Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 MIR4473-201ENST00000583731 91 ntBASIC0.52□□□□□ -2.33
CLRN1P58418 U6.81-201ENST00000612550 106 ntBASIC0.52□□□□□ -2.33
CLRN1P58418 MIR4773-1-201ENST00000637203 78 ntBASIC0.52□□□□□ -2.33
CLRN1P58418 RNA5SP347-201ENST00000362445 119 ntBASIC0.51□□□□□ -2.33
CLRN1P58418 RNU6-495P-201ENST00000362995 107 ntBASIC0.51□□□□□ -2.33
CLRN1P58418 RNU6-340P-201ENST00000364005 107 ntBASIC0.51□□□□□ -2.33
CLRN1P58418 RNU6-382P-201ENST00000365181 106 ntBASIC0.51□□□□□ -2.33
CLRN1P58418 Y_RNA.606-201ENST00000410579 103 ntBASIC0.51□□□□□ -2.33
CLRN1P58418 RNA5SP225-201ENST00000410874 135 ntBASIC0.51□□□□□ -2.33
CLRN1P58418 RNU6-1232P-201ENST00000516299 86 ntBASIC0.51□□□□□ -2.33
CLRN1P58418 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
CLRN1P58418 MIR216A-201ENST00000385063 110 ntBASIC0.5□□□□□ -2.33
CLRN1P58418 SNORD75.2-201ENST00000408784 58 ntBASIC0.5□□□□□ -2.33
CLRN1P58418 HMGN2P22-201ENST00000427588 175 ntBASIC0.5□□□□□ -2.33
CLRN1P58418 SNORD42B-201ENST00000458893 67 ntBASIC0.5□□□□□ -2.33
CLRN1P58418 MIR5087-201ENST00000635826 76 ntBASIC0.5□□□□□ -2.33
CLRN1P58418 MIR103A1-201ENST00000362165 78 ntBASIC0.49□□□□□ -2.33
CLRN1P58418 RNU6-380P-201ENST00000410207 107 ntBASIC0.49□□□□□ -2.33
CLRN1P58418 RNU6-863P-201ENST00000515989 104 ntBASIC0.49□□□□□ -2.33
CLRN1P58418 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.49□□□□□ -2.33
CLRN1P58418 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
CLRN1P58418 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
CLRN1P58418 MIR6513-201ENST00000621188 64 ntBASIC0.49□□□□□ -2.33
CLRN1P58418 MIRLET7D-201ENST00000362263 87 ntBASIC0.48□□□□□ -2.33
CLRN1P58418 RNU6-1094P-201ENST00000362416 104 ntBASIC0.48□□□□□ -2.33
CLRN1P58418 MIR760-201ENST00000390220 80 ntBASIC0.48□□□□□ -2.33
CLRN1P58418 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.48□□□□□ -2.33
CLRN1P58418 RNU7-24P-201ENST00000458867 62 ntBASIC0.48□□□□□ -2.33
CLRN1P58418 RNU6-848P-201ENST00000515948 107 ntBASIC0.48□□□□□ -2.33
CLRN1P58418 RNU6-617P-201ENST00000516147 107 ntBASIC0.48□□□□□ -2.33
CLRN1P58418 RNU6-473P-201ENST00000516164 107 ntBASIC0.48□□□□□ -2.33
CLRN1P58418 RNU6-1049P-201ENST00000516414 107 ntBASIC0.48□□□□□ -2.33
CLRN1P58418 Y_RNA.685-201ENST00000516532 108 ntBASIC0.48□□□□□ -2.33
CLRN1P58418 RNU6-303P-201ENST00000517091 106 ntBASIC0.48□□□□□ -2.33
CLRN1P58418 Y_RNA.125-201ENST00000363371 111 ntBASIC0.47□□□□□ -2.33
CLRN1P58418 RNU6-681P-201ENST00000364012 104 ntBASIC0.47□□□□□ -2.33
CLRN1P58418 Y_RNA.407-201ENST00000383986 113 ntBASIC0.47□□□□□ -2.33
CLRN1P58418 Y_RNA.532-201ENST00000384590 113 ntBASIC0.47□□□□□ -2.33
CLRN1P58418 RNU6-1275P-201ENST00000391087 107 ntBASIC0.47□□□□□ -2.33
CLRN1P58418 RNU6-279P-201ENST00000391297 101 ntBASIC0.47□□□□□ -2.33
CLRN1P58418 RNA5SP480-201ENST00000516840 109 ntBASIC0.47□□□□□ -2.33
CLRN1P58418 MIR548AE1-201ENST00000583292 70 ntBASIC0.47□□□□□ -2.33
CLRN1P58418 U7.6-201ENST00000610841 64 ntBASIC0.47□□□□□ -2.33
CLRN1P58418 PVT1_3.1-201ENST00000620853 95 ntBASIC0.47□□□□□ -2.33
CLRN1P58418 RNU6-274P-201ENST00000459566 107 ntBASIC0.46□□□□□ -2.34
CLRN1P58418 RNU6-857P-201ENST00000515893 110 ntBASIC0.46□□□□□ -2.34
CLRN1P58418 RNA5SP395-201ENST00000516567 118 ntBASIC0.46□□□□□ -2.34
CLRN1P58418 RN7SL793P-201ENST00000583259 296 ntBASIC0.46□□□□□ -2.34
CLRN1P58418 SNORD114-26-201ENST00000363543 72 ntBASIC0.45□□□□□ -2.34
CLRN1P58418 MIR4484-201ENST00000582855 83 ntBASIC0.45□□□□□ -2.34
CLRN1P58418 uc_338.10-201ENST00000621872 182 ntBASIC0.45□□□□□ -2.34
CLRN1P58418 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
CLRN1P58418 RNA5SP128-201ENST00000365305 116 ntBASIC0.44□□□□□ -2.34
CLRN1P58418 MIR501-201ENST00000390204 84 ntBASIC0.44□□□□□ -2.34
CLRN1P58418 AL157398.1-201ENST00000452981 186 ntBASIC0.44□□□□□ -2.34
CLRN1P58418 RNU7-129P-201ENST00000516128 62 ntBASIC0.44□□□□□ -2.34
CLRN1P58418 RNU6-807P-201ENST00000516805 107 ntBASIC0.44□□□□□ -2.34
CLRN1P58418 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
CLRN1P58418 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
CLRN1P58418 SNORD114-23-201ENST00000363536 72 ntBASIC0.43□□□□□ -2.34
CLRN1P58418 RNU6-24P-201ENST00000384440 107 ntBASIC0.43□□□□□ -2.34
CLRN1P58418 MIR652-201ENST00000385278 98 ntBASIC0.43□□□□□ -2.34
CLRN1P58418 AC074348.1-201ENST00000426503 132 ntBASIC0.43□□□□□ -2.34
CLRN1P58418 AL691482.2-201ENST00000457453 84 ntBASIC0.43□□□□□ -2.34
CLRN1P58418 MIR499B-201ENST00000636498 73 ntBASIC0.43□□□□□ -2.34
CLRN1P58418 MIR1297-201ENST00000637311 77 ntBASIC0.43□□□□□ -2.34
CLRN1P58418 SNORD114-4-201ENST00000363962 75 ntBASIC0.42□□□□□ -2.34
CLRN1P58418 RNU6-154P-201ENST00000384306 106 ntBASIC0.42□□□□□ -2.34
CLRN1P58418 MIR936-201ENST00000401264 98 ntBASIC0.42□□□□□ -2.34
CLRN1P58418 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
CLRN1P58418 MIR4677-201ENST00000584153 80 ntBASIC0.42□□□□□ -2.34
CLRN1P58418 AC243829.3-201ENST00000622177 108 ntBASIC0.42□□□□□ -2.34
CLRN1P58418 RNU6-330P-201ENST00000363015 107 ntBASIC0.41□□□□□ -2.34
CLRN1P58418 RNU6-1039P-201ENST00000383931 107 ntBASIC0.41□□□□□ -2.34
CLRN1P58418 RNU6-815P-201ENST00000384080 113 ntBASIC0.41□□□□□ -2.34
CLRN1P58418 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
CLRN1P58418 SCARNA18B-201ENST00000458806 135 ntBASIC0.41□□□□□ -2.34
CLRN1P58418 SNORA9.1-201ENST00000362412 131 ntBASIC0.4□□□□□ -2.35
CLRN1P58418 RNA5SP62-201ENST00000363457 110 ntBASIC0.4□□□□□ -2.35
CLRN1P58418 RNA5SP499-201ENST00000363982 119 ntBASIC0.4□□□□□ -2.35
CLRN1P58418 MIR193B-201ENST00000384907 83 ntBASIC0.4□□□□□ -2.35
CLRN1P58418 MIR7-2-201ENST00000384970 110 ntBASIC0.4□□□□□ -2.35
CLRN1P58418 MIR516B1-201ENST00000385211 90 ntBASIC0.4□□□□□ -2.35
CLRN1P58418 AC073261.1-201ENST00000429409 121 ntBASIC0.4□□□□□ -2.35
CLRN1P58418 RNA5SP436-201ENST00000516020 115 ntBASIC0.4□□□□□ -2.35
CLRN1P58418 MIR548AD-201ENST00000584780 82 ntBASIC0.4□□□□□ -2.35
CLRN1P58418 MIR6509-201ENST00000614603 85 ntBASIC0.4□□□□□ -2.35
CLRN1P58418 AC010487.4-201ENST00000637027 61 ntBASIC0.4□□□□□ -2.35
CLRN1P58418 MIR203A-201ENST00000384836 110 ntBASIC0.39□□□□□ -2.35
CLRN1P58418 RNU6-752P-201ENST00000516376 102 ntBASIC0.39□□□□□ -2.35
CLRN1P58418 SCARNA17.3-201ENST00000516381 125 ntBASIC0.39□□□□□ -2.35
CLRN1P58418 RNU6-990P-201ENST00000364385 104 ntBASIC0.38□□□□□ -2.35
CLRN1P58418 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
CLRN1P58418 RNU6-260P-201ENST00000384092 107 ntBASIC0.37□□□□□ -2.35
CLRN1P58418 SNORA8.1-201ENST00000384250 140 ntBASIC0.37□□□□□ -2.35
CLRN1P58418 Y_RNA.540-201ENST00000384638 111 ntBASIC0.37□□□□□ -2.35
CLRN1P58418 MIR4711-201ENST00000578274 70 ntBASIC0.37□□□□□ -2.35
CLRN1P58418 AC243829.6-201ENST00000612652 106 ntBASIC0.37□□□□□ -2.35
CLRN1P58418 Y_RNA.788-201ENST00000622394 112 ntBASIC0.37□□□□□ -2.35
CLRN1P58418 Y_RNA.244-201ENST00000364484 109 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 221.9 ms