Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 RNU6-857P-201ENST00000515893 110 ntBASIC0.62□□□□□ -2.31
SF3B3Q15393 MIR4460-201ENST00000577862 86 ntBASIC0.62□□□□□ -2.31
SF3B3Q15393 YWHAEP2-201ENST00000580066 112 ntBASIC0.62□□□□□ -2.31
SF3B3Q15393 YWHAEP3-201ENST00000582767 121 ntBASIC0.62□□□□□ -2.31
SF3B3Q15393 RNU1-29P-201ENST00000606574 126 ntBASIC0.62□□□□□ -2.31
SF3B3Q15393 uc_338.17-201ENST00000619633 179 ntBASIC0.62□□□□□ -2.31
SF3B3Q15393 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
SF3B3Q15393 Y_RNA.12-201ENST00000362393 112 ntBASIC0.61□□□□□ -2.31
SF3B3Q15393 RNU6-824P-201ENST00000363724 104 ntBASIC0.61□□□□□ -2.31
SF3B3Q15393 Y_RNA.258-201ENST00000364613 105 ntBASIC0.61□□□□□ -2.31
SF3B3Q15393 AC069271.1-201ENST00000445577 156 ntBASIC0.61□□□□□ -2.31
SF3B3Q15393 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.61□□□□□ -2.31
SF3B3Q15393 NAMPTP3-201ENST00000569273 224 ntBASIC0.61□□□□□ -2.31
SF3B3Q15393 U6.81-201ENST00000612550 106 ntBASIC0.61□□□□□ -2.31
SF3B3Q15393 AC069503.3-201ENST00000618674 145 ntBASIC0.61□□□□□ -2.31
SF3B3Q15393 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
SF3B3Q15393 RNU6-1094P-201ENST00000362416 104 ntBASIC0.6□□□□□ -2.31
SF3B3Q15393 Y_RNA.532-201ENST00000384590 113 ntBASIC0.6□□□□□ -2.31
SF3B3Q15393 MIR4752-201ENST00000579672 72 ntBASIC0.6□□□□□ -2.31
SF3B3Q15393 RNU6-340P-201ENST00000364005 107 ntBASIC0.59□□□□□ -2.31
SF3B3Q15393 RNU6-54P-201ENST00000365563 107 ntBASIC0.59□□□□□ -2.31
SF3B3Q15393 RNU6V-201ENST00000384105 107 ntBASIC0.59□□□□□ -2.31
SF3B3Q15393 RNU6-24P-201ENST00000384440 107 ntBASIC0.59□□□□□ -2.31
SF3B3Q15393 SNORD71-201ENST00000411292 86 ntBASIC0.59□□□□□ -2.31
SF3B3Q15393 SNORA70.25-201ENST00000612741 95 ntBASIC0.59□□□□□ -2.31
SF3B3Q15393 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SF3B3Q15393 RNU6-495P-201ENST00000362995 107 ntBASIC0.58□□□□□ -2.32
SF3B3Q15393 Y_RNA.371-201ENST00000365591 113 ntBASIC0.58□□□□□ -2.32
SF3B3Q15393 RNU6-945P-201ENST00000383947 107 ntBASIC0.58□□□□□ -2.32
SF3B3Q15393 RNU6-380P-201ENST00000410207 107 ntBASIC0.58□□□□□ -2.32
SF3B3Q15393 AC114737.2-201ENST00000421583 173 ntBASIC0.58□□□□□ -2.32
SF3B3Q15393 AC074348.1-201ENST00000426503 132 ntBASIC0.58□□□□□ -2.32
SF3B3Q15393 RNU7-24P-201ENST00000458867 62 ntBASIC0.58□□□□□ -2.32
SF3B3Q15393 RNU6-303P-201ENST00000517091 106 ntBASIC0.58□□□□□ -2.32
SF3B3Q15393 RNU6-382P-201ENST00000365181 106 ntBASIC0.57□□□□□ -2.32
SF3B3Q15393 SNORD75.2-201ENST00000408784 58 ntBASIC0.57□□□□□ -2.32
SF3B3Q15393 AC006210.1-201ENST00000424882 111 ntBASIC0.57□□□□□ -2.32
SF3B3Q15393 AC018659.1-201ENST00000551083 169 ntBASIC0.57□□□□□ -2.32
SF3B3Q15393 SNORD110-201ENST00000408189 75 ntBASIC0.56□□□□□ -2.32
SF3B3Q15393 RNU6-638P-201ENST00000516582 104 ntBASIC0.56□□□□□ -2.32
SF3B3Q15393 RNU5B-6P-201ENST00000516765 68 ntBASIC0.56□□□□□ -2.32
SF3B3Q15393 MIR5706-201ENST00000579841 80 ntBASIC0.56□□□□□ -2.32
SF3B3Q15393 AC243829.6-201ENST00000612652 106 ntBASIC0.56□□□□□ -2.32
SF3B3Q15393 MIR1297-201ENST00000637311 77 ntBASIC0.56□□□□□ -2.32
SF3B3Q15393 MIR924-201ENST00000638017 53 ntBASIC0.56□□□□□ -2.32
SF3B3Q15393 RNU6-681P-201ENST00000364012 104 ntBASIC0.55□□□□□ -2.32
SF3B3Q15393 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
SF3B3Q15393 SNORD42B-201ENST00000458893 67 ntBASIC0.55□□□□□ -2.32
SF3B3Q15393 RNA5SP330-201ENST00000517096 96 ntBASIC0.55□□□□□ -2.32
SF3B3Q15393 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.55□□□□□ -2.32
SF3B3Q15393 MIR5087-201ENST00000635826 76 ntBASIC0.55□□□□□ -2.32
SF3B3Q15393 MIR330-201ENST00000362196 94 ntBASIC0.54□□□□□ -2.32
SF3B3Q15393 VTRNA1-3-201ENST00000365645 89 ntBASIC0.54□□□□□ -2.32
SF3B3Q15393 RNU6-848P-201ENST00000515948 107 ntBASIC0.54□□□□□ -2.32
SF3B3Q15393 RNU6-617P-201ENST00000516147 107 ntBASIC0.54□□□□□ -2.32
SF3B3Q15393 RNU6-473P-201ENST00000516164 107 ntBASIC0.54□□□□□ -2.32
SF3B3Q15393 RNU6-1049P-201ENST00000516414 107 ntBASIC0.54□□□□□ -2.32
SF3B3Q15393 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
SF3B3Q15393 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.54□□□□□ -2.32
SF3B3Q15393 MIR6755-201ENST00000619993 66 ntBASIC0.54□□□□□ -2.32
SF3B3Q15393 MIR4773-1-201ENST00000637203 78 ntBASIC0.54□□□□□ -2.32
SF3B3Q15393 RNA5SP457-201ENST00000363657 124 ntBASIC0.53□□□□□ -2.32
SF3B3Q15393 Y_RNA.244-201ENST00000364484 109 ntBASIC0.53□□□□□ -2.32
SF3B3Q15393 RNU6-154P-201ENST00000384306 106 ntBASIC0.53□□□□□ -2.32
SF3B3Q15393 RNU6-807P-201ENST00000516805 107 ntBASIC0.53□□□□□ -2.32
SF3B3Q15393 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
SF3B3Q15393 SNORD44.1-201ENST00000363202 61 ntBASIC0.52□□□□□ -2.33
SF3B3Q15393 SNORA2A-201ENST00000383885 135 ntBASIC0.52□□□□□ -2.33
SF3B3Q15393 HMGN2P22-201ENST00000427588 175 ntBASIC0.52□□□□□ -2.33
SF3B3Q15393 SCARNA18B-201ENST00000458806 135 ntBASIC0.52□□□□□ -2.33
SF3B3Q15393 RNU6-274P-201ENST00000459566 107 ntBASIC0.52□□□□□ -2.33
SF3B3Q15393 Y_RNA.423-201ENST00000384057 113 ntBASIC0.51□□□□□ -2.33
SF3B3Q15393 RNU6-863P-201ENST00000515989 104 ntBASIC0.51□□□□□ -2.33
SF3B3Q15393 MIR4484-201ENST00000582855 83 ntBASIC0.51□□□□□ -2.33
SF3B3Q15393 RNU6-330P-201ENST00000363015 107 ntBASIC0.5□□□□□ -2.33
SF3B3Q15393 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.5□□□□□ -2.33
SF3B3Q15393 SNORA68.3-201ENST00000515906 83 ntBASIC0.5□□□□□ -2.33
SF3B3Q15393 RNU6-1232P-201ENST00000516299 86 ntBASIC0.5□□□□□ -2.33
SF3B3Q15393 MIR4473-201ENST00000583731 91 ntBASIC0.5□□□□□ -2.33
SF3B3Q15393 Y_RNA.788-201ENST00000622394 112 ntBASIC0.5□□□□□ -2.33
SF3B3Q15393 Y_RNA.125-201ENST00000363371 111 ntBASIC0.49□□□□□ -2.33
SF3B3Q15393 Y_RNA.407-201ENST00000383986 113 ntBASIC0.49□□□□□ -2.33
SF3B3Q15393 RNU6-752P-201ENST00000516376 102 ntBASIC0.49□□□□□ -2.33
SF3B3Q15393 MIR548AE1-201ENST00000583292 70 ntBASIC0.49□□□□□ -2.33
SF3B3Q15393 AC145423.2-201ENST00000610631 239 ntBASIC0.49□□□□□ -2.33
SF3B3Q15393 MIR8087-201ENST00000612745 78 ntBASIC0.49□□□□□ -2.33
SF3B3Q15393 RNU6-1039P-201ENST00000383931 107 ntBASIC0.48□□□□□ -2.33
SF3B3Q15393 U7.6-201ENST00000610841 64 ntBASIC0.48□□□□□ -2.33
SF3B3Q15393 U7.4-201ENST00000614961 63 ntBASIC0.48□□□□□ -2.33
SF3B3Q15393 MIRLET7D-201ENST00000362263 87 ntBASIC0.47□□□□□ -2.33
SF3B3Q15393 SNORD114-4-201ENST00000363962 75 ntBASIC0.47□□□□□ -2.33
SF3B3Q15393 AL691482.2-201ENST00000457453 84 ntBASIC0.47□□□□□ -2.33
SF3B3Q15393 Y_RNA.115-201ENST00000363272 98 ntBASIC0.46□□□□□ -2.34
SF3B3Q15393 MIR652-201ENST00000385278 98 ntBASIC0.46□□□□□ -2.34
SF3B3Q15393 MIR760-201ENST00000390220 80 ntBASIC0.46□□□□□ -2.34
SF3B3Q15393 MIR103A1-201ENST00000362165 78 ntBASIC0.45□□□□□ -2.34
SF3B3Q15393 SNORA50A-201ENST00000384225 134 ntBASIC0.45□□□□□ -2.34
SF3B3Q15393 SNORA8.1-201ENST00000384250 140 ntBASIC0.45□□□□□ -2.34
SF3B3Q15393 MIR501-201ENST00000390204 84 ntBASIC0.45□□□□□ -2.34
SF3B3Q15393 MIR3134-201ENST00000579433 74 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 224.7 ms