ -2.2
CNTNAP4Q9C0A0 CYP3A137P-201ENST00000562436 69 ntBASIC1.28□□□□□ -2.2
CNTNAP4Q9C0A0 MIR3973-201ENST00000579824 107 ntBASIC1.28□□□□□ -2.2
CNTNAP4Q9C0A0 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.28□□□□□ -2.2
CNTNAP4Q9C0A0 MIR6857-201ENST00000613267 93 ntBASIC1.28□□□□□ -2.2
CNTNAP4Q9C0A0 U4.4-201ENST00000620626 117 ntBASIC1.28□□□□□ -2.2
CNTNAP4Q9C0A0 SNORD114-24-201ENST00000365029 72 ntBASIC1.27□□□□□ -2.21
CNTNAP4Q9C0A0 AC018659.1-201ENST00000551083 169 ntBASIC1.27□□□□□ -2.21
CNTNAP4Q9C0A0 AC244669.1-204ENST00000621564 178 ntBASIC1.27□□□□□ -2.21
CNTNAP4Q9C0A0 RNU7-174P-201ENST00000516248 59 ntBASIC1.26□□□□□ -2.21
CNTNAP4Q9C0A0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.26□□□□□ -2.21
CNTNAP4Q9C0A0 MIR548AD-201ENST00000584780 82 ntBASIC1.26□□□□□ -2.21
CNTNAP4Q9C0A0 U2.7-201ENST00000619197 100 ntBASIC1.26□□□□□ -2.21
CNTNAP4Q9C0A0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CNTNAP4Q9C0A0 MIR6086-201ENST00000638065 55 ntBASIC1.25□□□□□ -2.21
CNTNAP4Q9C0A0 RNU1-141P-201ENST00000364623 158 ntBASIC1.24□□□□□ -2.21
CNTNAP4Q9C0A0 RNU6-726P-201ENST00000364680 107 ntBASIC1.24□□□□□ -2.21
CNTNAP4Q9C0A0 SNORA25.8-201ENST00000364831 128 ntBASIC1.24□□□□□ -2.21
CNTNAP4Q9C0A0 RNU4-45P-201ENST00000365469 141 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms