Protein–RNA interactions for Protein: P61568

ERVK11-1, Putative endogenous retrovirus group K member 11-1 Env polyprotein, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVK11-1P61568 RNU4-45P-201ENST00000365469 141 ntBASIC0.46□□□□□ -2.34
ERVK11-1P61568 U3.27-201ENST00000391237 200 ntBASIC0.46□□□□□ -2.34
ERVK11-1P61568 Y_RNA.606-201ENST00000410579 103 ntBASIC0.46□□□□□ -2.34
ERVK11-1P61568 HMGN2P22-201ENST00000427588 175 ntBASIC0.46□□□□□ -2.34
ERVK11-1P61568 SNORA68.3-201ENST00000515906 83 ntBASIC0.46□□□□□ -2.34
ERVK11-1P61568 RNU6-303P-201ENST00000517091 106 ntBASIC0.46□□□□□ -2.34
ERVK11-1P61568 MIR4460-201ENST00000577862 86 ntBASIC0.46□□□□□ -2.34
ERVK11-1P61568 MIR4473-201ENST00000583731 91 ntBASIC0.46□□□□□ -2.34
ERVK11-1P61568 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
ERVK11-1P61568 uc_338.17-201ENST00000619633 179 ntBASIC0.46□□□□□ -2.34
ERVK11-1P61568 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.46□□□□□ -2.34
ERVK11-1P61568 RNU6-776P-201ENST00000364403 104 ntBASIC0.45□□□□□ -2.34
ERVK11-1P61568 RNU6-1022P-201ENST00000365049 104 ntBASIC0.45□□□□□ -2.34
ERVK11-1P61568 RNY4P3-201ENST00000365254 95 ntBASIC0.45□□□□□ -2.34
ERVK11-1P61568 RNU2-59P-201ENST00000410482 191 ntBASIC0.45□□□□□ -2.34
ERVK11-1P61568 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.45□□□□□ -2.34
ERVK11-1P61568 Y_RNA.660-201ENST00000516002 120 ntBASIC0.45□□□□□ -2.34
ERVK11-1P61568 AC145423.2-201ENST00000610631 239 ntBASIC0.45□□□□□ -2.34
ERVK11-1P61568 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
ERVK11-1P61568 MIR103A1-201ENST00000362165 78 ntBASIC0.44□□□□□ -2.34
ERVK11-1P61568 RNU6-1094P-201ENST00000362416 104 ntBASIC0.44□□□□□ -2.34
ERVK11-1P61568 Y_RNA.36-201ENST00000362602 112 ntBASIC0.44□□□□□ -2.34
ERVK11-1P61568 MIR582-201ENST00000365731 98 ntBASIC0.44□□□□□ -2.34
ERVK11-1P61568 MIR518A1-201ENST00000385068 85 ntBASIC0.44□□□□□ -2.34
ERVK11-1P61568 SNORA40.8-201ENST00000411034 126 ntBASIC0.44□□□□□ -2.34
ERVK11-1P61568 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
ERVK11-1P61568 RNA5SP347-201ENST00000362445 119 ntBASIC0.43□□□□□ -2.34
ERVK11-1P61568 RNA5SP499-201ENST00000363982 119 ntBASIC0.43□□□□□ -2.34
ERVK11-1P61568 Y_RNA.423-201ENST00000384057 113 ntBASIC0.43□□□□□ -2.34
ERVK11-1P61568 SNORA8.1-201ENST00000384250 140 ntBASIC0.43□□□□□ -2.34
ERVK11-1P61568 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.43□□□□□ -2.34
ERVK11-1P61568 SNORD75.2-201ENST00000408784 58 ntBASIC0.43□□□□□ -2.34
ERVK11-1P61568 AC098934.3-201ENST00000430450 190 ntBASIC0.43□□□□□ -2.34
ERVK11-1P61568 snoU13.18-201ENST00000459483 104 ntBASIC0.43□□□□□ -2.34
ERVK11-1P61568 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.43□□□□□ -2.34
ERVK11-1P61568 AC069503.3-201ENST00000618674 145 ntBASIC0.43□□□□□ -2.34
ERVK11-1P61568 MIR6515-201ENST00000619843 57 ntBASIC0.43□□□□□ -2.34
ERVK11-1P61568 MIR5087-201ENST00000635826 76 ntBASIC0.43□□□□□ -2.34
ERVK11-1P61568 SNORD44.1-201ENST00000363202 61 ntBASIC0.42□□□□□ -2.34
ERVK11-1P61568 Y_RNA.118-201ENST00000363300 101 ntBASIC0.42□□□□□ -2.34
ERVK11-1P61568 Y_RNA.264-201ENST00000364665 102 ntBASIC0.42□□□□□ -2.34
ERVK11-1P61568 Y_RNA.355-201ENST00000365462 98 ntBASIC0.42□□□□□ -2.34
ERVK11-1P61568 Y_RNA.565-201ENST00000384719 101 ntBASIC0.42□□□□□ -2.34
ERVK11-1P61568 MIR652-201ENST00000385278 98 ntBASIC0.42□□□□□ -2.34
ERVK11-1P61568 SNORD110-201ENST00000408189 75 ntBASIC0.42□□□□□ -2.34
ERVK11-1P61568 AL157398.1-201ENST00000452981 186 ntBASIC0.42□□□□□ -2.34
ERVK11-1P61568 RNU6-863P-201ENST00000515989 104 ntBASIC0.42□□□□□ -2.34
ERVK11-1P61568 SNORD115-31-201ENST00000365318 82 ntBASIC0.41□□□□□ -2.34
ERVK11-1P61568 RNU6-1039P-201ENST00000383931 107 ntBASIC0.41□□□□□ -2.34
ERVK11-1P61568 MIR501-201ENST00000390204 84 ntBASIC0.41□□□□□ -2.34
ERVK11-1P61568 AC006210.1-201ENST00000424882 111 ntBASIC0.41□□□□□ -2.34
ERVK11-1P61568 RNU7-24P-201ENST00000458867 62 ntBASIC0.41□□□□□ -2.34
ERVK11-1P61568 RNU7-74P-201ENST00000459104 62 ntBASIC0.41□□□□□ -2.34
ERVK11-1P61568 RNU6-229P-201ENST00000516614 102 ntBASIC0.41□□□□□ -2.34
ERVK11-1P61568 U7.4-201ENST00000614961 63 ntBASIC0.41□□□□□ -2.34
ERVK11-1P61568 AC022709.1-201ENST00000615967 87 ntBASIC0.41□□□□□ -2.34
ERVK11-1P61568 SNORA2A-201ENST00000383885 135 ntBASIC0.4□□□□□ -2.35
ERVK11-1P61568 snoU13.13-201ENST00000458842 104 ntBASIC0.4□□□□□ -2.35
ERVK11-1P61568 RNU6-687P-201ENST00000516443 89 ntBASIC0.4□□□□□ -2.35
ERVK11-1P61568 RNU6-1015P-201ENST00000517121 99 ntBASIC0.4□□□□□ -2.35
ERVK11-1P61568 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
ERVK11-1P61568 RNU6-70P-201ENST00000516438 60 ntBASIC0.39□□□□□ -2.35
ERVK11-1P61568 RNA5SP147-201ENST00000516493 109 ntBASIC0.39□□□□□ -2.35
ERVK11-1P61568 MIR3657-201ENST00000584818 117 ntBASIC0.39□□□□□ -2.35
ERVK11-1P61568 MIR6509-201ENST00000614603 85 ntBASIC0.39□□□□□ -2.35
ERVK11-1P61568 SNORD115-22-201ENST00000364456 82 ntBASIC0.38□□□□□ -2.35
ERVK11-1P61568 RNU6-1241P-201ENST00000384536 107 ntBASIC0.38□□□□□ -2.35
ERVK11-1P61568 RNU6-604P-201ENST00000390917 100 ntBASIC0.38□□□□□ -2.35
ERVK11-1P61568 AL691482.2-201ENST00000457453 84 ntBASIC0.38□□□□□ -2.35
ERVK11-1P61568 RNU6-274P-201ENST00000459566 107 ntBASIC0.38□□□□□ -2.35
ERVK11-1P61568 RNA5SP436-201ENST00000516020 115 ntBASIC0.38□□□□□ -2.35
ERVK11-1P61568 RNU6-982P-201ENST00000516216 102 ntBASIC0.38□□□□□ -2.35
ERVK11-1P61568 MIR6513-201ENST00000621188 64 ntBASIC0.38□□□□□ -2.35
ERVK11-1P61568 MIR499B-201ENST00000636498 73 ntBASIC0.38□□□□□ -2.35
ERVK11-1P61568 AC073869.9-201ENST00000641610 120 ntBASIC0.38□□□□□ -2.35
ERVK11-1P61568 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
ERVK11-1P61568 Y_RNA.125-201ENST00000363371 111 ntBASIC0.37□□□□□ -2.35
ERVK11-1P61568 SNORD45A-201ENST00000384512 84 ntBASIC0.37□□□□□ -2.35
ERVK11-1P61568 MIR760-201ENST00000390220 80 ntBASIC0.37□□□□□ -2.35
ERVK11-1P61568 MIR548E-201ENST00000408287 88 ntBASIC0.37□□□□□ -2.35
ERVK11-1P61568 AC114737.2-201ENST00000421583 173 ntBASIC0.37□□□□□ -2.35
ERVK11-1P61568 MIR3675-201ENST00000583661 73 ntBASIC0.37□□□□□ -2.35
ERVK11-1P61568 MIR4677-201ENST00000584153 80 ntBASIC0.37□□□□□ -2.35
ERVK11-1P61568 MIR3925-201ENST00000584674 77 ntBASIC0.37□□□□□ -2.35
ERVK11-1P61568 MIR1297-201ENST00000637311 77 ntBASIC0.37□□□□□ -2.35
ERVK11-1P61568 MIRLET7D-201ENST00000362263 87 ntBASIC0.36□□□□□ -2.35
ERVK11-1P61568 RNU6-815P-201ENST00000384080 113 ntBASIC0.36□□□□□ -2.35
ERVK11-1P61568 MIR216B-201ENST00000390186 82 ntBASIC0.36□□□□□ -2.35
ERVK11-1P61568 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
ERVK11-1P61568 RNU6-807P-201ENST00000516805 107 ntBASIC0.36□□□□□ -2.35
ERVK11-1P61568 AC243829.3-201ENST00000622177 108 ntBASIC0.36□□□□□ -2.35
ERVK11-1P61568 MIR4662A-201ENST00000637499 67 ntBASIC0.36□□□□□ -2.35
ERVK11-1P61568 SNORD45.1-201ENST00000363181 77 ntBASIC0.35□□□□□ -2.35
ERVK11-1P61568 RNU6-1296P-201ENST00000383879 107 ntBASIC0.35□□□□□ -2.35
ERVK11-1P61568 Y_RNA.407-201ENST00000383986 113 ntBASIC0.35□□□□□ -2.35
ERVK11-1P61568 RNU6-260P-201ENST00000384092 107 ntBASIC0.35□□□□□ -2.35
ERVK11-1P61568 Y_RNA.545-201ENST00000384652 105 ntBASIC0.35□□□□□ -2.35
ERVK11-1P61568 MIR598-201ENST00000384868 97 ntBASIC0.35□□□□□ -2.35
ERVK11-1P61568 SNORA49-201ENST00000386157 136 ntBASIC0.35□□□□□ -2.35
ERVK11-1P61568 SNORD71-201ENST00000411292 86 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms