Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RNU6-645P-201ENST00000364649 106 ntBASIC-1.08□□□□□ -2.58
HSPG2P98160 AC096644.2-201ENST00000429278 159 ntBASIC-1.08□□□□□ -2.58
HSPG2P98160 MTND3P2-201ENST00000438452 342 ntBASIC-1.08□□□□□ -2.58
HSPG2P98160 RNU6-451P-201ENST00000362921 107 ntBASIC-1.08□□□□□ -2.58
HSPG2P98160 SNORA63.7-201ENST00000365579 123 ntBASIC-1.08□□□□□ -2.58
HSPG2P98160 AC013734.1-201ENST00000619329 111 ntBASIC-1.08□□□□□ -2.58
HSPG2P98160 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.08□□□□□ -2.58
HSPG2P98160 RNA5SP106-201ENST00000517274 100 ntBASIC-1.08□□□□□ -2.58
HSPG2P98160 AC092794.1-201ENST00000612734 582 ntBASIC-1.08□□□□□ -2.58
HSPG2P98160 SNORD18C-201ENST00000362704 69 ntBASIC-1.09□□□□□ -2.58
HSPG2P98160 RNU6-151P-201ENST00000364158 107 ntBASIC-1.09□□□□□ -2.58
HSPG2P98160 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.09□□□□□ -2.58
HSPG2P98160 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.09□□□□□ -2.58
HSPG2P98160 RN7SKP298-201ENST00000515950 94 ntBASIC-1.09□□□□□ -2.58
HSPG2P98160 AC025166.1-201ENST00000612411 163 ntBASIC-1.09□□□□□ -2.58
HSPG2P98160 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.09□□□□□ -2.58
HSPG2P98160 SNORD81.2-201ENST00000365153 76 ntBASIC-1.09□□□□□ -2.58
HSPG2P98160 MIR559-201ENST00000385188 96 ntBASIC-1.09□□□□□ -2.58
HSPG2P98160 U6.81-201ENST00000612550 106 ntBASIC-1.09□□□□□ -2.58
HSPG2P98160 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.09□□□□□ -2.58
HSPG2P98160 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.09□□□□□ -2.58
HSPG2P98160 MIR548N-201ENST00000408742 75 ntBASIC-1.09□□□□□ -2.58
HSPG2P98160 RNU6-130P-201ENST00000411112 103 ntBASIC-1.09□□□□□ -2.58
HSPG2P98160 RPS29P30-201ENST00000600975 111 ntBASIC-1.09□□□□□ -2.58
HSPG2P98160 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.1□□□□□ -2.58
HSPG2P98160 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.1□□□□□ -2.58
HSPG2P98160 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.1□□□□□ -2.58
HSPG2P98160 RNU6-326P-201ENST00000365480 107 ntBASIC-1.1□□□□□ -2.58
HSPG2P98160 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-1.1□□□□□ -2.58
HSPG2P98160 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.1□□□□□ -2.58
HSPG2P98160 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.1□□□□□ -2.58
HSPG2P98160 U4.4-201ENST00000620626 117 ntBASIC-1.1□□□□□ -2.58
HSPG2P98160 RNU6-824P-201ENST00000363724 104 ntBASIC-1.1□□□□□ -2.59
HSPG2P98160 MIR548AA1-201ENST00000384971 97 ntBASIC-1.1□□□□□ -2.59
HSPG2P98160 RNU7-174P-201ENST00000516248 59 ntBASIC-1.1□□□□□ -2.59
HSPG2P98160 AC009094.1-201ENST00000564443 426 ntBASIC-1.1□□□□□ -2.59
HSPG2P98160 U6.97-201ENST00000636904 101 ntBASIC-1.1□□□□□ -2.59
HSPG2P98160 AC024614.3-201ENST00000637860 256 ntBASIC-1.1□□□□□ -2.59
HSPG2P98160 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.1□□□□□ -2.59
HSPG2P98160 MTND1P19-201ENST00000511780 315 ntBASIC-1.1□□□□□ -2.59
HSPG2P98160 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.1□□□□□ -2.59
HSPG2P98160 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.1□□□□□ -2.59
HSPG2P98160 RNU6-669P-201ENST00000365575 107 ntBASIC-1.1□□□□□ -2.59
HSPG2P98160 SNORD18B-201ENST00000365659 72 ntBASIC-1.1□□□□□ -2.59
HSPG2P98160 SNORD60-201ENST00000383903 83 ntBASIC-1.1□□□□□ -2.59
HSPG2P98160 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.1□□□□□ -2.59
HSPG2P98160 RNU6-912P-201ENST00000363800 104 ntBASIC-1.11□□□□□ -2.59
HSPG2P98160 RNU6-694P-201ENST00000364071 147 ntBASIC-1.11□□□□□ -2.59
HSPG2P98160 RNY4P18-201ENST00000391107 89 ntBASIC-1.11□□□□□ -2.59
HSPG2P98160 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.11□□□□□ -2.59
HSPG2P98160 SNORA18.5-201ENST00000516616 101 ntBASIC-1.11□□□□□ -2.59
HSPG2P98160 AC090574.1-201ENST00000623186 233 ntBASIC-1.11□□□□□ -2.59
HSPG2P98160 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.11□□□□□ -2.59
HSPG2P98160 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.11□□□□□ -2.59
HSPG2P98160 SNORD116-1-201ENST00000384335 95 ntBASIC-1.11□□□□□ -2.59
HSPG2P98160 RNU6-578P-201ENST00000390980 103 ntBASIC-1.11□□□□□ -2.59
HSPG2P98160 RNU6-361P-201ENST00000364454 107 ntBASIC-1.11□□□□□ -2.59
HSPG2P98160 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.11□□□□□ -2.59
HSPG2P98160 RNU6-483P-201ENST00000384088 108 ntBASIC-1.11□□□□□ -2.59
HSPG2P98160 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.11□□□□□ -2.59
HSPG2P98160 MIR548C-201ENST00000384815 97 ntBASIC-1.11□□□□□ -2.59
HSPG2P98160 DEFB108C-201ENST00000400154 252 ntBASIC-1.11□□□□□ -2.59
HSPG2P98160 MIR1255B1-201ENST00000636325 63 ntBASIC-1.11□□□□□ -2.59
HSPG2P98160 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 RNU6-290P-201ENST00000365212 101 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 RNU6-1042P-201ENST00000384204 107 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 RNU6-106P-201ENST00000384405 107 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 MIR122-201ENST00000385044 85 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 RNU6-971P-201ENST00000516920 106 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 AC002553.4-201ENST00000616896 331 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 AC104985.2-201ENST00000620598 500 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 RNU6-834P-201ENST00000362367 110 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 MTND1P29-201ENST00000448112 647 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 SNORA40.14-201ENST00000516543 86 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 RNU6-381P-201ENST00000391259 108 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 RNU7-160P-201ENST00000516660 62 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 MIR548V-201ENST00000584165 80 ntBASIC-1.12□□□□□ -2.59
HSPG2P98160 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.13□□□□□ -2.59
HSPG2P98160 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.13□□□□□ -2.59
HSPG2P98160 MIR577-201ENST00000385196 96 ntBASIC-1.13□□□□□ -2.59
HSPG2P98160 RNY4P25-201ENST00000459254 96 ntBASIC-1.13□□□□□ -2.59
HSPG2P98160 RNU6-698P-201ENST00000363523 107 ntBASIC-1.13□□□□□ -2.59
HSPG2P98160 RNU6-34P-201ENST00000364874 107 ntBASIC-1.13□□□□□ -2.59
HSPG2P98160 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.13□□□□□ -2.59
HSPG2P98160 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.13□□□□□ -2.59
HSPG2P98160 RNU6-587P-201ENST00000391282 106 ntBASIC-1.13□□□□□ -2.59
HSPG2P98160 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.13□□□□□ -2.59
HSPG2P98160 RNU6-699P-201ENST00000517081 110 ntBASIC-1.13□□□□□ -2.59
HSPG2P98160 SNORD116.3-201ENST00000517176 78 ntBASIC-1.13□□□□□ -2.59
HSPG2P98160 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.14□□□□□ -2.59
HSPG2P98160 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.14□□□□□ -2.59
HSPG2P98160 RNU6-800P-201ENST00000384473 103 ntBASIC-1.14□□□□□ -2.59
HSPG2P98160 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms