Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 MIR494-201ENST00000349529 81 ntBASIC0.13□□□□□ -2.39
ZIM3Q96PE6 SNORD73B-201ENST00000364394 72 ntBASIC0.13□□□□□ -2.39
ZIM3Q96PE6 RNU6-382P-201ENST00000365181 106 ntBASIC0.13□□□□□ -2.39
ZIM3Q96PE6 Y_RNA.611-201ENST00000410682 108 ntBASIC0.13□□□□□ -2.39
ZIM3Q96PE6 RNU7-24P-201ENST00000458867 62 ntBASIC0.13□□□□□ -2.39
ZIM3Q96PE6 AC097510.1-201ENST00000510945 133 ntBASIC0.13□□□□□ -2.39
ZIM3Q96PE6 RNU7-129P-201ENST00000516128 62 ntBASIC0.13□□□□□ -2.39
ZIM3Q96PE6 RNU6-1057P-201ENST00000517162 102 ntBASIC0.13□□□□□ -2.39
ZIM3Q96PE6 AC145423.2-201ENST00000610631 239 ntBASIC0.13□□□□□ -2.39
ZIM3Q96PE6 SNORD114-9-201ENST00000364370 72 ntBASIC0.12□□□□□ -2.39
ZIM3Q96PE6 Y_RNA.388-201ENST00000383919 113 ntBASIC0.12□□□□□ -2.39
ZIM3Q96PE6 Y_RNA.407-201ENST00000383986 113 ntBASIC0.12□□□□□ -2.39
ZIM3Q96PE6 RNU6-1152P-201ENST00000384576 107 ntBASIC0.12□□□□□ -2.39
ZIM3Q96PE6 MIR216B-201ENST00000390186 82 ntBASIC0.12□□□□□ -2.39
ZIM3Q96PE6 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
ZIM3Q96PE6 SNORD75.2-201ENST00000408784 58 ntBASIC0.12□□□□□ -2.39
ZIM3Q96PE6 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.12□□□□□ -2.39
ZIM3Q96PE6 RNU7-171P-201ENST00000459581 62 ntBASIC0.12□□□□□ -2.39
ZIM3Q96PE6 AC022137.1-201ENST00000483735 151 ntBASIC0.12□□□□□ -2.39
ZIM3Q96PE6 RNA5SP436-201ENST00000516020 115 ntBASIC0.12□□□□□ -2.39
ZIM3Q96PE6 RNU7-188P-201ENST00000517063 64 ntBASIC0.12□□□□□ -2.39
ZIM3Q96PE6 RNU6-990P-201ENST00000364385 104 ntBASIC0.11□□□□□ -2.39
ZIM3Q96PE6 MIR516B1-201ENST00000385211 90 ntBASIC0.11□□□□□ -2.39
ZIM3Q96PE6 MIR643-201ENST00000385267 97 ntBASIC0.11□□□□□ -2.39
ZIM3Q96PE6 MIR548E-201ENST00000408287 88 ntBASIC0.11□□□□□ -2.39
ZIM3Q96PE6 Y_RNA.606-201ENST00000410579 103 ntBASIC0.11□□□□□ -2.39
ZIM3Q96PE6 RNU6-557P-201ENST00000516842 110 ntBASIC0.11□□□□□ -2.39
ZIM3Q96PE6 AC104408.1-201ENST00000605241 170 ntBASIC0.11□□□□□ -2.39
ZIM3Q96PE6 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.11□□□□□ -2.39
ZIM3Q96PE6 RNU6-42P-201ENST00000384165 107 ntBASIC0.1□□□□□ -2.39
ZIM3Q96PE6 RNU6-154P-201ENST00000384306 106 ntBASIC0.1□□□□□ -2.39
ZIM3Q96PE6 MIR450A2-201ENST00000385022 100 ntBASIC0.1□□□□□ -2.39
ZIM3Q96PE6 SCARNA11.2-201ENST00000517183 154 ntBASIC0.1□□□□□ -2.39
ZIM3Q96PE6 RNA5SP214-201ENST00000363378 118 ntBASIC0.09□□□□□ -2.4
ZIM3Q96PE6 RNY1P1-201ENST00000364372 112 ntBASIC0.09□□□□□ -2.4
ZIM3Q96PE6 Y_RNA.607-201ENST00000410597 98 ntBASIC0.09□□□□□ -2.4
ZIM3Q96PE6 RNY4P29-201ENST00000410801 97 ntBASIC0.09□□□□□ -2.4
ZIM3Q96PE6 RNU6-1108P-201ENST00000516308 104 ntBASIC0.09□□□□□ -2.4
ZIM3Q96PE6 SCARNA17.3-201ENST00000516381 125 ntBASIC0.09□□□□□ -2.4
ZIM3Q96PE6 Y_RNA.676-201ENST00000516393 96 ntBASIC0.09□□□□□ -2.4
ZIM3Q96PE6 U7.6-201ENST00000610841 64 ntBASIC0.09□□□□□ -2.4
ZIM3Q96PE6 MIRLET7A1-201ENST00000362295 80 ntBASIC0.08□□□□□ -2.4
ZIM3Q96PE6 RNU6-208P-201ENST00000362431 107 ntBASIC0.08□□□□□ -2.4
ZIM3Q96PE6 RNU5F-1-201ENST00000362507 117 ntBASIC0.08□□□□□ -2.4
ZIM3Q96PE6 Y_RNA.94-201ENST00000363068 106 ntBASIC0.08□□□□□ -2.4
ZIM3Q96PE6 RNU6-340P-201ENST00000364005 107 ntBASIC0.08□□□□□ -2.4
ZIM3Q96PE6 Y_RNA.316-201ENST00000365118 111 ntBASIC0.08□□□□□ -2.4
ZIM3Q96PE6 SNORD77.2-201ENST00000391045 68 ntBASIC0.08□□□□□ -2.4
ZIM3Q96PE6 RNU6-180P-201ENST00000516697 61 ntBASIC0.08□□□□□ -2.4
ZIM3Q96PE6 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
ZIM3Q96PE6 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.08□□□□□ -2.4
ZIM3Q96PE6 RNY4P3-201ENST00000365254 95 ntBASIC0.07□□□□□ -2.4
ZIM3Q96PE6 MIR106A-201ENST00000384870 81 ntBASIC0.07□□□□□ -2.4
ZIM3Q96PE6 MIR145-201ENST00000384967 88 ntBASIC0.07□□□□□ -2.4
ZIM3Q96PE6 MIR4666B-201ENST00000578142 81 ntBASIC0.07□□□□□ -2.4
ZIM3Q96PE6 uc_338.10-201ENST00000621872 182 ntBASIC0.07□□□□□ -2.4
ZIM3Q96PE6 SNORD114-5-201ENST00000362928 70 ntBASIC0.06□□□□□ -2.4
ZIM3Q96PE6 RNU6-330P-201ENST00000363015 107 ntBASIC0.06□□□□□ -2.4
ZIM3Q96PE6 RNA5SP325-201ENST00000363756 130 ntBASIC0.06□□□□□ -2.4
ZIM3Q96PE6 RNU6-1039P-201ENST00000383931 107 ntBASIC0.06□□□□□ -2.4
ZIM3Q96PE6 Y_RNA.426-201ENST00000384068 113 ntBASIC0.06□□□□□ -2.4
ZIM3Q96PE6 MIR593-201ENST00000384856 100 ntBASIC0.06□□□□□ -2.4
ZIM3Q96PE6 AC074348.1-201ENST00000426503 132 ntBASIC0.06□□□□□ -2.4
ZIM3Q96PE6 MIR4290-201ENST00000583807 95 ntBASIC0.06□□□□□ -2.4
ZIM3Q96PE6 IGLL4P-201ENST00000614590 133 ntBASIC0.06□□□□□ -2.4
ZIM3Q96PE6 AC084368.1-201ENST00000620935 65 ntBASIC0.06□□□□□ -2.4
ZIM3Q96PE6 MIR924-201ENST00000638017 53 ntBASIC0.06□□□□□ -2.4
ZIM3Q96PE6 Y_RNA.12-201ENST00000362393 112 ntBASIC0.05□□□□□ -2.4
ZIM3Q96PE6 SNORD114-23-201ENST00000363536 72 ntBASIC0.05□□□□□ -2.4
ZIM3Q96PE6 SNORD115-37-201ENST00000363768 82 ntBASIC0.05□□□□□ -2.4
ZIM3Q96PE6 Y_RNA.219-201ENST00000364232 113 ntBASIC0.05□□□□□ -2.4
ZIM3Q96PE6 RNU6-1276P-201ENST00000365372 104 ntBASIC0.05□□□□□ -2.4
ZIM3Q96PE6 RNU6-820P-201ENST00000384273 107 ntBASIC0.05□□□□□ -2.4
ZIM3Q96PE6 RNU6-129P-201ENST00000391022 107 ntBASIC0.05□□□□□ -2.4
ZIM3Q96PE6 SNORA75.1-201ENST00000391130 148 ntBASIC0.05□□□□□ -2.4
ZIM3Q96PE6 MIR1287-201ENST00000408492 90 ntBASIC0.05□□□□□ -2.4
ZIM3Q96PE6 RNU7-165P-201ENST00000458864 60 ntBASIC0.05□□□□□ -2.4
ZIM3Q96PE6 Y_RNA.633-201ENST00000459107 95 ntBASIC0.05□□□□□ -2.4
ZIM3Q96PE6 MIR4712-201ENST00000583750 82 ntBASIC0.05□□□□□ -2.4
ZIM3Q96PE6 AC022709.1-201ENST00000615967 87 ntBASIC0.05□□□□□ -2.4
ZIM3Q96PE6 MIR4773-1-201ENST00000637203 78 ntBASIC0.05□□□□□ -2.4
ZIM3Q96PE6 MIR655-201ENST00000362159 97 ntBASIC0.04□□□□□ -2.4
ZIM3Q96PE6 RNU6-686P-201ENST00000364839 107 ntBASIC0.04□□□□□ -2.4
ZIM3Q96PE6 RNA5SP173-201ENST00000364857 136 ntBASIC0.04□□□□□ -2.4
ZIM3Q96PE6 Y_RNA.313-201ENST00000365095 103 ntBASIC0.04□□□□□ -2.4
ZIM3Q96PE6 Y_RNA.371-201ENST00000365591 113 ntBASIC0.04□□□□□ -2.4
ZIM3Q96PE6 RNU6-573P-201ENST00000383938 106 ntBASIC0.04□□□□□ -2.4
ZIM3Q96PE6 AC244090.1-201ENST00000441884 93 ntBASIC0.04□□□□□ -2.4
ZIM3Q96PE6 YWHAEP3-201ENST00000582767 121 ntBASIC0.04□□□□□ -2.4
ZIM3Q96PE6 MIR4743-201ENST00000584576 69 ntBASIC0.04□□□□□ -2.4
ZIM3Q96PE6 MIR6507-201ENST00000613630 70 ntBASIC0.04□□□□□ -2.4
ZIM3Q96PE6 Y_RNA.226-201ENST00000364337 114 ntBASIC0.03□□□□□ -2.4
ZIM3Q96PE6 SNORD114-29-201ENST00000364819 70 ntBASIC0.03□□□□□ -2.4
ZIM3Q96PE6 RNA5SP163-201ENST00000410304 99 ntBASIC0.03□□□□□ -2.4
ZIM3Q96PE6 Y_RNA.660-201ENST00000516002 120 ntBASIC0.03□□□□□ -2.4
ZIM3Q96PE6 RNA5SP395-201ENST00000516567 118 ntBASIC0.03□□□□□ -2.4
ZIM3Q96PE6 MIR3657-201ENST00000584818 117 ntBASIC0.03□□□□□ -2.4
ZIM3Q96PE6 AC006254.2-201ENST00000603259 279 ntBASIC0.03□□□□□ -2.4
ZIM3Q96PE6 MIR6515-201ENST00000619843 57 ntBASIC0.03□□□□□ -2.4
ZIM3Q96PE6 Y_RNA.788-201ENST00000622394 112 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms