Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
SH3RF1Q7Z6J0 RNU6-753P-201ENST00000363926 107 ntBASIC1.74□□□□□ -2.13
SH3RF1Q7Z6J0 MIR320A-201ENST00000385302 82 ntBASIC1.74□□□□□ -2.13
SH3RF1Q7Z6J0 SNORD89-201ENST00000390981 114 ntBASIC1.74□□□□□ -2.13
SH3RF1Q7Z6J0 FABP5P4-201ENST00000437203 171 ntBASIC1.74□□□□□ -2.13
SH3RF1Q7Z6J0 RNA5SP480-201ENST00000516840 109 ntBASIC1.74□□□□□ -2.13
SH3RF1Q7Z6J0 RNU1-92P-201ENST00000517017 135 ntBASIC1.74□□□□□ -2.13
SH3RF1Q7Z6J0 MIR548AD-201ENST00000584780 82 ntBASIC1.74□□□□□ -2.13
SH3RF1Q7Z6J0 U4.4-201ENST00000620626 117 ntBASIC1.74□□□□□ -2.13
SH3RF1Q7Z6J0 SNORA25-201ENST00000384384 134 ntBASIC1.73□□□□□ -2.13
SH3RF1Q7Z6J0 MIR517B-201ENST00000385102 67 ntBASIC1.73□□□□□ -2.13
SH3RF1Q7Z6J0 MIR4460-201ENST00000577862 86 ntBASIC1.73□□□□□ -2.13
SH3RF1Q7Z6J0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.73□□□□□ -2.13
SH3RF1Q7Z6J0 MIR6734-201ENST00000621166 68 ntBASIC1.73□□□□□ -2.13
SH3RF1Q7Z6J0 AC244669.1-204ENST00000621564 178 ntBASIC1.73□□□□□ -2.13
SH3RF1Q7Z6J0 SNORD114-4-201ENST00000363962 75 ntBASIC1.72□□□□□ -2.13
SH3RF1Q7Z6J0 MIR548C-201ENST00000384815 97 ntBASIC1.72□□□□□ -2.13
SH3RF1Q7Z6J0 RNA5SP220-201ENST00000516298 104 ntBASIC1.72□□□□□ -2.13
SH3RF1Q7Z6J0 RNU6-980P-201ENST00000516925 103 ntBASIC1.72□□□□□ -2.13
SH3RF1Q7Z6J0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
SH3RF1Q7Z6J0 MIR96-201ENST00000362288 78 ntBASIC1.71□□□□□ -2.14
SH3RF1Q7Z6J0 SNORD28-201ENST00000384706 75 ntBASIC1.71□□□□□ -2.14
SH3RF1Q7Z6J0 SNORD105-201ENST00000386910 85 ntBASIC1.71□□□□□ -2.14
SH3RF1Q7Z6J0 Y_RNA.633-201ENST00000459107 95 ntBASIC1.71□□□□□ -2.14
SH3RF1Q7Z6J0 RNU1-141P-201ENST00000364623 158 ntBASIC1.7□□□□□ -2.14
SH3RF1Q7Z6J0 snoU13.13-201ENST00000458842 104 ntBASIC1.69□□□□□ -2.14
SH3RF1Q7Z6J0 U7.7-201ENST00000459276 60 ntBASIC1.69□□□□□ -2.14
SH3RF1Q7Z6J0 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.69□□□□□ -2.14
SH3RF1Q7Z6J0 AL353770.2-201ENST00000620024 78 ntBASIC1.69□□□□□ -2.14
SH3RF1Q7Z6J0 RNU6-726P-201ENST00000364680 107 ntBASIC1.68□□□□□ -2.14
SH3RF1Q7Z6J0 MIR517C-201ENST00000385103 95 ntBASIC1.68□□□□□ -2.14
SH3RF1Q7Z6J0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SH3RF1Q7Z6J0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.68□□□□□ -2.14
SH3RF1Q7Z6J0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SH3RF1Q7Z6J0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
SH3RF1Q7Z6J0 SNORA15B-2-201ENST00000384058 135 ntBASIC1.67□□□□□ -2.14
SH3RF1Q7Z6J0 SNORA15B-1-201ENST00000384334 135 ntBASIC1.67□□□□□ -2.14
SH3RF1Q7Z6J0 MIR1304-201ENST00000408243 91 ntBASIC1.67□□□□□ -2.14
SH3RF1Q7Z6J0 AC021146.9-201ENST00000512503 156 ntBASIC1.67□□□□□ -2.14
SH3RF1Q7Z6J0 SNORA31.24-201ENST00000517232 57 ntBASIC1.67□□□□□ -2.14
SH3RF1Q7Z6J0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.67□□□□□ -2.14
SH3RF1Q7Z6J0 RNU7-119P-201ENST00000459279 63 ntBASIC1.66□□□□□ -2.14
SH3RF1Q7Z6J0 RNA5SP327-201ENST00000362494 101 ntBASIC1.65□□□□□ -2.15
SH3RF1Q7Z6J0 RNA5SP325-201ENST00000363756 130 ntBASIC1.65□□□□□ -2.15
SH3RF1Q7Z6J0 AL354695.1-201ENST00000427935 228 ntBASIC1.65□□□□□ -2.15
SH3RF1Q7Z6J0 RNU5B-6P-201ENST00000516765 68 ntBASIC1.65□□□□□ -2.15
SH3RF1Q7Z6J0 AC022709.1-201ENST00000615967 87 ntBASIC1.65□□□□□ -2.15
SH3RF1Q7Z6J0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
SH3RF1Q7Z6J0 Y_RNA.125-201ENST00000363371 111 ntBASIC1.64□□□□□ -2.15
SH3RF1Q7Z6J0 SNORA33.1-201ENST00000364957 130 ntBASIC1.64□□□□□ -2.15
SH3RF1Q7Z6J0 RNU6-716P-201ENST00000365621 103 ntBASIC1.64□□□□□ -2.15
SH3RF1Q7Z6J0 SNORA41B-201ENST00000384785 128 ntBASIC1.64□□□□□ -2.15
SH3RF1Q7Z6J0 RNA5SP61-201ENST00000516453 100 ntBASIC1.64□□□□□ -2.15
SH3RF1Q7Z6J0 SNORD18A-201ENST00000363753 72 ntBASIC1.63□□□□□ -2.15
SH3RF1Q7Z6J0 SNORA8.2-201ENST00000384372 139 ntBASIC1.63□□□□□ -2.15
SH3RF1Q7Z6J0 RNU6-35P-201ENST00000384530 107 ntBASIC1.63□□□□□ -2.15
SH3RF1Q7Z6J0 RNA5SP47-201ENST00000517230 109 ntBASIC1.63□□□□□ -2.15
SH3RF1Q7Z6J0 MIR3678-201ENST00000578455 94 ntBASIC1.63□□□□□ -2.15
SH3RF1Q7Z6J0 MIR6779-201ENST00000617283 64 ntBASIC1.63□□□□□ -2.15
SH3RF1Q7Z6J0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
SH3RF1Q7Z6J0 MIR200A-201ENST00000384875 90 ntBASIC1.62□□□□□ -2.15
SH3RF1Q7Z6J0 RNU6-269P-201ENST00000391077 97 ntBASIC1.62□□□□□ -2.15
SH3RF1Q7Z6J0 RNU6-231P-201ENST00000517122 103 ntBASIC1.62□□□□□ -2.15
SH3RF1Q7Z6J0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.62□□□□□ -2.15
SH3RF1Q7Z6J0 MIR573-201ENST00000384964 99 ntBASIC1.61□□□□□ -2.15
SH3RF1Q7Z6J0 MIR758-201ENST00000390227 88 ntBASIC1.61□□□□□ -2.15
SH3RF1Q7Z6J0 MIR3612-201ENST00000579753 87 ntBASIC1.61□□□□□ -2.15
SH3RF1Q7Z6J0 AC025627.3-201ENST00000582078 182 ntBASIC1.61□□□□□ -2.15
SH3RF1Q7Z6J0 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.61□□□□□ -2.15
SH3RF1Q7Z6J0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.61□□□□□ -2.15
SH3RF1Q7Z6J0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
SH3RF1Q7Z6J0 Y_RNA.246-201ENST00000364495 108 ntBASIC1.6□□□□□ -2.15
SH3RF1Q7Z6J0 Y_RNA.325-201ENST00000365171 122 ntBASIC1.6□□□□□ -2.15
SH3RF1Q7Z6J0 RNA5SP484-201ENST00000458857 111 ntBASIC1.6□□□□□ -2.15
SH3RF1Q7Z6J0 MIR6515-201ENST00000619843 57 ntBASIC1.6□□□□□ -2.15
SH3RF1Q7Z6J0 PVT1_3.1-201ENST00000620853 95 ntBASIC1.6□□□□□ -2.15
SH3RF1Q7Z6J0 SNORD114-26-201ENST00000363543 72 ntBASIC1.59□□□□□ -2.15
SH3RF1Q7Z6J0 RNU1-93P-201ENST00000364704 169 ntBASIC1.59□□□□□ -2.15
SH3RF1Q7Z6J0 MIR19B1-201ENST00000384829 87 ntBASIC1.59□□□□□ -2.15
SH3RF1Q7Z6J0 SCARNA17.3-201ENST00000516381 125 ntBASIC1.59□□□□□ -2.15
SH3RF1Q7Z6J0 MIR6078-201ENST00000611069 100 ntBASIC1.59□□□□□ -2.15
SH3RF1Q7Z6J0 RNU4-33P-201ENST00000364316 85 ntBASIC1.58□□□□□ -2.16
SH3RF1Q7Z6J0 SNORA63.6-201ENST00000364921 119 ntBASIC1.58□□□□□ -2.16
SH3RF1Q7Z6J0 MIR520E-201ENST00000384867 87 ntBASIC1.58□□□□□ -2.16
SH3RF1Q7Z6J0 RPS29P23-201ENST00000458635 123 ntBASIC1.58□□□□□ -2.16
SH3RF1Q7Z6J0 SCARNA16.5-201ENST00000517114 183 ntBASIC1.58□□□□□ -2.16
SH3RF1Q7Z6J0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
SH3RF1Q7Z6J0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.57□□□□□ -2.16
SH3RF1Q7Z6J0 SNORD114-27-201ENST00000363766 70 ntBASIC1.57□□□□□ -2.16
SH3RF1Q7Z6J0 RNU6-930P-201ENST00000390938 100 ntBASIC1.57□□□□□ -2.16
SH3RF1Q7Z6J0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.57□□□□□ -2.16
SH3RF1Q7Z6J0 AL162376.1-201ENST00000624117 175 ntBASIC1.57□□□□□ -2.16
SH3RF1Q7Z6J0 SNORD26-201ENST00000384147 75 ntBASIC1.56□□□□□ -2.16
SH3RF1Q7Z6J0 MIR548F3-201ENST00000408509 87 ntBASIC1.56□□□□□ -2.16
SH3RF1Q7Z6J0 RPS29P1-201ENST00000465274 159 ntBASIC1.56□□□□□ -2.16
SH3RF1Q7Z6J0 AC068338.1-201ENST00000565567 176 ntBASIC1.56□□□□□ -2.16
SH3RF1Q7Z6J0 MIR7974-201ENST00000615835 79 ntBASIC1.56□□□□□ -2.16
SH3RF1Q7Z6J0 MIR582-201ENST00000365731 98 ntBASIC1.55□□□□□ -2.16
SH3RF1Q7Z6J0 MIR652-201ENST00000385278 98 ntBASIC1.55□□□□□ -2.16
SH3RF1Q7Z6J0 RNU6-1246P-201ENST00000391064 107 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 205.6 ms