Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.15□□□□□ -2.59
ZNF439Q8NDP4 RNU4-61P-201ENST00000411243 107 ntBASIC-1.15□□□□□ -2.59
ZNF439Q8NDP4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.15□□□□□ -2.59
ZNF439Q8NDP4 RNU4-71P-201ENST00000516258 113 ntBASIC-1.15□□□□□ -2.59
ZNF439Q8NDP4 SNORA18.5-201ENST00000516616 101 ntBASIC-1.15□□□□□ -2.59
ZNF439Q8NDP4 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.15□□□□□ -2.59
ZNF439Q8NDP4 AC026421.1-201ENST00000519101 163 ntBASIC-1.15□□□□□ -2.59
ZNF439Q8NDP4 MIR3128-201ENST00000581957 66 ntBASIC-1.15□□□□□ -2.59
ZNF439Q8NDP4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.15□□□□□ -2.59
ZNF439Q8NDP4 MIR548Z-201ENST00000584743 97 ntBASIC-1.15□□□□□ -2.59
ZNF439Q8NDP4 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.15□□□□□ -2.59
ZNF439Q8NDP4 MIR6874-201ENST00000635894 71 ntBASIC-1.15□□□□□ -2.59
ZNF439Q8NDP4 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.16□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.16□□□□□ -2.6
ZNF439Q8NDP4 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.16□□□□□ -2.6
ZNF439Q8NDP4 SNORA2.1-201ENST00000363089 137 ntBASIC-1.16□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.16□□□□□ -2.6
ZNF439Q8NDP4 RNU6-576P-201ENST00000390854 102 ntBASIC-1.16□□□□□ -2.6
ZNF439Q8NDP4 SNORD19-201ENST00000391191 68 ntBASIC-1.16□□□□□ -2.6
ZNF439Q8NDP4 AL158147.1-201ENST00000443970 75 ntBASIC-1.16□□□□□ -2.6
ZNF439Q8NDP4 RNA5SP461-201ENST00000516451 104 ntBASIC-1.16□□□□□ -2.6
ZNF439Q8NDP4 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.16□□□□□ -2.6
ZNF439Q8NDP4 MIR4694-201ENST00000578534 80 ntBASIC-1.16□□□□□ -2.6
ZNF439Q8NDP4 AL035470.1-201ENST00000622571 220 ntBASIC-1.16□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.17□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.17□□□□□ -2.6
ZNF439Q8NDP4 MIR507-201ENST00000385234 94 ntBASIC-1.17□□□□□ -2.6
ZNF439Q8NDP4 RNU6-644P-201ENST00000391155 98 ntBASIC-1.17□□□□□ -2.6
ZNF439Q8NDP4 AC006254.2-201ENST00000603259 279 ntBASIC-1.17□□□□□ -2.6
ZNF439Q8NDP4 RNU6-774P-201ENST00000363238 107 ntBASIC-1.18□□□□□ -2.6
ZNF439Q8NDP4 RNU6-80P-201ENST00000384195 107 ntBASIC-1.18□□□□□ -2.6
ZNF439Q8NDP4 MIR548I1-201ENST00000408810 149 ntBASIC-1.18□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.18□□□□□ -2.6
ZNF439Q8NDP4 RNU7-88P-201ENST00000458752 63 ntBASIC-1.18□□□□□ -2.6
ZNF439Q8NDP4 RNU6-62P-201ENST00000516526 102 ntBASIC-1.18□□□□□ -2.6
ZNF439Q8NDP4 AC138207.3-201ENST00000585289 166 ntBASIC-1.18□□□□□ -2.6
ZNF439Q8NDP4 MIR6502-201ENST00000617296 76 ntBASIC-1.18□□□□□ -2.6
ZNF439Q8NDP4 RNU6-246P-201ENST00000384702 107 ntBASIC-1.19□□□□□ -2.6
ZNF439Q8NDP4 SNORA19.1-201ENST00000410656 129 ntBASIC-1.19□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.19□□□□□ -2.6
ZNF439Q8NDP4 RPL35AP4-201ENST00000412007 102 ntBASIC-1.19□□□□□ -2.6
ZNF439Q8NDP4 HLA-S-202ENST00000425174 53 ntBASIC-1.19□□□□□ -2.6
ZNF439Q8NDP4 AL353691.2-201ENST00000443795 59 ntBASIC-1.19□□□□□ -2.6
ZNF439Q8NDP4 RNU7-154P-201ENST00000516194 62 ntBASIC-1.19□□□□□ -2.6
ZNF439Q8NDP4 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.19□□□□□ -2.6
ZNF439Q8NDP4 MIR5591-201ENST00000578248 65 ntBASIC-1.19□□□□□ -2.6
ZNF439Q8NDP4 MIR4520-1-201ENST00000582609 70 ntBASIC-1.19□□□□□ -2.6
ZNF439Q8NDP4 MIR4801-201ENST00000582704 82 ntBASIC-1.19□□□□□ -2.6
ZNF439Q8NDP4 MIR6129-201ENST00000616087 109 ntBASIC-1.19□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 RNY3P2-201ENST00000362918 102 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 SNORD58C-201ENST00000365223 64 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 RNU6-813P-201ENST00000384691 107 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 MIR521-2-201ENST00000384818 87 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 RNU6-519P-201ENST00000410590 108 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 MTATP6P29-201ENST00000415057 132 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 MTND3P2-201ENST00000438452 342 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 AL691482.2-201ENST00000457453 84 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 RNU6-732P-201ENST00000516033 103 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 RNU6-518P-201ENST00000516056 96 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 U7.5-201ENST00000517224 61 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 AL117187.1-201ENST00000555482 181 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 MIR4777-201ENST00000583710 86 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 AC025166.1-201ENST00000612411 163 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 AP001340.1-201ENST00000624405 217 ntBASIC-1.2□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.21□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.21□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.21□□□□□ -2.6
ZNF439Q8NDP4 RNU6-164P-201ENST00000364604 103 ntBASIC-1.21□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.21□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.21□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.21□□□□□ -2.6
ZNF439Q8NDP4 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.21□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.21□□□□□ -2.6
ZNF439Q8NDP4 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.21□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.22□□□□□ -2.6
ZNF439Q8NDP4 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.22□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.22□□□□□ -2.6
ZNF439Q8NDP4 MIR568-201ENST00000385036 95 ntBASIC-1.22□□□□□ -2.6
ZNF439Q8NDP4 RNU6-412P-201ENST00000516434 106 ntBASIC-1.22□□□□□ -2.6
ZNF439Q8NDP4 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.22□□□□□ -2.6
ZNF439Q8NDP4 RNU6-226P-201ENST00000363778 107 ntBASIC-1.23□□□□□ -2.61
ZNF439Q8NDP4 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.23□□□□□ -2.61
ZNF439Q8NDP4 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.23□□□□□ -2.61
ZNF439Q8NDP4 AL078595.1-201ENST00000404458 226 ntBASIC-1.23□□□□□ -2.61
ZNF439Q8NDP4 AC090616.4-201ENST00000448026 115 ntBASIC-1.23□□□□□ -2.61
ZNF439Q8NDP4 RNA5SP272-201ENST00000516095 111 ntBASIC-1.23□□□□□ -2.61
ZNF439Q8NDP4 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.23□□□□□ -2.61
ZNF439Q8NDP4 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.23□□□□□ -2.61
ZNF439Q8NDP4 RNU6-795P-201ENST00000516323 103 ntBASIC-1.23□□□□□ -2.61
ZNF439Q8NDP4 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.23□□□□□ -2.61
ZNF439Q8NDP4 RNU6-861P-201ENST00000516745 106 ntBASIC-1.23□□□□□ -2.61
ZNF439Q8NDP4 MIR4439-201ENST00000583746 80 ntBASIC-1.23□□□□□ -2.61
ZNF439Q8NDP4 AC072026.1-201ENST00000605023 201 ntBASIC-1.23□□□□□ -2.61
ZNF439Q8NDP4 U6.81-201ENST00000612550 106 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 521 ms