Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MIR608-201ENST00000384820 100 ntBASIC1.21□□□□□ -2.22
NPAS4Q8IUM7 SNORA25.4-201ENST00000363666 124 ntBASIC1.2□□□□□ -2.22
NPAS4Q8IUM7 RNU7-74P-201ENST00000459104 62 ntBASIC1.2□□□□□ -2.22
NPAS4Q8IUM7 MIR151B-201ENST00000584249 96 ntBASIC1.2□□□□□ -2.22
NPAS4Q8IUM7 MIR6788-201ENST00000618842 66 ntBASIC1.2□□□□□ -2.22
NPAS4Q8IUM7 AL109933.3-201ENST00000619095 188 ntBASIC1.2□□□□□ -2.22
NPAS4Q8IUM7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.2□□□□□ -2.22
NPAS4Q8IUM7 Y_RNA.540-201ENST00000384638 111 ntBASIC1.19□□□□□ -2.22
NPAS4Q8IUM7 MIR9-2-201ENST00000384838 87 ntBASIC1.19□□□□□ -2.22
NPAS4Q8IUM7 MT-TY-201ENST00000387409 66 ntBASIC1.19□□□□□ -2.22
NPAS4Q8IUM7 RNU6-269P-201ENST00000391077 97 ntBASIC1.19□□□□□ -2.22
NPAS4Q8IUM7 RNA5SP222-201ENST00000411039 105 ntBASIC1.19□□□□□ -2.22
NPAS4Q8IUM7 MIR4460-201ENST00000577862 86 ntBASIC1.19□□□□□ -2.22
NPAS4Q8IUM7 MIR3657-201ENST00000584818 117 ntBASIC1.19□□□□□ -2.22
NPAS4Q8IUM7 RNU6-260P-201ENST00000384092 107 ntBASIC1.18□□□□□ -2.22
NPAS4Q8IUM7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.18□□□□□ -2.22
NPAS4Q8IUM7 RNU1-141P-201ENST00000364623 158 ntBASIC1.17□□□□□ -2.22
NPAS4Q8IUM7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.17□□□□□ -2.22
NPAS4Q8IUM7 RNU5B-6P-201ENST00000516765 68 ntBASIC1.17□□□□□ -2.22
NPAS4Q8IUM7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.17□□□□□ -2.22
NPAS4Q8IUM7 AC211469.2-201ENST00000605461 205 ntBASIC1.17□□□□□ -2.22
NPAS4Q8IUM7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
NPAS4Q8IUM7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
NPAS4Q8IUM7 MIR18A-201ENST00000362310 71 ntBASIC1.16□□□□□ -2.22
NPAS4Q8IUM7 RNU6-990P-201ENST00000364385 104 ntBASIC1.16□□□□□ -2.22
NPAS4Q8IUM7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.16□□□□□ -2.22
NPAS4Q8IUM7 MIR548J-201ENST00000408833 112 ntBASIC1.16□□□□□ -2.22
NPAS4Q8IUM7 SCARNA16.5-201ENST00000517114 183 ntBASIC1.16□□□□□ -2.22
NPAS4Q8IUM7 RNU6-110P-201ENST00000384508 104 ntBASIC1.15□□□□□ -2.23
NPAS4Q8IUM7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.15□□□□□ -2.23
NPAS4Q8IUM7 RNA5SP484-201ENST00000458857 111 ntBASIC1.15□□□□□ -2.23
NPAS4Q8IUM7 RNA5SP147-201ENST00000516493 109 ntBASIC1.15□□□□□ -2.23
NPAS4Q8IUM7 SNORA40.17-201ENST00000517256 115 ntBASIC1.15□□□□□ -2.23
NPAS4Q8IUM7 MIR6515-201ENST00000619843 57 ntBASIC1.15□□□□□ -2.23
NPAS4Q8IUM7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
NPAS4Q8IUM7 ACA64.5-201ENST00000516207 127 ntBASIC1.14□□□□□ -2.23
NPAS4Q8IUM7 AC018659.1-201ENST00000551083 169 ntBASIC1.14□□□□□ -2.23
NPAS4Q8IUM7 AC073869.9-201ENST00000641610 120 ntBASIC1.14□□□□□ -2.23
NPAS4Q8IUM7 RNU6-668P-201ENST00000364180 107 ntBASIC1.12□□□□□ -2.23
NPAS4Q8IUM7 RNU6-1187P-201ENST00000364771 110 ntBASIC1.12□□□□□ -2.23
NPAS4Q8IUM7 SNORA36.2-201ENST00000384004 127 ntBASIC1.12□□□□□ -2.23
NPAS4Q8IUM7 SNORA8.2-201ENST00000384372 139 ntBASIC1.12□□□□□ -2.23
NPAS4Q8IUM7 MTND4LP1-201ENST00000446263 157 ntBASIC1.12□□□□□ -2.23
NPAS4Q8IUM7 SNORD114-21-201ENST00000606412 72 ntBASIC1.12□□□□□ -2.23
NPAS4Q8IUM7 SNORA36.1-201ENST00000363424 132 ntBASIC1.11□□□□□ -2.23
NPAS4Q8IUM7 RNU6-645P-201ENST00000364649 106 ntBASIC1.11□□□□□ -2.23
NPAS4Q8IUM7 MIR4511-201ENST00000582784 87 ntBASIC1.11□□□□□ -2.23
NPAS4Q8IUM7 MIR6828-201ENST00000636181 60 ntBASIC1.11□□□□□ -2.23
NPAS4Q8IUM7 PSMC1P5-201ENST00000512850 177 ntBASIC1.1□□□□□ -2.23
NPAS4Q8IUM7 RNA5SP227-201ENST00000516184 113 ntBASIC1.1□□□□□ -2.23
NPAS4Q8IUM7 RNA5SP480-201ENST00000516840 109 ntBASIC1.1□□□□□ -2.23
NPAS4Q8IUM7 AL162376.1-201ENST00000624117 175 ntBASIC1.1□□□□□ -2.23
NPAS4Q8IUM7 MIR373-201ENST00000362273 69 ntBASIC1.09□□□□□ -2.23
NPAS4Q8IUM7 SNORA2.1-201ENST00000363089 137 ntBASIC1.09□□□□□ -2.23
NPAS4Q8IUM7 RNU4-38P-201ENST00000364472 129 ntBASIC1.09□□□□□ -2.23
NPAS4Q8IUM7 MIR7-2-201ENST00000384970 110 ntBASIC1.09□□□□□ -2.23
NPAS4Q8IUM7 PVT1_3.1-201ENST00000620853 95 ntBASIC1.09□□□□□ -2.23
NPAS4Q8IUM7 MIR532-201ENST00000385025 91 ntBASIC1.08□□□□□ -2.24
NPAS4Q8IUM7 snoU13.13-201ENST00000458842 104 ntBASIC1.08□□□□□ -2.24
NPAS4Q8IUM7 RNA5SP268-201ENST00000516828 124 ntBASIC1.08□□□□□ -2.24
NPAS4Q8IUM7 AC069503.3-201ENST00000618674 145 ntBASIC1.08□□□□□ -2.24
NPAS4Q8IUM7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.08□□□□□ -2.24
NPAS4Q8IUM7 AC103706.3-201ENST00000636297 85 ntBASIC1.08□□□□□ -2.24
NPAS4Q8IUM7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
NPAS4Q8IUM7 MIR140-201ENST00000385282 100 ntBASIC1.07□□□□□ -2.24
NPAS4Q8IUM7 MIR6857-201ENST00000613267 93 ntBASIC1.07□□□□□ -2.24
NPAS4Q8IUM7 MIR598-201ENST00000384868 97 ntBASIC1.06□□□□□ -2.24
NPAS4Q8IUM7 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
NPAS4Q8IUM7 RNU6-656P-201ENST00000516785 107 ntBASIC1.06□□□□□ -2.24
NPAS4Q8IUM7 RNA5SP94-201ENST00000516917 108 ntBASIC1.06□□□□□ -2.24
NPAS4Q8IUM7 MIR7107-201ENST00000611489 80 ntBASIC1.05□□□□□ -2.24
NPAS4Q8IUM7 MIR6739-201ENST00000622461 75 ntBASIC1.05□□□□□ -2.24
NPAS4Q8IUM7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
NPAS4Q8IUM7 SNORD114-4-201ENST00000363962 75 ntBASIC1.04□□□□□ -2.24
NPAS4Q8IUM7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.04□□□□□ -2.24
NPAS4Q8IUM7 AC110620.1-201ENST00000416042 228 ntBASIC1.04□□□□□ -2.24
NPAS4Q8IUM7 MIR3973-201ENST00000579824 107 ntBASIC1.04□□□□□ -2.24
NPAS4Q8IUM7 Y_RNA.375-201ENST00000365625 101 ntBASIC1.03□□□□□ -2.24
NPAS4Q8IUM7 RNY1P8-201ENST00000383970 114 ntBASIC1.03□□□□□ -2.24
NPAS4Q8IUM7 MIR652-201ENST00000385278 98 ntBASIC1.03□□□□□ -2.24
NPAS4Q8IUM7 MIR5000-201ENST00000577717 103 ntBASIC1.03□□□□□ -2.24
NPAS4Q8IUM7 MIR4473-201ENST00000583731 91 ntBASIC1.03□□□□□ -2.24
NPAS4Q8IUM7 SNORD114-26-201ENST00000363543 72 ntBASIC1.02□□□□□ -2.25
NPAS4Q8IUM7 SNORD110-201ENST00000408189 75 ntBASIC1.02□□□□□ -2.25
NPAS4Q8IUM7 AC006210.1-201ENST00000424882 111 ntBASIC1.02□□□□□ -2.25
NPAS4Q8IUM7 RNU6-542P-201ENST00000516405 103 ntBASIC1.02□□□□□ -2.25
NPAS4Q8IUM7 CYP3A137P-201ENST00000562436 69 ntBASIC1.02□□□□□ -2.25
NPAS4Q8IUM7 MIR4752-201ENST00000579672 72 ntBASIC1.02□□□□□ -2.25
NPAS4Q8IUM7 MIR548AE1-201ENST00000583292 70 ntBASIC1.02□□□□□ -2.25
NPAS4Q8IUM7 AL590095.2-201ENST00000604136 117 ntBASIC1.01□□□□□ -2.25
NPAS4Q8IUM7 SNORA70.25-201ENST00000612741 95 ntBASIC1.01□□□□□ -2.25
NPAS4Q8IUM7 AC092634.7-201ENST00000621022 103 ntBASIC1.01□□□□□ -2.25
NPAS4Q8IUM7 Y_RNA.407-201ENST00000383986 113 ntBASIC1□□□□□ -2.25
NPAS4Q8IUM7 MIR4653-201ENST00000585107 83 ntBASIC1□□□□□ -2.25
NPAS4Q8IUM7 RNU6-499P-201ENST00000365615 107 ntBASIC0.99□□□□□ -2.25
NPAS4Q8IUM7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
NPAS4Q8IUM7 SNORD71-201ENST00000411292 86 ntBASIC0.99□□□□□ -2.25
NPAS4Q8IUM7 RNU6-1089P-201ENST00000516473 104 ntBASIC0.99□□□□□ -2.25
NPAS4Q8IUM7 RNU6-1162P-201ENST00000384443 104 ntBASIC0.98□□□□□ -2.25
NPAS4Q8IUM7 RNA5SP299-201ENST00000391203 116 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms