Protein–RNA interactions for Protein: Q3ZCT1

ZNF260, Zinc finger protein 260, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260Q3ZCT1 MIR7107-201ENST00000611489 80 ntBASIC0.72□□□□□ -2.29
ZNF260Q3ZCT1 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
ZNF260Q3ZCT1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.71□□□□□ -2.3
ZNF260Q3ZCT1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.71□□□□□ -2.3
ZNF260Q3ZCT1 RNU6-752P-201ENST00000516376 102 ntBASIC0.71□□□□□ -2.3
ZNF260Q3ZCT1 AC018659.1-201ENST00000551083 169 ntBASIC0.71□□□□□ -2.3
ZNF260Q3ZCT1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
ZNF260Q3ZCT1 RNU6-1039P-201ENST00000383931 107 ntBASIC0.7□□□□□ -2.3
ZNF260Q3ZCT1 SNORD45A-201ENST00000384512 84 ntBASIC0.7□□□□□ -2.3
ZNF260Q3ZCT1 RNU7-74P-201ENST00000459104 62 ntBASIC0.7□□□□□ -2.3
ZNF260Q3ZCT1 RNU6-274P-201ENST00000459566 107 ntBASIC0.7□□□□□ -2.3
ZNF260Q3ZCT1 SNORD116-24-201ENST00000384549 92 ntBASIC0.69□□□□□ -2.3
ZNF260Q3ZCT1 RNA5SP268-201ENST00000516828 124 ntBASIC0.69□□□□□ -2.3
ZNF260Q3ZCT1 MIR4698-201ENST00000577795 80 ntBASIC0.69□□□□□ -2.3
ZNF260Q3ZCT1 MIR3973-201ENST00000579824 107 ntBASIC0.69□□□□□ -2.3
ZNF260Q3ZCT1 MIR6515-201ENST00000619843 57 ntBASIC0.69□□□□□ -2.3
ZNF260Q3ZCT1 SNORD45.1-201ENST00000363181 77 ntBASIC0.68□□□□□ -2.3
ZNF260Q3ZCT1 RNU4-45P-201ENST00000365469 141 ntBASIC0.68□□□□□ -2.3
ZNF260Q3ZCT1 RNU6-604P-201ENST00000390917 100 ntBASIC0.68□□□□□ -2.3
ZNF260Q3ZCT1 RNU6-788P-201ENST00000390967 104 ntBASIC0.68□□□□□ -2.3
ZNF260Q3ZCT1 MIR548L-201ENST00000408303 86 ntBASIC0.68□□□□□ -2.3
ZNF260Q3ZCT1 RNU5B-6P-201ENST00000516765 68 ntBASIC0.68□□□□□ -2.3
ZNF260Q3ZCT1 MIR4460-201ENST00000577862 86 ntBASIC0.68□□□□□ -2.3
ZNF260Q3ZCT1 MIR373-201ENST00000362273 69 ntBASIC0.67□□□□□ -2.3
ZNF260Q3ZCT1 RNU6-990P-201ENST00000364385 104 ntBASIC0.67□□□□□ -2.3
ZNF260Q3ZCT1 RNA5SP517-201ENST00000364724 117 ntBASIC0.67□□□□□ -2.3
ZNF260Q3ZCT1 MIR154-201ENST00000385243 84 ntBASIC0.67□□□□□ -2.3
ZNF260Q3ZCT1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
ZNF260Q3ZCT1 RNA5SP222-201ENST00000411039 105 ntBASIC0.67□□□□□ -2.3
ZNF260Q3ZCT1 PSMC1P5-201ENST00000512850 177 ntBASIC0.67□□□□□ -2.3
ZNF260Q3ZCT1 RNU6-871P-201ENST00000516122 100 ntBASIC0.67□□□□□ -2.3
ZNF260Q3ZCT1 RNA5SP227-201ENST00000516184 113 ntBASIC0.67□□□□□ -2.3
ZNF260Q3ZCT1 MIR3657-201ENST00000584818 117 ntBASIC0.67□□□□□ -2.3
ZNF260Q3ZCT1 SNORA70.25-201ENST00000612741 95 ntBASIC0.67□□□□□ -2.3
ZNF260Q3ZCT1 AC022709.1-201ENST00000615967 87 ntBASIC0.67□□□□□ -2.3
ZNF260Q3ZCT1 AC069503.3-201ENST00000618674 145 ntBASIC0.67□□□□□ -2.3
ZNF260Q3ZCT1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.67□□□□□ -2.3
ZNF260Q3ZCT1 MIR203A-201ENST00000384836 110 ntBASIC0.66□□□□□ -2.3
ZNF260Q3ZCT1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.66□□□□□ -2.3
ZNF260Q3ZCT1 AL691482.2-201ENST00000457453 84 ntBASIC0.66□□□□□ -2.3
ZNF260Q3ZCT1 MIR548AE1-201ENST00000583292 70 ntBASIC0.66□□□□□ -2.3
ZNF260Q3ZCT1 SNORD113.1-201ENST00000363280 73 ntBASIC0.65□□□□□ -2.31
ZNF260Q3ZCT1 RNU6-590P-201ENST00000365039 107 ntBASIC0.65□□□□□ -2.31
ZNF260Q3ZCT1 MIR1265-201ENST00000408444 86 ntBASIC0.65□□□□□ -2.31
ZNF260Q3ZCT1 RNU6-982P-201ENST00000516216 102 ntBASIC0.65□□□□□ -2.31
ZNF260Q3ZCT1 CYP3A137P-201ENST00000562436 69 ntBASIC0.65□□□□□ -2.31
ZNF260Q3ZCT1 MIR4752-201ENST00000579672 72 ntBASIC0.65□□□□□ -2.31
ZNF260Q3ZCT1 MIR4653-201ENST00000585107 83 ntBASIC0.65□□□□□ -2.31
ZNF260Q3ZCT1 MIR6509-201ENST00000614603 85 ntBASIC0.65□□□□□ -2.31
ZNF260Q3ZCT1 MIR6866-201ENST00000638146 69 ntBASIC0.65□□□□□ -2.31
ZNF260Q3ZCT1 RNU6-110P-201ENST00000384508 104 ntBASIC0.64□□□□□ -2.31
ZNF260Q3ZCT1 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
ZNF260Q3ZCT1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.64□□□□□ -2.31
ZNF260Q3ZCT1 RNU6-881P-201ENST00000516813 102 ntBASIC0.64□□□□□ -2.31
ZNF260Q3ZCT1 MIR5000-201ENST00000577717 103 ntBASIC0.64□□□□□ -2.31
ZNF260Q3ZCT1 MIR8053-201ENST00000613344 75 ntBASIC0.64□□□□□ -2.31
ZNF260Q3ZCT1 U6.111-201ENST00000636093 83 ntBASIC0.64□□□□□ -2.31
ZNF260Q3ZCT1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
ZNF260Q3ZCT1 SNORD118-201ENST00000363593 134 ntBASIC0.63□□□□□ -2.31
ZNF260Q3ZCT1 RNU6-260P-201ENST00000384092 107 ntBASIC0.63□□□□□ -2.31
ZNF260Q3ZCT1 RNU6-649P-201ENST00000384463 107 ntBASIC0.63□□□□□ -2.31
ZNF260Q3ZCT1 MIR140-201ENST00000385282 100 ntBASIC0.63□□□□□ -2.31
ZNF260Q3ZCT1 AC073869.9-201ENST00000641610 120 ntBASIC0.63□□□□□ -2.31
ZNF260Q3ZCT1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
ZNF260Q3ZCT1 RNU6-663P-201ENST00000391105 106 ntBASIC0.62□□□□□ -2.31
ZNF260Q3ZCT1 HMGN2P22-201ENST00000427588 175 ntBASIC0.62□□□□□ -2.31
ZNF260Q3ZCT1 AC069271.1-201ENST00000445577 156 ntBASIC0.62□□□□□ -2.31
