Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 MIR466-201ENST00000580653 84 ntBASIC1.12□□□□□ -2.23
CHFRQ96EP1 AC067863.3-201ENST00000624172 122 ntBASIC1.12□□□□□ -2.23
CHFRQ96EP1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CHFRQ96EP1 SNORD41.1-201ENST00000391000 69 ntBASIC1.11□□□□□ -2.23
CHFRQ96EP1 AC002350.1-201ENST00000490759 375 ntBASIC1.11□□□□□ -2.23
CHFRQ96EP1 SNORA70.22-201ENST00000517160 124 ntBASIC1.11□□□□□ -2.23
CHFRQ96EP1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CHFRQ96EP1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
CHFRQ96EP1 SNORA2.1-201ENST00000363089 137 ntBASIC1.1□□□□□ -2.23
CHFRQ96EP1 RNA5SP299-201ENST00000391203 116 ntBASIC1.1□□□□□ -2.23
CHFRQ96EP1 RNA5SP147-201ENST00000516493 109 ntBASIC1.1□□□□□ -2.23
CHFRQ96EP1 MIR151B-201ENST00000584249 96 ntBASIC1.1□□□□□ -2.23
CHFRQ96EP1 PVT1_3.1-201ENST00000620853 95 ntBASIC1.1□□□□□ -2.23
CHFRQ96EP1 AC244669.1-204ENST00000621564 178 ntBASIC1.1□□□□□ -2.23
CHFRQ96EP1 SNORD28-201ENST00000384706 75 ntBASIC1.09□□□□□ -2.23
CHFRQ96EP1 MIR7-2-201ENST00000384970 110 ntBASIC1.09□□□□□ -2.23
CHFRQ96EP1 MT-TY-201ENST00000387409 66 ntBASIC1.09□□□□□ -2.23
CHFRQ96EP1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.09□□□□□ -2.23
CHFRQ96EP1 MIR4661-201ENST00000582720 75 ntBASIC1.09□□□□□ -2.23
CHFRQ96EP1 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
CHFRQ96EP1 MIR6515-201ENST00000619843 57 ntBASIC1.09□□□□□ -2.23
CHFRQ96EP1 MIR6739-201ENST00000622461 75 ntBASIC1.09□□□□□ -2.23
CHFRQ96EP1 SNORD113-4-201ENST00000364802 75 ntBASIC1.08□□□□□ -2.24
CHFRQ96EP1 SNORA75.1-201ENST00000391130 148 ntBASIC1.08□□□□□ -2.24
CHFRQ96EP1 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
CHFRQ96EP1 AC002429.1-201ENST00000437672 148 ntBASIC1.08□□□□□ -2.24
CHFRQ96EP1 RNA5SP436-201ENST00000516020 115 ntBASIC1.08□□□□□ -2.24
CHFRQ96EP1 RNU6-1223P-201ENST00000517124 104 ntBASIC1.08□□□□□ -2.24
CHFRQ96EP1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
CHFRQ96EP1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CHFRQ96EP1 RNU6-940P-201ENST00000363433 104 ntBASIC1.07□□□□□ -2.24
CHFRQ96EP1 RNU1-124P-201ENST00000363861 145 ntBASIC1.07□□□□□ -2.24
CHFRQ96EP1 RNU6-726P-201ENST00000364680 107 ntBASIC1.07□□□□□ -2.24
CHFRQ96EP1 RNU6-1089P-201ENST00000516473 104 ntBASIC1.07□□□□□ -2.24
CHFRQ96EP1 MIR3973-201ENST00000579824 107 ntBASIC1.07□□□□□ -2.24
CHFRQ96EP1 MIR4639-201ENST00000584938 69 ntBASIC1.07□□□□□ -2.24
CHFRQ96EP1 MIR7978-201ENST00000636158 59 ntBASIC1.07□□□□□ -2.24
CHFRQ96EP1 SNORD18A-201ENST00000363753 72 ntBASIC1.06□□□□□ -2.24
CHFRQ96EP1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.06□□□□□ -2.24
CHFRQ96EP1 RNA5SP215-201ENST00000363440 122 ntBASIC1.05□□□□□ -2.24
CHFRQ96EP1 RNU1-141P-201ENST00000364623 158 ntBASIC1.05□□□□□ -2.24
CHFRQ96EP1 RNA5SP117-201ENST00000365294 118 ntBASIC1.05□□□□□ -2.24
CHFRQ96EP1 RNU6-122P-201ENST00000516818 107 ntBASIC1.05□□□□□ -2.24
CHFRQ96EP1 RNA5SP47-201ENST00000517230 109 ntBASIC1.05□□□□□ -2.24
CHFRQ96EP1 AC018659.1-201ENST00000551083 169 ntBASIC1.05□□□□□ -2.24
CHFRQ96EP1 MIR4460-201ENST00000577862 86 ntBASIC1.05□□□□□ -2.24
CHFRQ96EP1 RNU4-38P-201ENST00000364472 129 ntBASIC1.04□□□□□ -2.24
CHFRQ96EP1 RNU6-269P-201ENST00000391077 97 ntBASIC1.04□□□□□ -2.24
CHFRQ96EP1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.04□□□□□ -2.24
CHFRQ96EP1 AL157398.1-201ENST00000452981 186 ntBASIC1.04□□□□□ -2.24
CHFRQ96EP1 snoU13.13-201ENST00000458842 104 ntBASIC1.04□□□□□ -2.24
CHFRQ96EP1 RNU7-74P-201ENST00000459104 62 ntBASIC1.04□□□□□ -2.24
CHFRQ96EP1 RNU5B-6P-201ENST00000516765 68 ntBASIC1.04□□□□□ -2.24
CHFRQ96EP1 SNORD60.1-201ENST00000362451 73 ntBASIC1.03□□□□□ -2.24
CHFRQ96EP1 RNU6-716P-201ENST00000365621 103 ntBASIC1.03□□□□□ -2.24
CHFRQ96EP1 SNORD89-201ENST00000390981 114 ntBASIC1.03□□□□□ -2.24
CHFRQ96EP1 RNU6-135P-201ENST00000516769 101 ntBASIC1.03□□□□□ -2.24
CHFRQ96EP1 RNA5SP480-201ENST00000516840 109 ntBASIC1.03□□□□□ -2.24
CHFRQ96EP1 MIR3938-201ENST00000582157 103 ntBASIC1.03□□□□□ -2.24
CHFRQ96EP1 MIR548V-201ENST00000584165 80 ntBASIC1.03□□□□□ -2.24
CHFRQ96EP1 RNU6-92P-201ENST00000605893 104 ntBASIC1.03□□□□□ -2.24
CHFRQ96EP1 SNORD105-201ENST00000386910 85 ntBASIC1.02□□□□□ -2.25
CHFRQ96EP1 MIR5000-201ENST00000577717 103 ntBASIC1.02□□□□□ -2.25
CHFRQ96EP1 MIR630-201ENST00000384957 97 ntBASIC1.01□□□□□ -2.25
CHFRQ96EP1 RNA5SP484-201ENST00000458857 111 ntBASIC1.01□□□□□ -2.25
CHFRQ96EP1 RNU6-1110P-201ENST00000516462 101 ntBASIC1.01□□□□□ -2.25
CHFRQ96EP1 MIR3678-201ENST00000578455 94 ntBASIC1.01□□□□□ -2.25
CHFRQ96EP1 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
CHFRQ96EP1 RNU6-1335P-201ENST00000365426 107 ntBASIC1□□□□□ -2.25
CHFRQ96EP1 MIR521-2-201ENST00000384818 87 ntBASIC1□□□□□ -2.25
CHFRQ96EP1 MIR19B1-201ENST00000384829 87 ntBASIC1□□□□□ -2.25
CHFRQ96EP1 MIR532-201ENST00000385025 91 ntBASIC1□□□□□ -2.25
CHFRQ96EP1 MIR548L-201ENST00000408303 86 ntBASIC1□□□□□ -2.25
CHFRQ96EP1 Y_RNA.633-201ENST00000459107 95 ntBASIC1□□□□□ -2.25
CHFRQ96EP1 U7.7-201ENST00000459276 60 ntBASIC1□□□□□ -2.25
CHFRQ96EP1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1□□□□□ -2.25
CHFRQ96EP1 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
CHFRQ96EP1 U2.7-201ENST00000619197 100 ntBASIC1□□□□□ -2.25
CHFRQ96EP1 Y_RNA.250-201ENST00000364542 110 ntBASIC0.99□□□□□ -2.25
CHFRQ96EP1 SNORA8.2-201ENST00000384372 139 ntBASIC0.99□□□□□ -2.25
CHFRQ96EP1 RNU7-174P-201ENST00000516248 59 ntBASIC0.99□□□□□ -2.25
CHFRQ96EP1 RNU6-469P-201ENST00000516253 101 ntBASIC0.99□□□□□ -2.25
CHFRQ96EP1 Y_RNA.722-201ENST00000517279 114 ntBASIC0.99□□□□□ -2.25
CHFRQ96EP1 U4.4-201ENST00000620626 117 ntBASIC0.99□□□□□ -2.25
CHFRQ96EP1 SNORD114-24-201ENST00000365029 72 ntBASIC0.98□□□□□ -2.25
CHFRQ96EP1 MIR598-201ENST00000384868 97 ntBASIC0.98□□□□□ -2.25
CHFRQ96EP1 MIR200A-201ENST00000384875 90 ntBASIC0.98□□□□□ -2.25
CHFRQ96EP1 MIR573-201ENST00000384964 99 ntBASIC0.98□□□□□ -2.25
CHFRQ96EP1 SCARNA16.5-201ENST00000517114 183 ntBASIC0.98□□□□□ -2.25
CHFRQ96EP1 MIR4698-201ENST00000577795 80 ntBASIC0.98□□□□□ -2.25
CHFRQ96EP1 MIR3612-201ENST00000579753 87 ntBASIC0.98□□□□□ -2.25
CHFRQ96EP1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.98□□□□□ -2.25
CHFRQ96EP1 AL162376.1-201ENST00000624117 175 ntBASIC0.98□□□□□ -2.25
CHFRQ96EP1 SNORA33.1-201ENST00000364957 130 ntBASIC0.97□□□□□ -2.25
CHFRQ96EP1 RNU6-302P-201ENST00000365249 107 ntBASIC0.97□□□□□ -2.25
CHFRQ96EP1 MIR582-201ENST00000365731 98 ntBASIC0.97□□□□□ -2.25
CHFRQ96EP1 RNU6-936P-201ENST00000384005 107 ntBASIC0.97□□□□□ -2.25
CHFRQ96EP1 RNU6-1162P-201ENST00000384443 104 ntBASIC0.97□□□□□ -2.25
CHFRQ96EP1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.97□□□□□ -2.25
CHFRQ96EP1 FABP5P4-201ENST00000437203 171 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 256.1 ms