Protein–RNA interactions for Protein: Q3SY46

KRTAP13-3, Keratin-associated protein 13-3, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP13-3Q3SY46 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
KRTAP13-3Q3SY46 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.64□□□□□ -2.31
KRTAP13-3Q3SY46 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
KRTAP13-3Q3SY46 SNORA9.1-201ENST00000362412 131 ntBASIC0.64□□□□□ -2.31
KRTAP13-3Q3SY46 SNORD111-201ENST00000408139 94 ntBASIC0.64□□□□□ -2.31
KRTAP13-3Q3SY46 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.64□□□□□ -2.31
KRTAP13-3Q3SY46 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.64□□□□□ -2.31
KRTAP13-3Q3SY46 MIR548AG1-201ENST00000579932 66 ntBASIC0.64□□□□□ -2.31
KRTAP13-3Q3SY46 MIR548AE1-201ENST00000583292 70 ntBASIC0.64□□□□□ -2.31
KRTAP13-3Q3SY46 AC103810.9-201ENST00000606688 112 ntBASIC0.64□□□□□ -2.31
KRTAP13-3Q3SY46 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.64□□□□□ -2.31
KRTAP13-3Q3SY46 RMST_2.1-201ENST00000617263 136 ntBASIC0.64□□□□□ -2.31
KRTAP13-3Q3SY46 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.64□□□□□ -2.31
KRTAP13-3Q3SY46 AC244669.1-204ENST00000621564 178 ntBASIC0.64□□□□□ -2.31
KRTAP13-3Q3SY46 AC090617.8-201ENST00000623339 167 ntBASIC0.64□□□□□ -2.31
KRTAP13-3Q3SY46 AC067863.3-201ENST00000624172 122 ntBASIC0.64□□□□□ -2.31
KRTAP13-3Q3SY46 RNA5SP327-201ENST00000362494 101 ntBASIC0.63□□□□□ -2.31
KRTAP13-3Q3SY46 MIR517B-201ENST00000385102 67 ntBASIC0.63□□□□□ -2.31
KRTAP13-3Q3SY46 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.63□□□□□ -2.31
KRTAP13-3Q3SY46 RNU6-269P-201ENST00000391077 97 ntBASIC0.63□□□□□ -2.31
KRTAP13-3Q3SY46 RNA5SP484-201ENST00000458857 111 ntBASIC0.63□□□□□ -2.31
KRTAP13-3Q3SY46 AC021146.9-201ENST00000512503 156 ntBASIC0.63□□□□□ -2.31
KRTAP13-3Q3SY46 MIR4460-201ENST00000577862 86 ntBASIC0.63□□□□□ -2.31
KRTAP13-3Q3SY46 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.62□□□□□ -2.31
KRTAP13-3Q3SY46 Y_RNA.125-201ENST00000363371 111 ntBASIC0.62□□□□□ -2.31
KRTAP13-3Q3SY46 RNU6-698P-201ENST00000363523 107 ntBASIC0.62□□□□□ -2.31
KRTAP13-3Q3SY46 RNU1-141P-201ENST00000364623 158 ntBASIC0.62□□□□□ -2.31
KRTAP13-3Q3SY46 RNU6-726P-201ENST00000364680 107 ntBASIC0.62□□□□□ -2.31
KRTAP13-3Q3SY46 RNU6-34P-201ENST00000364874 107 ntBASIC0.62□□□□□ -2.31
KRTAP13-3Q3SY46 RNU6-302P-201ENST00000365249 107 ntBASIC0.62□□□□□ -2.31
KRTAP13-3Q3SY46 SNORA80D-201ENST00000384488 135 ntBASIC0.62□□□□□ -2.31
KRTAP13-3Q3SY46 RNU6-939P-201ENST00000384634 107 ntBASIC0.62□□□□□ -2.31
KRTAP13-3Q3SY46 SNORD28-201ENST00000384706 75 ntBASIC0.62□□□□□ -2.31
KRTAP13-3Q3SY46 MIR521-2-201ENST00000384818 87 ntBASIC0.62□□□□□ -2.31
KRTAP13-3Q3SY46 SNORD41.1-201ENST00000391000 69 ntBASIC0.62□□□□□ -2.31
KRTAP13-3Q3SY46 AC087343.1-201ENST00000477341 475 ntBASIC0.62□□□□□ -2.31
KRTAP13-3Q3SY46 AC002350.1-201ENST00000490759 375 ntBASIC0.62□□□□□ -2.31
KRTAP13-3Q3SY46 SNORD79.1-201ENST00000516069 84 ntBASIC0.62□□□□□ -2.31
KRTAP13-3Q3SY46 RNU6-231P-201ENST00000517122 103 ntBASIC0.62□□□□□ -2.31
KRTAP13-3Q3SY46 SNORA70.22-201ENST00000517160 124 ntBASIC0.62□□□□□ -2.31
KRTAP13-3Q3SY46 SNORA40.16-201ENST00000517238 121 ntBASIC0.62□□□□□ -2.31
KRTAP13-3Q3SY46 MIR4295-201ENST00000585286 85 ntBASIC0.62□□□□□ -2.31
KRTAP13-3Q3SY46 MIR1-1-201ENST00000362147 71 ntBASIC0.61□□□□□ -2.31
KRTAP13-3Q3SY46 SNORD18A-201ENST00000363753 72 ntBASIC0.61□□□□□ -2.31
KRTAP13-3Q3SY46 Y_RNA.174-201ENST00000363781 105 ntBASIC0.61□□□□□ -2.31
KRTAP13-3Q3SY46 Y_RNA.224-201ENST00000364308 111 ntBASIC0.61□□□□□ -2.31
KRTAP13-3Q3SY46 MIR222-201ENST00000384992 110 ntBASIC0.61□□□□□ -2.31
KRTAP13-3Q3SY46 MIR652-201ENST00000385278 98 ntBASIC0.61□□□□□ -2.31
KRTAP13-3Q3SY46 MIR216B-201ENST00000390186 82 ntBASIC0.61□□□□□ -2.31
KRTAP13-3Q3SY46 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
KRTAP13-3Q3SY46 SNORD116.2-201ENST00000391251 93 ntBASIC0.61□□□□□ -2.31
KRTAP13-3Q3SY46 MIR548E-201ENST00000408287 88 ntBASIC0.61□□□□□ -2.31
KRTAP13-3Q3SY46 MIR548L-201ENST00000408303 86 ntBASIC0.61□□□□□ -2.31
KRTAP13-3Q3SY46 MIR1827-201ENST00000408549 66 ntBASIC0.61□□□□□ -2.31
KRTAP13-3Q3SY46 Y_RNA.633-201ENST00000459107 95 ntBASIC0.61□□□□□ -2.31
KRTAP13-3Q3SY46 MIR4452-201ENST00000583004 71 ntBASIC0.61□□□□□ -2.31
KRTAP13-3Q3SY46 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.61□□□□□ -2.31
KRTAP13-3Q3SY46 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.6□□□□□ -2.31
KRTAP13-3Q3SY46 MIR96-201ENST00000362288 78 ntBASIC0.6□□□□□ -2.31
KRTAP13-3Q3SY46 SNORD114-22-201ENST00000365423 72 ntBASIC0.6□□□□□ -2.31
KRTAP13-3Q3SY46 RNU6-1162P-201ENST00000384443 104 ntBASIC0.6□□□□□ -2.31
KRTAP13-3Q3SY46 RNU6-930P-201ENST00000390938 100 ntBASIC0.6□□□□□ -2.31
KRTAP13-3Q3SY46 MIR548F3-201ENST00000408509 87 ntBASIC0.6□□□□□ -2.31
KRTAP13-3Q3SY46 AC002429.1-201ENST00000437672 148 ntBASIC0.6□□□□□ -2.31
KRTAP13-3Q3SY46 RNU7-90P-201ENST00000459216 62 ntBASIC0.6□□□□□ -2.31
KRTAP13-3Q3SY46 MIR4473-201ENST00000583731 91 ntBASIC0.6□□□□□ -2.31
KRTAP13-3Q3SY46 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.6□□□□□ -2.31
KRTAP13-3Q3SY46 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
KRTAP13-3Q3SY46 SNORD114-27-201ENST00000363766 70 ntBASIC0.59□□□□□ -2.31
KRTAP13-3Q3SY46 RNU4-33P-201ENST00000364316 85 ntBASIC0.59□□□□□ -2.31
KRTAP13-3Q3SY46 Y_RNA.246-201ENST00000364495 108 ntBASIC0.59□□□□□ -2.31
KRTAP13-3Q3SY46 RNU1-93P-201ENST00000364704 169 ntBASIC0.59□□□□□ -2.31
KRTAP13-3Q3SY46 SNORD26-201ENST00000384147 75 ntBASIC0.59□□□□□ -2.31
KRTAP13-3Q3SY46 RNU6-520P-201ENST00000384717 104 ntBASIC0.59□□□□□ -2.31
KRTAP13-3Q3SY46 MIR545-201ENST00000385085 106 ntBASIC0.59□□□□□ -2.31
KRTAP13-3Q3SY46 SNORD89-201ENST00000390981 114 ntBASIC0.59□□□□□ -2.31
KRTAP13-3Q3SY46 U7.7-201ENST00000459276 60 ntBASIC0.59□□□□□ -2.31
KRTAP13-3Q3SY46 RNA5SP47-201ENST00000517230 109 ntBASIC0.59□□□□□ -2.31
KRTAP13-3Q3SY46 MIR4639-201ENST00000584938 69 ntBASIC0.59□□□□□ -2.31
KRTAP13-3Q3SY46 uc_338.10-201ENST00000621872 182 ntBASIC0.59□□□□□ -2.31
KRTAP13-3Q3SY46 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
KRTAP13-3Q3SY46 MIR26B-201ENST00000362251 77 ntBASIC0.58□□□□□ -2.32
KRTAP13-3Q3SY46 SNORA63.6-201ENST00000364921 119 ntBASIC0.58□□□□□ -2.32
KRTAP13-3Q3SY46 SNORA25-201ENST00000384384 134 ntBASIC0.58□□□□□ -2.32
KRTAP13-3Q3SY46 MIR4752-201ENST00000579672 72 ntBASIC0.58□□□□□ -2.32
KRTAP13-3Q3SY46 MIR6767-201ENST00000637302 66 ntBASIC0.58□□□□□ -2.32
KRTAP13-3Q3SY46 SNORD1B-201ENST00000363091 84 ntBASIC0.57□□□□□ -2.32
KRTAP13-3Q3SY46 SNORA36.1-201ENST00000363424 132 ntBASIC0.57□□□□□ -2.32
KRTAP13-3Q3SY46 RNU6-810P-201ENST00000364001 107 ntBASIC0.57□□□□□ -2.32
KRTAP13-3Q3SY46 Y_RNA.250-201ENST00000364542 110 ntBASIC0.57□□□□□ -2.32
KRTAP13-3Q3SY46 Y_RNA.282-201ENST00000364793 102 ntBASIC0.57□□□□□ -2.32
KRTAP13-3Q3SY46 RNU6-518P-201ENST00000516056 96 ntBASIC0.57□□□□□ -2.32
KRTAP13-3Q3SY46 SCARNA17.3-201ENST00000516381 125 ntBASIC0.57□□□□□ -2.32
KRTAP13-3Q3SY46 CYP3A54P-201ENST00000566950 75 ntBASIC0.57□□□□□ -2.32
KRTAP13-3Q3SY46 MIR3678-201ENST00000578455 94 ntBASIC0.57□□□□□ -2.32
KRTAP13-3Q3SY46 SNORD114-21-201ENST00000606412 72 ntBASIC0.57□□□□□ -2.32
KRTAP13-3Q3SY46 RNU6-986P-201ENST00000363133 102 ntBASIC0.56□□□□□ -2.32
KRTAP13-3Q3SY46 RNU4-38P-201ENST00000364472 129 ntBASIC0.56□□□□□ -2.32
KRTAP13-3Q3SY46 SNORA25.8-201ENST00000364831 128 ntBASIC0.56□□□□□ -2.32
KRTAP13-3Q3SY46 SNORD116-16-201ENST00000384533 92 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 263.5 ms