Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 RNU6-1335P-201ENST00000365426 107 ntBASIC1.12□□□□□ -2.23
TTC9BQ8N6N2 SNORD105-201ENST00000386910 85 ntBASIC1.12□□□□□ -2.23
TTC9BQ8N6N2 SNORD18A-201ENST00000363753 72 ntBASIC1.11□□□□□ -2.23
TTC9BQ8N6N2 RNA5SP192-201ENST00000364404 120 ntBASIC1.11□□□□□ -2.23
TTC9BQ8N6N2 SNORA25-201ENST00000384384 134 ntBASIC1.11□□□□□ -2.23
TTC9BQ8N6N2 MIR548C-201ENST00000384815 97 ntBASIC1.11□□□□□ -2.23
TTC9BQ8N6N2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
TTC9BQ8N6N2 RNU6-1079P-201ENST00000362861 110 ntBASIC1.1□□□□□ -2.23
TTC9BQ8N6N2 Y_RNA.375-201ENST00000365625 101 ntBASIC1.1□□□□□ -2.23
TTC9BQ8N6N2 MT-TY-201ENST00000387409 66 ntBASIC1.1□□□□□ -2.23
TTC9BQ8N6N2 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
TTC9BQ8N6N2 RNA5SP299-201ENST00000391203 116 ntBASIC1.1□□□□□ -2.23
TTC9BQ8N6N2 AC079150.2-201ENST00000443733 78 ntBASIC1.1□□□□□ -2.23
TTC9BQ8N6N2 SNORD124-201ENST00000459577 104 ntBASIC1.1□□□□□ -2.23
TTC9BQ8N6N2 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.1□□□□□ -2.23
TTC9BQ8N6N2 MIR4639-201ENST00000584938 69 ntBASIC1.1□□□□□ -2.23
TTC9BQ8N6N2 SNORA2.1-201ENST00000363089 137 ntBASIC1.09□□□□□ -2.23
TTC9BQ8N6N2 RNU6-726P-201ENST00000364680 107 ntBASIC1.09□□□□□ -2.23
TTC9BQ8N6N2 RNU6-614P-201ENST00000384369 107 ntBASIC1.09□□□□□ -2.23
TTC9BQ8N6N2 SNORD12-201ENST00000391002 90 ntBASIC1.09□□□□□ -2.23
TTC9BQ8N6N2 RNU6-269P-201ENST00000391077 97 ntBASIC1.09□□□□□ -2.23
TTC9BQ8N6N2 RNA5SP484-201ENST00000458857 111 ntBASIC1.09□□□□□ -2.23
TTC9BQ8N6N2 RNU6-656P-201ENST00000516785 107 ntBASIC1.09□□□□□ -2.23
TTC9BQ8N6N2 MIR3678-201ENST00000578455 94 ntBASIC1.09□□□□□ -2.23
TTC9BQ8N6N2 U6.59-201ENST00000615686 107 ntBASIC1.09□□□□□ -2.23
TTC9BQ8N6N2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
TTC9BQ8N6N2 SNORD41.1-201ENST00000391000 69 ntBASIC1.08□□□□□ -2.24
TTC9BQ8N6N2 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
TTC9BQ8N6N2 RNU7-74P-201ENST00000459104 62 ntBASIC1.08□□□□□ -2.24
TTC9BQ8N6N2 RNU6-542P-201ENST00000516405 103 ntBASIC1.08□□□□□ -2.24
TTC9BQ8N6N2 AC018659.1-201ENST00000551083 169 ntBASIC1.08□□□□□ -2.24
TTC9BQ8N6N2 MIR3612-201ENST00000579753 87 ntBASIC1.08□□□□□ -2.24
TTC9BQ8N6N2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.08□□□□□ -2.24
TTC9BQ8N6N2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
TTC9BQ8N6N2 SNORA25.5-201ENST00000363782 126 ntBASIC1.07□□□□□ -2.24
TTC9BQ8N6N2 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
TTC9BQ8N6N2 RNU1-141P-201ENST00000364623 158 ntBASIC1.07□□□□□ -2.24
TTC9BQ8N6N2 RNU6-669P-201ENST00000365575 107 ntBASIC1.07□□□□□ -2.24
TTC9BQ8N6N2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
TTC9BQ8N6N2 RNA5SP436-201ENST00000516020 115 ntBASIC1.07□□□□□ -2.24
TTC9BQ8N6N2 RNA5SP47-201ENST00000517230 109 ntBASIC1.07□□□□□ -2.24
TTC9BQ8N6N2 MIR466-201ENST00000580653 84 ntBASIC1.07□□□□□ -2.24
TTC9BQ8N6N2 MIR373-201ENST00000362273 69 ntBASIC1.06□□□□□ -2.24
TTC9BQ8N6N2 RNU6-829P-201ENST00000363700 112 ntBASIC1.06□□□□□ -2.24
TTC9BQ8N6N2 SNORA75.1-201ENST00000391130 148 ntBASIC1.06□□□□□ -2.24
TTC9BQ8N6N2 AL157398.1-201ENST00000452981 186 ntBASIC1.06□□□□□ -2.24
TTC9BQ8N6N2 SCARNA21.1-201ENST00000515996 128 ntBASIC1.06□□□□□ -2.24
TTC9BQ8N6N2 RNU6-1110P-201ENST00000516462 101 ntBASIC1.06□□□□□ -2.24
TTC9BQ8N6N2 RNU6-135P-201ENST00000516769 101 ntBASIC1.06□□□□□ -2.24
TTC9BQ8N6N2 RNA5SP404-201ENST00000517118 132 ntBASIC1.06□□□□□ -2.24
TTC9BQ8N6N2 MIR598-201ENST00000384868 97 ntBASIC1.05□□□□□ -2.24
TTC9BQ8N6N2 MIR573-201ENST00000384964 99 ntBASIC1.05□□□□□ -2.24
TTC9BQ8N6N2 U7.7-201ENST00000459276 60 ntBASIC1.05□□□□□ -2.24
TTC9BQ8N6N2 MIR4473-201ENST00000583731 91 ntBASIC1.05□□□□□ -2.24
TTC9BQ8N6N2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.04□□□□□ -2.24
TTC9BQ8N6N2 MIR548J-201ENST00000408833 112 ntBASIC1.04□□□□□ -2.24
TTC9BQ8N6N2 RNU6-141P-201ENST00000410499 105 ntBASIC1.04□□□□□ -2.24
TTC9BQ8N6N2 FABP5P4-201ENST00000437203 171 ntBASIC1.04□□□□□ -2.24
TTC9BQ8N6N2 RNU6-1089P-201ENST00000516473 104 ntBASIC1.04□□□□□ -2.24
TTC9BQ8N6N2 RNU6-1223P-201ENST00000517124 104 ntBASIC1.04□□□□□ -2.24
TTC9BQ8N6N2 MIR3973-201ENST00000579824 107 ntBASIC1.04□□□□□ -2.24
TTC9BQ8N6N2 MIR630-201ENST00000384957 97 ntBASIC1.03□□□□□ -2.24
TTC9BQ8N6N2 AC021146.9-201ENST00000512503 156 ntBASIC1.03□□□□□ -2.24
TTC9BQ8N6N2 SCARNA16.5-201ENST00000517114 183 ntBASIC1.03□□□□□ -2.24
TTC9BQ8N6N2 MIR151B-201ENST00000584249 96 ntBASIC1.03□□□□□ -2.24
TTC9BQ8N6N2 MIR6788-201ENST00000618842 66 ntBASIC1.03□□□□□ -2.24
TTC9BQ8N6N2 Y_RNA.374-201ENST00000365606 101 ntBASIC1.02□□□□□ -2.25
TTC9BQ8N6N2 RNA5SP227-201ENST00000516184 113 ntBASIC1.02□□□□□ -2.25
TTC9BQ8N6N2 AC011195.1-201ENST00000578177 177 ntBASIC1.02□□□□□ -2.25
TTC9BQ8N6N2 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
TTC9BQ8N6N2 MIR548AE1-201ENST00000583292 70 ntBASIC1.01□□□□□ -2.25
TTC9BQ8N6N2 MIR6739-201ENST00000622461 75 ntBASIC1.01□□□□□ -2.25
TTC9BQ8N6N2 RNU1-124P-201ENST00000363861 145 ntBASIC1□□□□□ -2.25
TTC9BQ8N6N2 Y_RNA.236-201ENST00000364427 111 ntBASIC1□□□□□ -2.25
TTC9BQ8N6N2 SNORA8.2-201ENST00000384372 139 ntBASIC1□□□□□ -2.25
TTC9BQ8N6N2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1□□□□□ -2.25
TTC9BQ8N6N2 SNORD99-201ENST00000408612 74 ntBASIC1□□□□□ -2.25
TTC9BQ8N6N2 MIR4698-201ENST00000577795 80 ntBASIC1□□□□□ -2.25
TTC9BQ8N6N2 RNU6-940P-201ENST00000363433 104 ntBASIC0.99□□□□□ -2.25
TTC9BQ8N6N2 SNORA33.1-201ENST00000364957 130 ntBASIC0.99□□□□□ -2.25
TTC9BQ8N6N2 RNU6-1162P-201ENST00000384443 104 ntBASIC0.99□□□□□ -2.25
TTC9BQ8N6N2 MIR532-201ENST00000385025 91 ntBASIC0.99□□□□□ -2.25
TTC9BQ8N6N2 MIR652-201ENST00000385278 98 ntBASIC0.99□□□□□ -2.25
TTC9BQ8N6N2 MIR4752-201ENST00000579672 72 ntBASIC0.99□□□□□ -2.25
TTC9BQ8N6N2 RNU6-446P-201ENST00000362827 106 ntBASIC0.98□□□□□ -2.25
TTC9BQ8N6N2 SNORA36.1-201ENST00000363424 132 ntBASIC0.98□□□□□ -2.25
TTC9BQ8N6N2 RNA5SP215-201ENST00000363440 122 ntBASIC0.98□□□□□ -2.25
TTC9BQ8N6N2 MIR582-201ENST00000365731 98 ntBASIC0.98□□□□□ -2.25
TTC9BQ8N6N2 AC006210.1-201ENST00000424882 111 ntBASIC0.98□□□□□ -2.25
TTC9BQ8N6N2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.98□□□□□ -2.25
TTC9BQ8N6N2 AC211469.2-201ENST00000605461 205 ntBASIC0.98□□□□□ -2.25
TTC9BQ8N6N2 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.97□□□□□ -2.25
TTC9BQ8N6N2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TTC9BQ8N6N2 MIR18A-201ENST00000362310 71 ntBASIC0.97□□□□□ -2.25
TTC9BQ8N6N2 SNORD114-4-201ENST00000363962 75 ntBASIC0.97□□□□□ -2.25
TTC9BQ8N6N2 RNU6-92P-201ENST00000605893 104 ntBASIC0.97□□□□□ -2.25
TTC9BQ8N6N2 AL162376.1-201ENST00000624117 175 ntBASIC0.97□□□□□ -2.25
TTC9BQ8N6N2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
TTC9BQ8N6N2 SNORD60.1-201ENST00000362451 73 ntBASIC0.96□□□□□ -2.26
TTC9BQ8N6N2 RNU6-302P-201ENST00000365249 107 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms