Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RNU6-716P-201ENST00000365621 103 ntBASIC0.85□□□□□ -2.27
VRK3Q8IV63 RNU6-800P-201ENST00000384473 103 ntBASIC0.85□□□□□ -2.27
VRK3Q8IV63 SNORD45A-201ENST00000384512 84 ntBASIC0.85□□□□□ -2.27
VRK3Q8IV63 SNORD30.1-201ENST00000391309 70 ntBASIC0.85□□□□□ -2.27
VRK3Q8IV63 MIR548L-201ENST00000408303 86 ntBASIC0.85□□□□□ -2.27
VRK3Q8IV63 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.85□□□□□ -2.27
VRK3Q8IV63 AC011195.1-201ENST00000578177 177 ntBASIC0.85□□□□□ -2.27
VRK3Q8IV63 AC022709.1-201ENST00000615967 87 ntBASIC0.85□□□□□ -2.27
VRK3Q8IV63 SNORD113.1-201ENST00000363280 73 ntBASIC0.84□□□□□ -2.27
VRK3Q8IV63 SNORD116-24-201ENST00000384549 92 ntBASIC0.84□□□□□ -2.27
VRK3Q8IV63 RNU6-604P-201ENST00000390917 100 ntBASIC0.84□□□□□ -2.27
VRK3Q8IV63 MIR548J-201ENST00000408833 112 ntBASIC0.84□□□□□ -2.27
VRK3Q8IV63 MIR151B-201ENST00000584249 96 ntBASIC0.84□□□□□ -2.27
VRK3Q8IV63 AL353765.1-201ENST00000605514 183 ntBASIC0.84□□□□□ -2.27
VRK3Q8IV63 RNU6-260P-201ENST00000384092 107 ntBASIC0.83□□□□□ -2.28
VRK3Q8IV63 MIR1265-201ENST00000408444 86 ntBASIC0.83□□□□□ -2.28
VRK3Q8IV63 RNU6-881P-201ENST00000516813 102 ntBASIC0.83□□□□□ -2.28
VRK3Q8IV63 RNA5SP94-201ENST00000516917 108 ntBASIC0.83□□□□□ -2.28
VRK3Q8IV63 RNU6-1223P-201ENST00000517124 104 ntBASIC0.83□□□□□ -2.28
VRK3Q8IV63 SNORA40.17-201ENST00000517256 115 ntBASIC0.83□□□□□ -2.28
VRK3Q8IV63 MIR6509-201ENST00000614603 85 ntBASIC0.83□□□□□ -2.28
VRK3Q8IV63 AC069503.3-201ENST00000618674 145 ntBASIC0.83□□□□□ -2.28
VRK3Q8IV63 MIR6788-201ENST00000618842 66 ntBASIC0.83□□□□□ -2.28
VRK3Q8IV63 RNU6-1216P-201ENST00000362590 107 ntBASIC0.82□□□□□ -2.28
VRK3Q8IV63 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.82□□□□□ -2.28
VRK3Q8IV63 RNA5SP484-201ENST00000458857 111 ntBASIC0.82□□□□□ -2.28
VRK3Q8IV63 RNA5SP268-201ENST00000516828 124 ntBASIC0.82□□□□□ -2.28
VRK3Q8IV63 MIR4661-201ENST00000582720 75 ntBASIC0.82□□□□□ -2.28
VRK3Q8IV63 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.82□□□□□ -2.28
VRK3Q8IV63 MIR6857-201ENST00000613267 93 ntBASIC0.82□□□□□ -2.28
VRK3Q8IV63 RNU6-895P-201ENST00000384125 103 ntBASIC0.81□□□□□ -2.28
VRK3Q8IV63 MIR7-2-201ENST00000384970 110 ntBASIC0.81□□□□□ -2.28
VRK3Q8IV63 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.81□□□□□ -2.28
VRK3Q8IV63 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.81□□□□□ -2.28
VRK3Q8IV63 RNA5SP227-201ENST00000516184 113 ntBASIC0.81□□□□□ -2.28
VRK3Q8IV63 AC018659.1-201ENST00000551083 169 ntBASIC0.81□□□□□ -2.28
VRK3Q8IV63 MIR3657-201ENST00000584818 117 ntBASIC0.81□□□□□ -2.28
VRK3Q8IV63 AC005520.4-201ENST00000604337 90 ntBASIC0.81□□□□□ -2.28
VRK3Q8IV63 AC073869.9-201ENST00000641610 120 ntBASIC0.81□□□□□ -2.28
VRK3Q8IV63 RNU6-471P-201ENST00000383944 106 ntBASIC0.8□□□□□ -2.28
VRK3Q8IV63 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
VRK3Q8IV63 SNORD114-4-201ENST00000363962 75 ntBASIC0.79□□□□□ -2.28
VRK3Q8IV63 Y_RNA.443-201ENST00000384135 111 ntBASIC0.79□□□□□ -2.28
VRK3Q8IV63 RNU6-630P-201ENST00000391258 106 ntBASIC0.79□□□□□ -2.28
VRK3Q8IV63 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.79□□□□□ -2.28
VRK3Q8IV63 AC125388.1-201ENST00000459631 156 ntBASIC0.79□□□□□ -2.28
VRK3Q8IV63 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
VRK3Q8IV63 RNA5SP480-201ENST00000516840 109 ntBASIC0.79□□□□□ -2.28
VRK3Q8IV63 MIR7107-201ENST00000611489 80 ntBASIC0.79□□□□□ -2.28
VRK3Q8IV63 SNORA2.1-201ENST00000363089 137 ntBASIC0.78□□□□□ -2.28
VRK3Q8IV63 MIR203A-201ENST00000384836 110 ntBASIC0.78□□□□□ -2.28
VRK3Q8IV63 RNU6-982P-201ENST00000516216 102 ntBASIC0.78□□□□□ -2.28
VRK3Q8IV63 RNU5B-6P-201ENST00000516765 68 ntBASIC0.78□□□□□ -2.28
VRK3Q8IV63 AC211469.2-201ENST00000605461 205 ntBASIC0.78□□□□□ -2.28
VRK3Q8IV63 SNORA25.4-201ENST00000363666 124 ntBASIC0.77□□□□□ -2.29
VRK3Q8IV63 Y_RNA.540-201ENST00000384638 111 ntBASIC0.77□□□□□ -2.29
VRK3Q8IV63 MIR598-201ENST00000384868 97 ntBASIC0.77□□□□□ -2.29
VRK3Q8IV63 PVT1_3.1-201ENST00000620853 95 ntBASIC0.77□□□□□ -2.29
VRK3Q8IV63 RNU6-990P-201ENST00000364385 104 ntBASIC0.76□□□□□ -2.29
VRK3Q8IV63 Y_RNA.340-201ENST00000365330 92 ntBASIC0.76□□□□□ -2.29
VRK3Q8IV63 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
VRK3Q8IV63 RNA5SP222-201ENST00000411039 105 ntBASIC0.76□□□□□ -2.29
VRK3Q8IV63 MIR6739-201ENST00000622461 75 ntBASIC0.76□□□□□ -2.29
VRK3Q8IV63 Y_RNA.205-201ENST00000364128 113 ntBASIC0.75□□□□□ -2.29
VRK3Q8IV63 Y_RNA.250-201ENST00000364542 110 ntBASIC0.75□□□□□ -2.29
VRK3Q8IV63 MIR608-201ENST00000384820 100 ntBASIC0.75□□□□□ -2.29
VRK3Q8IV63 RNU1-29P-201ENST00000606574 126 ntBASIC0.75□□□□□ -2.29
VRK3Q8IV63 RNA5SP517-201ENST00000364724 117 ntBASIC0.74□□□□□ -2.29
VRK3Q8IV63 RNA5SP436-201ENST00000516020 115 ntBASIC0.74□□□□□ -2.29
VRK3Q8IV63 RNU6-645P-201ENST00000364649 106 ntBASIC0.73□□□□□ -2.29
VRK3Q8IV63 RNY1P8-201ENST00000383970 114 ntBASIC0.73□□□□□ -2.29
VRK3Q8IV63 Y_RNA.407-201ENST00000383986 113 ntBASIC0.73□□□□□ -2.29
VRK3Q8IV63 SNORD110-201ENST00000408189 75 ntBASIC0.73□□□□□ -2.29
VRK3Q8IV63 RNU6-656P-201ENST00000516785 107 ntBASIC0.73□□□□□ -2.29
VRK3Q8IV63 MIR5706-201ENST00000579841 80 ntBASIC0.73□□□□□ -2.29
VRK3Q8IV63 SNORD114-26-201ENST00000363543 72 ntBASIC0.72□□□□□ -2.29
VRK3Q8IV63 MIR652-201ENST00000385278 98 ntBASIC0.72□□□□□ -2.29
VRK3Q8IV63 MIR140-201ENST00000385282 100 ntBASIC0.72□□□□□ -2.29
VRK3Q8IV63 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.72□□□□□ -2.29
VRK3Q8IV63 AC006210.1-201ENST00000424882 111 ntBASIC0.72□□□□□ -2.29
VRK3Q8IV63 MTND4LP1-201ENST00000446263 157 ntBASIC0.72□□□□□ -2.29
VRK3Q8IV63 Y_RNA.633-201ENST00000459107 95 ntBASIC0.72□□□□□ -2.29
VRK3Q8IV63 SCARNA17.3-201ENST00000516381 125 ntBASIC0.72□□□□□ -2.29
VRK3Q8IV63 MIR5000-201ENST00000577717 103 ntBASIC0.72□□□□□ -2.29
VRK3Q8IV63 MIR4511-201ENST00000582784 87 ntBASIC0.72□□□□□ -2.29
VRK3Q8IV63 MIR548AE1-201ENST00000583292 70 ntBASIC0.72□□□□□ -2.29
VRK3Q8IV63 SNORA70.25-201ENST00000612741 95 ntBASIC0.72□□□□□ -2.29
VRK3Q8IV63 AC103706.3-201ENST00000636297 85 ntBASIC0.72□□□□□ -2.29
VRK3Q8IV63 SNORD118-201ENST00000363593 134 ntBASIC0.71□□□□□ -2.3
VRK3Q8IV63 CYP3A137P-201ENST00000562436 69 ntBASIC0.71□□□□□ -2.3
VRK3Q8IV63 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.71□□□□□ -2.3
VRK3Q8IV63 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
VRK3Q8IV63 MIR521-2-201ENST00000384818 87 ntBASIC0.7□□□□□ -2.3
VRK3Q8IV63 ACA64.5-201ENST00000516207 127 ntBASIC0.7□□□□□ -2.3
VRK3Q8IV63 MIR6779-201ENST00000617283 64 ntBASIC0.7□□□□□ -2.3
VRK3Q8IV63 RNU6-668P-201ENST00000364180 107 ntBASIC0.69□□□□□ -2.3
VRK3Q8IV63 Y_RNA.375-201ENST00000365625 101 ntBASIC0.69□□□□□ -2.3
VRK3Q8IV63 RNU6-110P-201ENST00000384508 104 ntBASIC0.69□□□□□ -2.3
VRK3Q8IV63 HMGN2P22-201ENST00000427588 175 ntBASIC0.69□□□□□ -2.3
VRK3Q8IV63 AC069271.1-201ENST00000445577 156 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 307.9 ms