Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 MIR598-201ENST00000384868 97 ntBASIC1.05□□□□□ -2.24
DDX11Q96FC9 SNORD42B-201ENST00000458893 67 ntBASIC1.05□□□□□ -2.24
DDX11Q96FC9 RNU6-274P-201ENST00000459566 107 ntBASIC1.05□□□□□ -2.24
DDX11Q96FC9 SCARNA16.5-201ENST00000517114 183 ntBASIC1.05□□□□□ -2.24
DDX11Q96FC9 CYP3A137P-201ENST00000562436 69 ntBASIC1.05□□□□□ -2.24
DDX11Q96FC9 MIR5000-201ENST00000577717 103 ntBASIC1.05□□□□□ -2.24
DDX11Q96FC9 MIR4698-201ENST00000577795 80 ntBASIC1.05□□□□□ -2.24
DDX11Q96FC9 SNORA36.1-201ENST00000363424 132 ntBASIC1.04□□□□□ -2.24
DDX11Q96FC9 RNU6-716P-201ENST00000365621 103 ntBASIC1.04□□□□□ -2.24
DDX11Q96FC9 RNU6-800P-201ENST00000384473 103 ntBASIC1.04□□□□□ -2.24
DDX11Q96FC9 SNORD116-24-201ENST00000384549 92 ntBASIC1.04□□□□□ -2.24
DDX11Q96FC9 RPL39P28-201ENST00000465655 155 ntBASIC1.04□□□□□ -2.24
DDX11Q96FC9 MIR6828-201ENST00000636181 60 ntBASIC1.04□□□□□ -2.24
DDX11Q96FC9 Y_RNA.340-201ENST00000365330 92 ntBASIC1.03□□□□□ -2.24
DDX11Q96FC9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.03□□□□□ -2.24
DDX11Q96FC9 RNU6-752P-201ENST00000516376 102 ntBASIC1.03□□□□□ -2.24
DDX11Q96FC9 RNU6-881P-201ENST00000516813 102 ntBASIC1.03□□□□□ -2.24
DDX11Q96FC9 RNU6V-201ENST00000384105 107 ntBASIC1.02□□□□□ -2.25
DDX11Q96FC9 SNORA40.17-201ENST00000517256 115 ntBASIC1.02□□□□□ -2.25
DDX11Q96FC9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.02□□□□□ -2.25
DDX11Q96FC9 AC005520.4-201ENST00000604337 90 ntBASIC1.02□□□□□ -2.25
DDX11Q96FC9 PVT1_3.1-201ENST00000620853 95 ntBASIC1.02□□□□□ -2.25
DDX11Q96FC9 SNORD113.1-201ENST00000363280 73 ntBASIC1.01□□□□□ -2.25
DDX11Q96FC9 RNU4-45P-201ENST00000365469 141 ntBASIC1.01□□□□□ -2.25
DDX11Q96FC9 RNU6-1039P-201ENST00000383931 107 ntBASIC1.01□□□□□ -2.25
DDX11Q96FC9 MIR203A-201ENST00000384836 110 ntBASIC1.01□□□□□ -2.25
DDX11Q96FC9 AL353765.1-201ENST00000605514 183 ntBASIC1.01□□□□□ -2.25
DDX11Q96FC9 MT-TY-201ENST00000387409 66 ntBASIC1□□□□□ -2.25
DDX11Q96FC9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1□□□□□ -2.25
DDX11Q96FC9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1□□□□□ -2.25
DDX11Q96FC9 MIR548L-201ENST00000408303 86 ntBASIC1□□□□□ -2.25
DDX11Q96FC9 AL691482.2-201ENST00000457453 84 ntBASIC1□□□□□ -2.25
DDX11Q96FC9 RNA5SP436-201ENST00000516020 115 ntBASIC1□□□□□ -2.25
DDX11Q96FC9 RNU6-982P-201ENST00000516216 102 ntBASIC1□□□□□ -2.25
DDX11Q96FC9 MIR8053-201ENST00000613344 75 ntBASIC1□□□□□ -2.25
DDX11Q96FC9 AL109933.3-201ENST00000619095 188 ntBASIC1□□□□□ -2.25
DDX11Q96FC9 SNORA8.2-201ENST00000384372 139 ntBASIC0.99□□□□□ -2.25
DDX11Q96FC9 RNU6-269P-201ENST00000391077 97 ntBASIC0.99□□□□□ -2.25
DDX11Q96FC9 AC125388.1-201ENST00000459631 156 ntBASIC0.99□□□□□ -2.25
DDX11Q96FC9 AL162376.1-201ENST00000624117 175 ntBASIC0.99□□□□□ -2.25
DDX11Q96FC9 Y_RNA.205-201ENST00000364128 113 ntBASIC0.98□□□□□ -2.25
DDX11Q96FC9 RNU1-141P-201ENST00000364623 158 ntBASIC0.98□□□□□ -2.25
DDX11Q96FC9 RNU6-895P-201ENST00000384125 103 ntBASIC0.98□□□□□ -2.25
DDX11Q96FC9 Y_RNA.443-201ENST00000384135 111 ntBASIC0.98□□□□□ -2.25
DDX11Q96FC9 RNU6-630P-201ENST00000391258 106 ntBASIC0.98□□□□□ -2.25
DDX11Q96FC9 ACA64.5-201ENST00000516207 127 ntBASIC0.98□□□□□ -2.25
DDX11Q96FC9 RNA5SP94-201ENST00000516917 108 ntBASIC0.98□□□□□ -2.25
DDX11Q96FC9 MIR6509-201ENST00000614603 85 ntBASIC0.98□□□□□ -2.25
DDX11Q96FC9 MIR6779-201ENST00000617283 64 ntBASIC0.98□□□□□ -2.25
DDX11Q96FC9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.97□□□□□ -2.25
DDX11Q96FC9 MIR608-201ENST00000384820 100 ntBASIC0.97□□□□□ -2.25
DDX11Q96FC9 RNA5SP222-201ENST00000411039 105 ntBASIC0.97□□□□□ -2.25
DDX11Q96FC9 RNU6-990P-201ENST00000364385 104 ntBASIC0.96□□□□□ -2.26
DDX11Q96FC9 RNA5SP484-201ENST00000458857 111 ntBASIC0.96□□□□□ -2.26
DDX11Q96FC9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.96□□□□□ -2.26
DDX11Q96FC9 MIR3657-201ENST00000584818 117 ntBASIC0.96□□□□□ -2.26
DDX11Q96FC9 MIR7107-201ENST00000611489 80 ntBASIC0.96□□□□□ -2.26
DDX11Q96FC9 RNU6-1216P-201ENST00000362590 107 ntBASIC0.95□□□□□ -2.26
DDX11Q96FC9 SNORD114-2-201ENST00000363953 78 ntBASIC0.95□□□□□ -2.26
DDX11Q96FC9 RNU6-471P-201ENST00000383944 106 ntBASIC0.95□□□□□ -2.26
DDX11Q96FC9 MIR4460-201ENST00000577862 86 ntBASIC0.95□□□□□ -2.26
DDX11Q96FC9 SNORA25.4-201ENST00000363666 124 ntBASIC0.94□□□□□ -2.26
DDX11Q96FC9 MIR146A-201ENST00000385201 99 ntBASIC0.94□□□□□ -2.26
DDX11Q96FC9 RNU6-351P-201ENST00000516097 100 ntBASIC0.94□□□□□ -2.26
DDX11Q96FC9 RNA5SP268-201ENST00000516828 124 ntBASIC0.94□□□□□ -2.26
DDX11Q96FC9 AC018659.1-201ENST00000551083 169 ntBASIC0.94□□□□□ -2.26
DDX11Q96FC9 PSMC1P5-201ENST00000512850 177 ntBASIC0.93□□□□□ -2.26
DDX11Q96FC9 RNA5SP227-201ENST00000516184 113 ntBASIC0.93□□□□□ -2.26
DDX11Q96FC9 RNU5B-6P-201ENST00000516765 68 ntBASIC0.93□□□□□ -2.26
DDX11Q96FC9 AC069503.3-201ENST00000618674 145 ntBASIC0.93□□□□□ -2.26
DDX11Q96FC9 AC073869.9-201ENST00000641610 120 ntBASIC0.93□□□□□ -2.26
DDX11Q96FC9 MIR9-2-201ENST00000384838 87 ntBASIC0.92□□□□□ -2.26
DDX11Q96FC9 MIR4714-201ENST00000580728 77 ntBASIC0.92□□□□□ -2.26
DDX11Q96FC9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
DDX11Q96FC9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.91□□□□□ -2.26
DDX11Q96FC9 RNA5SP325-201ENST00000363756 130 ntBASIC0.91□□□□□ -2.26
DDX11Q96FC9 RNU6-260P-201ENST00000384092 107 ntBASIC0.91□□□□□ -2.26
DDX11Q96FC9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.91□□□□□ -2.26
DDX11Q96FC9 RNA5SP147-201ENST00000516493 109 ntBASIC0.91□□□□□ -2.26
DDX11Q96FC9 MIR4752-201ENST00000579672 72 ntBASIC0.91□□□□□ -2.26
DDX11Q96FC9 RNA5SP517-201ENST00000364724 117 ntBASIC0.9□□□□□ -2.27
DDX11Q96FC9 RNU1-29P-201ENST00000606574 126 ntBASIC0.9□□□□□ -2.27
DDX11Q96FC9 MIR6835-201ENST00000621552 64 ntBASIC0.9□□□□□ -2.27
DDX11Q96FC9 MIR6866-201ENST00000638146 69 ntBASIC0.9□□□□□ -2.27
DDX11Q96FC9 SNORA2.1-201ENST00000363089 137 ntBASIC0.89□□□□□ -2.27
DDX11Q96FC9 RNU6-645P-201ENST00000364649 106 ntBASIC0.89□□□□□ -2.27
DDX11Q96FC9 SNORA36.2-201ENST00000384004 127 ntBASIC0.89□□□□□ -2.27
DDX11Q96FC9 MIR4653-201ENST00000585107 83 ntBASIC0.89□□□□□ -2.27
DDX11Q96FC9 MIR548AE1-201ENST00000583292 70 ntBASIC0.88□□□□□ -2.27
DDX11Q96FC9 SNORA70.25-201ENST00000612741 95 ntBASIC0.88□□□□□ -2.27
DDX11Q96FC9 RNU6-110P-201ENST00000384508 104 ntBASIC0.87□□□□□ -2.27
DDX11Q96FC9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.87□□□□□ -2.27
DDX11Q96FC9 RNU6-656P-201ENST00000516785 107 ntBASIC0.87□□□□□ -2.27
DDX11Q96FC9 MIR4511-201ENST00000582784 87 ntBASIC0.87□□□□□ -2.27
DDX11Q96FC9 SNORD114-4-201ENST00000363962 75 ntBASIC0.86□□□□□ -2.27
DDX11Q96FC9 MIR508-201ENST00000384857 115 ntBASIC0.86□□□□□ -2.27
DDX11Q96FC9 MIR216A-201ENST00000385063 110 ntBASIC0.86□□□□□ -2.27
DDX11Q96FC9 MIR140-201ENST00000385282 100 ntBASIC0.86□□□□□ -2.27
DDX11Q96FC9 snoU13.13-201ENST00000458842 104 ntBASIC0.86□□□□□ -2.27
DDX11Q96FC9 RN7SL793P-201ENST00000583259 296 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 230.3 ms