ZNF260Q3ZCT1 AC005520.4-201ENST00000604337 90 ntBASIC0.62□□□□□ -2.31
ZNF260Q3ZCT1 SNORA25.18-201ENST00000607153 114 ntBASIC0.62□□□□□ -2.31
ZNF260Q3ZCT1 SNORA2.1-201ENST00000363089 137 ntBASIC0.61□□□□□ -2.31
ZNF260Q3ZCT1 MIR582-201ENST00000365731 98 ntBASIC0.61□□□□□ -2.31
ZNF260Q3ZCT1 SNORA36.2-201ENST00000384004 127 ntBASIC0.61□□□□□ -2.31
ZNF260Q3ZCT1 MIR598-201ENST00000384868 97 ntBASIC0.61□□□□□ -2.31
ZNF260Q3ZCT1 MIR652-201ENST00000385278 98 ntBASIC0.61□□□□□ -2.31
ZNF260Q3ZCT1 SNORD30.1-201ENST00000391309 70 ntBASIC0.61□□□□□ -2.31
ZNF260Q3ZCT1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.61□□□□□ -2.31
ZNF260Q3ZCT1 AL109933.3-201ENST00000619095 188 ntBASIC0.61□□□□□ -2.31
ZNF260Q3ZCT1 RNU6-800P-201ENST00000384473 103 ntBASIC0.6□□□□□ -2.31
ZNF260Q3ZCT1 SNORD110-201ENST00000408189 75 ntBASIC0.6□□□□□ -2.31
ZNF260Q3ZCT1 RNU4-54P-201ENST00000516428 129 ntBASIC0.6□□□□□ -2.31
ZNF260Q3ZCT1 MIR6755-201ENST00000619993 66 ntBASIC0.6□□□□□ -2.31
ZNF260Q3ZCT1 MIR6835-201ENST00000621552 64 ntBASIC0.6□□□□□ -2.31
ZNF260Q3ZCT1 RNU6-1216P-201ENST00000362590 107 ntBASIC0.59□□□□□ -2.31
ZNF260Q3ZCT1 MIR7-2-201ENST00000384970 110 ntBASIC0.59□□□□□ -2.31
ZNF260Q3ZCT1 AC006210.1-201ENST00000424882 111 ntBASIC0.59□□□□□ -2.31
ZNF260Q3ZCT1 Y_RNA.633-201ENST00000459107 95 ntBASIC0.59□□□□□ -2.31
ZNF260Q3ZCT1 RNU6-1232P-201ENST00000516299 86 ntBASIC0.59□□□□□ -2.31
ZNF260Q3ZCT1 RNU6-656P-201ENST00000516785 107 ntBASIC0.59□□□□□ -2.31
ZNF260Q3ZCT1 AL590095.2-201ENST00000604136 117 ntBASIC0.59□□□□□ -2.31
ZNF260Q3ZCT1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.59□□□□□ -2.31
ZNF260Q3ZCT1 MIR6739-201ENST00000622461 75 ntBASIC0.59□□□□□ -2.31
ZNF260Q3ZCT1 Y_RNA.443-201ENST00000384135 111 ntBASIC0.58□□□□□ -2.32
ZNF260Q3ZCT1 SCARNA17.3-201ENST00000516381 125 ntBASIC0.58□□□□□ -2.32
ZNF260Q3ZCT1 RNA5SP147-201ENST00000516493 109 ntBASIC0.58□□□□□ -2.32
ZNF260Q3ZCT1 MIR4714-201ENST00000580728 77 ntBASIC0.58□□□□□ -2.32
ZNF260Q3ZCT1 MIR4473-201ENST00000583731 91 ntBASIC0.58□□□□□ -2.32
ZNF260Q3ZCT1 AC092634.7-201ENST00000621022 103 ntBASIC0.58□□□□□ -2.32
ZNF260Q3ZCT1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
ZNF260Q3ZCT1 RNU6-645P-201ENST00000364649 106 ntBASIC0.57□□□□□ -2.32
ZNF260Q3ZCT1 Y_RNA.407-201ENST00000383986 113 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms