Protein–RNA interactions for Protein: Q1ZZU3

SWI5, DNA repair protein SWI5 homolog, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5Q1ZZU3 RNA5SP147-201ENST00000516493 109 ntBASIC1.25□□□□□ -2.21
SWI5Q1ZZU3 RNU6-726P-201ENST00000364680 107 ntBASIC1.24□□□□□ -2.21
SWI5Q1ZZU3 MIR7-2-201ENST00000384970 110 ntBASIC1.24□□□□□ -2.21
SWI5Q1ZZU3 SNORD41.1-201ENST00000391000 69 ntBASIC1.24□□□□□ -2.21
SWI5Q1ZZU3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.24□□□□□ -2.21
SWI5Q1ZZU3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.24□□□□□ -2.21
SWI5Q1ZZU3 RNU6-656P-201ENST00000516785 107 ntBASIC1.24□□□□□ -2.21
SWI5Q1ZZU3 SNORA40.17-201ENST00000517256 115 ntBASIC1.24□□□□□ -2.21
SWI5Q1ZZU3 MIR4421-201ENST00000578133 69 ntBASIC1.24□□□□□ -2.21
SWI5Q1ZZU3 OR2A41P-201ENST00000473586 105 ntBASIC1.23□□□□□ -2.21
SWI5Q1ZZU3 TRMT112P2-201ENST00000512910 132 ntBASIC1.23□□□□□ -2.21
SWI5Q1ZZU3 MIR7978-201ENST00000636158 59 ntBASIC1.23□□□□□ -2.21
SWI5Q1ZZU3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.22□□□□□ -2.21
SWI5Q1ZZU3 RNA5SP94-201ENST00000516917 108 ntBASIC1.22□□□□□ -2.21
SWI5Q1ZZU3 SNORA2.1-201ENST00000363089 137 ntBASIC1.21□□□□□ -2.22
SWI5Q1ZZU3 RNU6-1089P-201ENST00000516473 104 ntBASIC1.21□□□□□ -2.22
SWI5Q1ZZU3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.21□□□□□ -2.22
SWI5Q1ZZU3 RNA5SP215-201ENST00000363440 122 ntBASIC1.2□□□□□ -2.22
SWI5Q1ZZU3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.2□□□□□ -2.22
SWI5Q1ZZU3 RNA5SP268-201ENST00000516828 124 ntBASIC1.2□□□□□ -2.22
SWI5Q1ZZU3 Y_RNA.722-201ENST00000517279 114 ntBASIC1.2□□□□□ -2.22
SWI5Q1ZZU3 MIR548V-201ENST00000584165 80 ntBASIC1.2□□□□□ -2.22
SWI5Q1ZZU3 SNORD113-4-201ENST00000364802 75 ntBASIC1.19□□□□□ -2.22
SWI5Q1ZZU3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.19□□□□□ -2.22
SWI5Q1ZZU3 MIR608-201ENST00000384820 100 ntBASIC1.19□□□□□ -2.22
SWI5Q1ZZU3 SNORA75.1-201ENST00000391130 148 ntBASIC1.19□□□□□ -2.22
SWI5Q1ZZU3 ACA64.5-201ENST00000516207 127 ntBASIC1.19□□□□□ -2.22
SWI5Q1ZZU3 RNU6-122P-201ENST00000516818 107 ntBASIC1.19□□□□□ -2.22
SWI5Q1ZZU3 RNU6-92P-201ENST00000605893 104 ntBASIC1.19□□□□□ -2.22
SWI5Q1ZZU3 MIR6739-201ENST00000622461 75 ntBASIC1.19□□□□□ -2.22
SWI5Q1ZZU3 RNU6-392P-201ENST00000364926 101 ntBASIC1.18□□□□□ -2.22
SWI5Q1ZZU3 MT-TY-201ENST00000387409 66 ntBASIC1.18□□□□□ -2.22
SWI5Q1ZZU3 RNA5SP61-201ENST00000516453 100 ntBASIC1.18□□□□□ -2.22
SWI5Q1ZZU3 MIR4460-201ENST00000577862 86 ntBASIC1.18□□□□□ -2.22
SWI5Q1ZZU3 MIR3938-201ENST00000582157 103 ntBASIC1.18□□□□□ -2.22
SWI5Q1ZZU3 RNU6-936P-201ENST00000384005 107 ntBASIC1.17□□□□□ -2.22
SWI5Q1ZZU3 MIR548C-201ENST00000384815 97 ntBASIC1.17□□□□□ -2.22
SWI5Q1ZZU3 AL353770.2-201ENST00000620024 78 ntBASIC1.17□□□□□ -2.22
SWI5Q1ZZU3 MIR6828-201ENST00000636181 60 ntBASIC1.17□□□□□ -2.22
SWI5Q1ZZU3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
SWI5Q1ZZU3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SWI5Q1ZZU3 SNORA36.1-201ENST00000363424 132 ntBASIC1.16□□□□□ -2.22
SWI5Q1ZZU3 RNY1P8-201ENST00000383970 114 ntBASIC1.16□□□□□ -2.22
SWI5Q1ZZU3 MIR630-201ENST00000384957 97 ntBASIC1.16□□□□□ -2.22
SWI5Q1ZZU3 RNU6-269P-201ENST00000391077 97 ntBASIC1.16□□□□□ -2.22
SWI5Q1ZZU3 snoU13.13-201ENST00000458842 104 ntBASIC1.16□□□□□ -2.22
SWI5Q1ZZU3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.16□□□□□ -2.22
SWI5Q1ZZU3 RNU5B-6P-201ENST00000516765 68 ntBASIC1.16□□□□□ -2.22
SWI5Q1ZZU3 SNORD60.1-201ENST00000362451 73 ntBASIC1.15□□□□□ -2.23
SWI5Q1ZZU3 RNU1-141P-201ENST00000364623 158 ntBASIC1.15□□□□□ -2.23
SWI5Q1ZZU3 RNU6-302P-201ENST00000365249 107 ntBASIC1.15□□□□□ -2.23
SWI5Q1ZZU3 MIR140-201ENST00000385282 100 ntBASIC1.15□□□□□ -2.23
SWI5Q1ZZU3 AL157398.1-201ENST00000452981 186 ntBASIC1.15□□□□□ -2.23
SWI5Q1ZZU3 AC018659.1-201ENST00000551083 169 ntBASIC1.15□□□□□ -2.23
SWI5Q1ZZU3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
SWI5Q1ZZU3 SNORA8.2-201ENST00000384372 139 ntBASIC1.14□□□□□ -2.23
SWI5Q1ZZU3 RNU6-1162P-201ENST00000384443 104 ntBASIC1.14□□□□□ -2.23
SWI5Q1ZZU3 RNU6-808P-201ENST00000391233 108 ntBASIC1.14□□□□□ -2.23
SWI5Q1ZZU3 MIR3660-201ENST00000584845 100 ntBASIC1.14□□□□□ -2.23
SWI5Q1ZZU3 MIR758-201ENST00000390227 88 ntBASIC1.13□□□□□ -2.23
SWI5Q1ZZU3 RNA5SP247-201ENST00000411181 105 ntBASIC1.13□□□□□ -2.23
SWI5Q1ZZU3 MIR8070-201ENST00000616510 88 ntBASIC1.13□□□□□ -2.23
SWI5Q1ZZU3 Y_RNA.250-201ENST00000364542 110 ntBASIC1.12□□□□□ -2.23
SWI5Q1ZZU3 RNU6-1184P-201ENST00000384588 108 ntBASIC1.12□□□□□ -2.23
SWI5Q1ZZU3 MIR521-2-201ENST00000384818 87 ntBASIC1.12□□□□□ -2.23
SWI5Q1ZZU3 AC068338.1-201ENST00000565567 176 ntBASIC1.12□□□□□ -2.23
SWI5Q1ZZU3 MIR7107-201ENST00000611489 80 ntBASIC1.12□□□□□ -2.23
SWI5Q1ZZU3 SNORD114-4-201ENST00000363962 75 ntBASIC1.11□□□□□ -2.23
SWI5Q1ZZU3 RNA5SP484-201ENST00000458857 111 ntBASIC1.11□□□□□ -2.23
SWI5Q1ZZU3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.11□□□□□ -2.23
SWI5Q1ZZU3 AL162376.1-201ENST00000624117 175 ntBASIC1.11□□□□□ -2.23
SWI5Q1ZZU3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.1□□□□□ -2.23
SWI5Q1ZZU3 PSMC1P5-201ENST00000512850 177 ntBASIC1.1□□□□□ -2.23
SWI5Q1ZZU3 AC211469.2-201ENST00000605461 205 ntBASIC1.1□□□□□ -2.23
SWI5Q1ZZU3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SWI5Q1ZZU3 RNU6-1312P-201ENST00000362425 108 ntBASIC1.09□□□□□ -2.23
SWI5Q1ZZU3 MIR517B-201ENST00000385102 67 ntBASIC1.09□□□□□ -2.23
SWI5Q1ZZU3 MIR6078-201ENST00000611069 100 ntBASIC1.09□□□□□ -2.23
SWI5Q1ZZU3 U2.7-201ENST00000619197 100 ntBASIC1.09□□□□□ -2.23
SWI5Q1ZZU3 RNA5SP517-201ENST00000364724 117 ntBASIC1.08□□□□□ -2.24
SWI5Q1ZZU3 AC006210.1-201ENST00000424882 111 ntBASIC1.08□□□□□ -2.24
SWI5Q1ZZU3 AC021146.9-201ENST00000512503 156 ntBASIC1.08□□□□□ -2.24
SWI5Q1ZZU3 RNU7-174P-201ENST00000516248 59 ntBASIC1.08□□□□□ -2.24
SWI5Q1ZZU3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
SWI5Q1ZZU3 RNU6-698P-201ENST00000363523 107 ntBASIC1.07□□□□□ -2.24
SWI5Q1ZZU3 RNU6-34P-201ENST00000364874 107 ntBASIC1.07□□□□□ -2.24
SWI5Q1ZZU3 SNORA33.1-201ENST00000364957 130 ntBASIC1.07□□□□□ -2.24
SWI5Q1ZZU3 RNU6-110P-201ENST00000384508 104 ntBASIC1.07□□□□□ -2.24
SWI5Q1ZZU3 SNORD113-2-201ENST00000391082 72 ntBASIC1.07□□□□□ -2.24
SWI5Q1ZZU3 MIR1287-201ENST00000408492 90 ntBASIC1.07□□□□□ -2.24
SWI5Q1ZZU3 Y_RNA.633-201ENST00000459107 95 ntBASIC1.07□□□□□ -2.24
SWI5Q1ZZU3 U4.4-201ENST00000620626 117 ntBASIC1.07□□□□□ -2.24
SWI5Q1ZZU3 Y_RNA.125-201ENST00000363371 111 ntBASIC1.06□□□□□ -2.24
SWI5Q1ZZU3 MIR499A-201ENST00000384903 122 ntBASIC1.06□□□□□ -2.24
SWI5Q1ZZU3 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
SWI5Q1ZZU3 MIR1276-201ENST00000408707 83 ntBASIC1.06□□□□□ -2.24
SWI5Q1ZZU3 SNORA25.18-201ENST00000607153 114 ntBASIC1.06□□□□□ -2.24
SWI5Q1ZZU3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.06□□□□□ -2.24
SWI5Q1ZZU3 SNORA15B-2-201ENST00000384058 135 ntBASIC1.05□□□□□ -2.24
SWI5Q1ZZU3 SNORA15B-1-201ENST00000384334 135 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms