Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MIR3646-201ENST00000578301 84 ntBASIC-2.09□□□□□ -2.74
NUP98P52948 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.1□□□□□ -2.74
NUP98P52948 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.1□□□□□ -2.74
NUP98P52948 Z83846.1-201ENST00000446798 265 ntBASIC-2.1□□□□□ -2.74
NUP98P52948 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.1□□□□□ -2.75
NUP98P52948 RNY3P16-201ENST00000516338 101 ntBASIC-2.1□□□□□ -2.75
NUP98P52948 RNU6-258P-201ENST00000390884 101 ntBASIC-2.11□□□□□ -2.75
NUP98P52948 RNU6-1271P-201ENST00000517049 105 ntBASIC-2.11□□□□□ -2.75
NUP98P52948 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.11□□□□□ -2.75
NUP98P52948 RNU6-450P-201ENST00000364654 107 ntBASIC-2.12□□□□□ -2.75
NUP98P52948 SNORD50.2-201ENST00000365465 70 ntBASIC-2.12□□□□□ -2.75
NUP98P52948 RNY4P9-201ENST00000363194 97 ntBASIC-2.12□□□□□ -2.75
NUP98P52948 RNU6-990P-201ENST00000364385 104 ntBASIC-2.12□□□□□ -2.75
NUP98P52948 SNORA33.1-201ENST00000364957 130 ntBASIC-2.12□□□□□ -2.75
NUP98P52948 RNU6-409P-201ENST00000384114 104 ntBASIC-2.13□□□□□ -2.75
NUP98P52948 RNU6-876P-201ENST00000391295 104 ntBASIC-2.13□□□□□ -2.75
NUP98P52948 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.13□□□□□ -2.75
NUP98P52948 Y_RNA.210-201ENST00000364161 110 ntBASIC-2.14□□□□□ -2.75
NUP98P52948 SNORA7.5-201ENST00000410672 110 ntBASIC-2.14□□□□□ -2.75
NUP98P52948 SNORD19B-201ENST00000459623 84 ntBASIC-2.14□□□□□ -2.75
NUP98P52948 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.14□□□□□ -2.75
NUP98P52948 MIR548W-201ENST00000581970 74 ntBASIC-2.14□□□□□ -2.75
NUP98P52948 MIR3149-201ENST00000584629 83 ntBASIC-2.14□□□□□ -2.75
NUP98P52948 MIR6509-201ENST00000614603 85 ntBASIC-2.14□□□□□ -2.75
NUP98P52948 MIR1302-1-201ENST00000637932 143 ntBASIC-2.14□□□□□ -2.75
NUP98P52948 Y_RNA.75-201ENST00000362927 97 ntBASIC-2.14□□□□□ -2.75
NUP98P52948 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.14□□□□□ -2.75
NUP98P52948 FGF7P7-201ENST00000514120 227 ntBASIC-2.14□□□□□ -2.75
NUP98P52948 MIR6739-201ENST00000622461 75 ntBASIC-2.14□□□□□ -2.75
NUP98P52948 Y_RNA.155-201ENST00000363632 101 ntBASIC-2.15□□□□□ -2.75
NUP98P52948 MTATP6P29-201ENST00000415057 132 ntBASIC-2.15□□□□□ -2.75
NUP98P52948 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.16□□□□□ -2.76
NUP98P52948 MIR548U-201ENST00000390728 81 ntBASIC-2.16□□□□□ -2.76
NUP98P52948 SNORA75.5-201ENST00000391291 81 ntBASIC-2.16□□□□□ -2.76
NUP98P52948 RNU6-493P-201ENST00000391321 108 ntBASIC-2.16□□□□□ -2.76
NUP98P52948 snoU13.10-201ENST00000459301 103 ntBASIC-2.16□□□□□ -2.76
NUP98P52948 Y_RNA.276-201ENST00000364732 109 ntBASIC-2.17□□□□□ -2.76
NUP98P52948 RNU6-246P-201ENST00000384702 107 ntBASIC-2.17□□□□□ -2.76
NUP98P52948 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.17□□□□□ -2.76
NUP98P52948 MIR521-2-201ENST00000384818 87 ntBASIC-2.17□□□□□ -2.76
NUP98P52948 MIR203A-201ENST00000384836 110 ntBASIC-2.17□□□□□ -2.76
NUP98P52948 MIR548A1-201ENST00000385041 97 ntBASIC-2.17□□□□□ -2.76
NUP98P52948 RNU6-803P-201ENST00000516034 102 ntBASIC-2.17□□□□□ -2.76
NUP98P52948 RNA5SP147-201ENST00000516493 109 ntBASIC-2.17□□□□□ -2.76
NUP98P52948 MIR3121-201ENST00000579680 77 ntBASIC-2.17□□□□□ -2.76
NUP98P52948 RNU6-623P-201ENST00000363143 105 ntBASIC-2.17□□□□□ -2.76
NUP98P52948 Y_RNA.483-201ENST00000384380 101 ntBASIC-2.17□□□□□ -2.76
NUP98P52948 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.17□□□□□ -2.76
NUP98P52948 Y_RNA.237-201ENST00000364439 102 ntBASIC-2.18□□□□□ -2.76
NUP98P52948 RNU6-630P-201ENST00000391258 106 ntBASIC-2.18□□□□□ -2.76
NUP98P52948 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.18□□□□□ -2.76
NUP98P52948 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.18□□□□□ -2.76
NUP98P52948 MIR4643-201ENST00000577473 78 ntBASIC-2.18□□□□□ -2.76
NUP98P52948 Y_RNA.337-201ENST00000365312 102 ntBASIC-2.19□□□□□ -2.76
NUP98P52948 Y_RNA.396-201ENST00000383949 103 ntBASIC-2.19□□□□□ -2.76
NUP98P52948 Y_RNA.579-201ENST00000390939 94 ntBASIC-2.19□□□□□ -2.76
NUP98P52948 MIR548P-201ENST00000408336 84 ntBASIC-2.19□□□□□ -2.76
NUP98P52948 Y_RNA.690-201ENST00000516603 95 ntBASIC-2.19□□□□□ -2.76
NUP98P52948 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.19□□□□□ -2.76
NUP98P52948 MIR3140-201ENST00000583685 90 ntBASIC-2.19□□□□□ -2.76
NUP98P52948 Y_RNA.153-201ENST00000363615 91 ntBASIC-2.19□□□□□ -2.76
NUP98P52948 Y_RNA.213-201ENST00000364178 111 ntBASIC-2.19□□□□□ -2.76
NUP98P52948 RNU6-608P-201ENST00000383927 104 ntBASIC-2.2□□□□□ -2.76
NUP98P52948 RNU2-38P-201ENST00000410856 79 ntBASIC-2.2□□□□□ -2.76
NUP98P52948 FTX_4.1-201ENST00000616291 147 ntBASIC-2.2□□□□□ -2.76
NUP98P52948 U6.106-201ENST00000636360 105 ntBASIC-2.2□□□□□ -2.76
NUP98P52948 RNU6-230P-201ENST00000362457 104 ntBASIC-2.21□□□□□ -2.76
NUP98P52948 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.21□□□□□ -2.76
NUP98P52948 RNU6-563P-201ENST00000364872 108 ntBASIC-2.21□□□□□ -2.76
NUP98P52948 RNU6-275P-201ENST00000364910 107 ntBASIC-2.21□□□□□ -2.76
NUP98P52948 RNU6-132P-201ENST00000383863 107 ntBASIC-2.21□□□□□ -2.76
NUP98P52948 MT-TW-201ENST00000387382 68 ntBASIC-2.21□□□□□ -2.76
NUP98P52948 MTND1P19-201ENST00000511780 315 ntBASIC-2.21□□□□□ -2.76
NUP98P52948 Y_RNA.70-201ENST00000362886 110 ntBASIC-2.21□□□□□ -2.76
NUP98P52948 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.21□□□□□ -2.76
NUP98P52948 AL691482.2-201ENST00000457453 84 ntBASIC-2.21□□□□□ -2.76
NUP98P52948 RNU7-85P-201ENST00000458851 63 ntBASIC-2.21□□□□□ -2.76
NUP98P52948 MIR3657-201ENST00000584818 117 ntBASIC-2.21□□□□□ -2.76
NUP98P52948 RNU6-1009P-201ENST00000390996 107 ntBASIC-2.22□□□□□ -2.77
NUP98P52948 AC025521.1-201ENST00000621624 286 ntBASIC-2.22□□□□□ -2.77
NUP98P52948 Y_RNA.401-201ENST00000383965 117 ntBASIC-2.23□□□□□ -2.77
NUP98P52948 Y_RNA.527-201ENST00000384573 102 ntBASIC-2.23□□□□□ -2.77
NUP98P52948 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.23□□□□□ -2.77
NUP98P52948 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.23□□□□□ -2.77
NUP98P52948 Y_RNA.144-201ENST00000363521 113 ntBASIC-2.24□□□□□ -2.77
NUP98P52948 snoU13.17-201ENST00000458802 104 ntBASIC-2.24□□□□□ -2.77
NUP98P52948 RNU6-62P-201ENST00000516526 102 ntBASIC-2.24□□□□□ -2.77
NUP98P52948 AC113195.1-201ENST00000579952 141 ntBASIC-2.24□□□□□ -2.77
NUP98P52948 U2.14-201ENST00000615943 113 ntBASIC-2.24□□□□□ -2.77
NUP98P52948 SNORA24B-201ENST00000384176 131 ntBASIC-2.24□□□□□ -2.77
NUP98P52948 Y_RNA.455-201ENST00000384230 98 ntBASIC-2.24□□□□□ -2.77
NUP98P52948 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.24□□□□□ -2.77
NUP98P52948 RNU6-696P-201ENST00000390834 107 ntBASIC-2.24□□□□□ -2.77
NUP98P52948 AL513043.2-201ENST00000573941 143 ntBASIC-2.24□□□□□ -2.77
NUP98P52948 AC006254.2-201ENST00000603259 279 ntBASIC-2.24□□□□□ -2.77
NUP98P52948 Y_RNA.163-201ENST00000363702 113 ntBASIC-2.25□□□□□ -2.77
NUP98P52948 Y_RNA.395-201ENST00000383945 109 ntBASIC-2.25□□□□□ -2.77
NUP98P52948 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.25□□□□□ -2.77
NUP98P52948 RNA5SP136-201ENST00000410906 107 ntBASIC-2.25□□□□□ -2.77
NUP98P52948 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.25□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 212.3 ms