Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 MIR4744-201ENST00000581563 82 ntBASIC-1.77□□□□□ -2.69
CSPG4Q6UVK1 AC107308.1-201ENST00000615897 301 ntBASIC-1.77□□□□□ -2.69
CSPG4Q6UVK1 U2.7-201ENST00000619197 100 ntBASIC-1.77□□□□□ -2.69
CSPG4Q6UVK1 SNORD81.2-201ENST00000365153 76 ntBASIC-1.77□□□□□ -2.69
CSPG4Q6UVK1 SNORD116-29-201ENST00000384516 83 ntBASIC-1.77□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.77□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.77□□□□□ -2.69
CSPG4Q6UVK1 AC025253.1-201ENST00000613623 543 ntBASIC-1.77□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.77□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.77□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.77□□□□□ -2.69
CSPG4Q6UVK1 U4.4-201ENST00000620626 117 ntBASIC-1.77□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.77□□□□□ -2.69
CSPG4Q6UVK1 SNORA25.1-201ENST00000362326 128 ntBASIC-1.78□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.78□□□□□ -2.69
CSPG4Q6UVK1 RNU6-824P-201ENST00000363724 104 ntBASIC-1.78□□□□□ -2.69
CSPG4Q6UVK1 RNU6-694P-201ENST00000364071 147 ntBASIC-1.78□□□□□ -2.69
CSPG4Q6UVK1 SNORD18B-201ENST00000365659 72 ntBASIC-1.78□□□□□ -2.69
CSPG4Q6UVK1 RNU6-483P-201ENST00000384088 108 ntBASIC-1.78□□□□□ -2.69
CSPG4Q6UVK1 RNU6-314P-201ENST00000516574 104 ntBASIC-1.78□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.78□□□□□ -2.69
CSPG4Q6UVK1 RNY4P10-201ENST00000365571 96 ntBASIC-1.78□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.78□□□□□ -2.69
CSPG4Q6UVK1 RNU6-766P-201ENST00000362478 107 ntBASIC-1.79□□□□□ -2.7
CSPG4Q6UVK1 RNU6-247P-201ENST00000362636 107 ntBASIC-1.79□□□□□ -2.7
CSPG4Q6UVK1 RNU6-409P-201ENST00000384114 104 ntBASIC-1.79□□□□□ -2.7
CSPG4Q6UVK1 AC080013.6-201ENST00000606185 215 ntBASIC-1.79□□□□□ -2.7
CSPG4Q6UVK1 U2.18-201ENST00000622185 84 ntBASIC-1.79□□□□□ -2.7
CSPG4Q6UVK1 MIR577-201ENST00000385196 96 ntBASIC-1.79□□□□□ -2.7
CSPG4Q6UVK1 RNU6-121P-201ENST00000410525 99 ntBASIC-1.79□□□□□ -2.7
CSPG4Q6UVK1 RNU6-861P-201ENST00000516745 106 ntBASIC-1.79□□□□□ -2.7
CSPG4Q6UVK1 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.79□□□□□ -2.7
CSPG4Q6UVK1 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.79□□□□□ -2.7
CSPG4Q6UVK1 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.8□□□□□ -2.7
CSPG4Q6UVK1 RNU6-682P-201ENST00000363843 106 ntBASIC-1.8□□□□□ -2.7
CSPG4Q6UVK1 RNU6-681P-201ENST00000364012 104 ntBASIC-1.8□□□□□ -2.7
CSPG4Q6UVK1 SNORA40.4-201ENST00000390971 128 ntBASIC-1.8□□□□□ -2.7
CSPG4Q6UVK1 AC006362.1-201ENST00000567392 174 ntBASIC-1.8□□□□□ -2.7
CSPG4Q6UVK1 MIR3611-201ENST00000584484 83 ntBASIC-1.8□□□□□ -2.7
CSPG4Q6UVK1 Z99129.1-201ENST00000612510 255 ntBASIC-1.8□□□□□ -2.7
CSPG4Q6UVK1 RNU6-238P-201ENST00000363313 106 ntBASIC-1.8□□□□□ -2.7
CSPG4Q6UVK1 RNY1P1-201ENST00000364372 112 ntBASIC-1.8□□□□□ -2.7
CSPG4Q6UVK1 RNU6-995P-201ENST00000391244 107 ntBASIC-1.8□□□□□ -2.7
CSPG4Q6UVK1 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.8□□□□□ -2.7
CSPG4Q6UVK1 MIR5690-201ENST00000583739 73 ntBASIC-1.8□□□□□ -2.7
CSPG4Q6UVK1 AC119751.7-201ENST00000600494 245 ntBASIC-1.8□□□□□ -2.7
CSPG4Q6UVK1 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.81□□□□□ -2.7
CSPG4Q6UVK1 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.81□□□□□ -2.7
CSPG4Q6UVK1 RNU6-768P-201ENST00000384683 107 ntBASIC-1.81□□□□□ -2.7
CSPG4Q6UVK1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.81□□□□□ -2.7
CSPG4Q6UVK1 RNU6-649P-201ENST00000384463 107 ntBASIC-1.82□□□□□ -2.7
CSPG4Q6UVK1 RNU6-381P-201ENST00000391259 108 ntBASIC-1.82□□□□□ -2.7
CSPG4Q6UVK1 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.82□□□□□ -2.7
CSPG4Q6UVK1 RNU6-141P-201ENST00000410499 105 ntBASIC-1.82□□□□□ -2.7
CSPG4Q6UVK1 SNORA18.5-201ENST00000516616 101 ntBASIC-1.82□□□□□ -2.7
CSPG4Q6UVK1 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.82□□□□□ -2.7
CSPG4Q6UVK1 MIR429-201ENST00000362106 83 ntBASIC-1.83□□□□□ -2.7
CSPG4Q6UVK1 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.83□□□□□ -2.7
CSPG4Q6UVK1 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.83□□□□□ -2.7
CSPG4Q6UVK1 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.83□□□□□ -2.7
CSPG4Q6UVK1 RNU7-151P-201ENST00000516930 53 ntBASIC-1.83□□□□□ -2.7
CSPG4Q6UVK1 AC025166.1-201ENST00000612411 163 ntBASIC-1.83□□□□□ -2.7
CSPG4Q6UVK1 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.83□□□□□ -2.7
CSPG4Q6UVK1 Y_RNA.553-201ENST00000384670 102 ntBASIC-1.83□□□□□ -2.7
CSPG4Q6UVK1 MIR548N-201ENST00000408742 75 ntBASIC-1.83□□□□□ -2.7
CSPG4Q6UVK1 MIR3121-201ENST00000579680 77 ntBASIC-1.83□□□□□ -2.7
CSPG4Q6UVK1 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.84□□□□□ -2.7
CSPG4Q6UVK1 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.84□□□□□ -2.7
CSPG4Q6UVK1 RNU6-578P-201ENST00000390980 103 ntBASIC-1.84□□□□□ -2.7
CSPG4Q6UVK1 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.84□□□□□ -2.7
CSPG4Q6UVK1 MIR3149-201ENST00000584629 83 ntBASIC-1.84□□□□□ -2.7
CSPG4Q6UVK1 MTND1P29-201ENST00000448112 647 ntBASIC-1.84□□□□□ -2.7
CSPG4Q6UVK1 MIR5693-201ENST00000577722 73 ntBASIC-1.84□□□□□ -2.7
CSPG4Q6UVK1 MIR3646-201ENST00000578301 84 ntBASIC-1.84□□□□□ -2.7
CSPG4Q6UVK1 AC104985.2-201ENST00000620598 500 ntBASIC-1.84□□□□□ -2.7
CSPG4Q6UVK1 SNORD113-3-201ENST00000364830 72 ntBASIC-1.85□□□□□ -2.71
CSPG4Q6UVK1 MIR548D2-201ENST00000384955 97 ntBASIC-1.85□□□□□ -2.71
CSPG4Q6UVK1 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.85□□□□□ -2.71
CSPG4Q6UVK1 SNORD1B-201ENST00000363091 84 ntBASIC-1.85□□□□□ -2.71
CSPG4Q6UVK1 RNU6-698P-201ENST00000363523 107 ntBASIC-1.85□□□□□ -2.71
CSPG4Q6UVK1 RNU6-34P-201ENST00000364874 107 ntBASIC-1.85□□□□□ -2.71
CSPG4Q6UVK1 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.85□□□□□ -2.71
CSPG4Q6UVK1 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.86□□□□□ -2.71
CSPG4Q6UVK1 RNY4P14-201ENST00000363656 96 ntBASIC-1.86□□□□□ -2.71
CSPG4Q6UVK1 RNU6-340P-201ENST00000364005 107 ntBASIC-1.86□□□□□ -2.71
CSPG4Q6UVK1 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.86□□□□□ -2.71
CSPG4Q6UVK1 SNORD115-31-201ENST00000365318 82 ntBASIC-1.86□□□□□ -2.71
CSPG4Q6UVK1 RNU6-211P-201ENST00000384047 107 ntBASIC-1.86□□□□□ -2.71
CSPG4Q6UVK1 RNU6-519P-201ENST00000410590 108 ntBASIC-1.86□□□□□ -2.71
CSPG4Q6UVK1 AL121914.1-201ENST00000450188 156 ntBASIC-1.86□□□□□ -2.71
CSPG4Q6UVK1 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.86□□□□□ -2.71
CSPG4Q6UVK1 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.86□□□□□ -2.71
CSPG4Q6UVK1 DEFB108C-201ENST00000400154 252 ntBASIC-1.86□□□□□ -2.71
CSPG4Q6UVK1 MIR3613-201ENST00000579844 87 ntBASIC-1.86□□□□□ -2.71
CSPG4Q6UVK1 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.87□□□□□ -2.71
CSPG4Q6UVK1 SNORA7.5-201ENST00000410672 110 ntBASIC-1.87□□□□□ -2.71
CSPG4Q6UVK1 MIR548Z-201ENST00000584743 97 ntBASIC-1.87□□□□□ -2.71
CSPG4Q6UVK1 AC013734.1-201ENST00000619329 111 ntBASIC-1.87□□□□□ -2.71
CSPG4Q6UVK1 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.88□□□□□ -2.71
CSPG4Q6UVK1 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.88□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms