Protein–RNA interactions for Protein: P49754

VPS41, Vacuolar protein sorting-associated protein 41 homolog, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41P49754 RN7SL793P-201ENST00000583259 296 ntBASIC0.22□□□□□ -2.37
VPS41P49754 RNU6-979P-201ENST00000383896 107 ntBASIC0.21□□□□□ -2.38
VPS41P49754 MIR450A2-201ENST00000385022 100 ntBASIC0.21□□□□□ -2.38
VPS41P49754 MIR548H2-201ENST00000408874 88 ntBASIC0.21□□□□□ -2.38
VPS41P49754 IGLL4P-201ENST00000614590 133 ntBASIC0.21□□□□□ -2.38
VPS41P49754 uc_338.10-201ENST00000621872 182 ntBASIC0.21□□□□□ -2.38
VPS41P49754 SNORA42.1-201ENST00000363515 137 ntBASIC0.2□□□□□ -2.38
VPS41P49754 RNU7-24P-201ENST00000458867 62 ntBASIC0.2□□□□□ -2.38
VPS41P49754 AC097510.1-201ENST00000510945 133 ntBASIC0.2□□□□□ -2.38
VPS41P49754 RNU6-762P-201ENST00000517107 102 ntBASIC0.2□□□□□ -2.38
VPS41P49754 MIR5588-201ENST00000581890 63 ntBASIC0.2□□□□□ -2.38
VPS41P49754 RNU6-824P-201ENST00000363724 104 ntBASIC0.19□□□□□ -2.38
VPS41P49754 MIR516B1-201ENST00000385211 90 ntBASIC0.19□□□□□ -2.38
VPS41P49754 MIR652-201ENST00000385278 98 ntBASIC0.19□□□□□ -2.38
VPS41P49754 MIR876-201ENST00000401147 81 ntBASIC0.19□□□□□ -2.38
VPS41P49754 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
VPS41P49754 MIR494-201ENST00000349529 81 ntBASIC0.18□□□□□ -2.38
VPS41P49754 RNU6-652P-201ENST00000365488 107 ntBASIC0.18□□□□□ -2.38
VPS41P49754 RNU6-154P-201ENST00000384306 106 ntBASIC0.18□□□□□ -2.38
VPS41P49754 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
VPS41P49754 SNORD75.2-201ENST00000408784 58 ntBASIC0.18□□□□□ -2.38
VPS41P49754 SNORA62.5-201ENST00000516634 120 ntBASIC0.18□□□□□ -2.38
VPS41P49754 Y_RNA.36-201ENST00000362602 112 ntBASIC0.17□□□□□ -2.38
VPS41P49754 MIR643-201ENST00000385267 97 ntBASIC0.17□□□□□ -2.38
VPS41P49754 AC062037.1-201ENST00000605302 128 ntBASIC0.17□□□□□ -2.38
VPS41P49754 U6.81-201ENST00000612550 106 ntBASIC0.17□□□□□ -2.38
VPS41P49754 MIR193B-201ENST00000384907 83 ntBASIC0.16□□□□□ -2.38
VPS41P49754 SNORD77.2-201ENST00000391045 68 ntBASIC0.16□□□□□ -2.38
VPS41P49754 Y_RNA.607-201ENST00000410597 98 ntBASIC0.16□□□□□ -2.38
VPS41P49754 RNU7-171P-201ENST00000459581 62 ntBASIC0.16□□□□□ -2.38
VPS41P49754 AC022137.1-201ENST00000483735 151 ntBASIC0.16□□□□□ -2.38
VPS41P49754 RNU6-557P-201ENST00000516842 110 ntBASIC0.16□□□□□ -2.38
VPS41P49754 AC104408.1-201ENST00000605241 170 ntBASIC0.16□□□□□ -2.38
VPS41P49754 PVT1_3.1-201ENST00000620853 95 ntBASIC0.16□□□□□ -2.38
VPS41P49754 AC084368.1-201ENST00000620935 65 ntBASIC0.16□□□□□ -2.38
VPS41P49754 MIR924-201ENST00000638017 53 ntBASIC0.16□□□□□ -2.38
VPS41P49754 RNU6-208P-201ENST00000362431 107 ntBASIC0.15□□□□□ -2.39
VPS41P49754 SNORD73B-201ENST00000364394 72 ntBASIC0.15□□□□□ -2.39
VPS41P49754 RNU6-382P-201ENST00000365181 106 ntBASIC0.15□□□□□ -2.39
VPS41P49754 Y_RNA.426-201ENST00000384068 113 ntBASIC0.15□□□□□ -2.39
VPS41P49754 RNU6-820P-201ENST00000384273 107 ntBASIC0.15□□□□□ -2.39
VPS41P49754 Y_RNA.606-201ENST00000410579 103 ntBASIC0.15□□□□□ -2.39
VPS41P49754 RNU6-592P-201ENST00000411333 103 ntBASIC0.15□□□□□ -2.39
VPS41P49754 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.15□□□□□ -2.39
VPS41P49754 AL450471.1-201ENST00000447509 127 ntBASIC0.15□□□□□ -2.39
VPS41P49754 SCARNA17.3-201ENST00000516381 125 ntBASIC0.15□□□□□ -2.39
VPS41P49754 RNU7-188P-201ENST00000517063 64 ntBASIC0.15□□□□□ -2.39
VPS41P49754 SCARNA11.2-201ENST00000517183 154 ntBASIC0.15□□□□□ -2.39
VPS41P49754 RNA5SP214-201ENST00000363378 118 ntBASIC0.14□□□□□ -2.39
VPS41P49754 SNORD114-9-201ENST00000364370 72 ntBASIC0.14□□□□□ -2.39
VPS41P49754 MIR489-201ENST00000384923 84 ntBASIC0.14□□□□□ -2.39
VPS41P49754 SNORA75.1-201ENST00000391130 148 ntBASIC0.14□□□□□ -2.39
VPS41P49754 Y_RNA.660-201ENST00000516002 120 ntBASIC0.14□□□□□ -2.39
VPS41P49754 RNU6-1108P-201ENST00000516308 104 ntBASIC0.14□□□□□ -2.39
VPS41P49754 AC006254.2-201ENST00000603259 279 ntBASIC0.14□□□□□ -2.39
VPS41P49754 RNU6-478P-201ENST00000363904 110 ntBASIC0.13□□□□□ -2.39
VPS41P49754 SNORD114-4-201ENST00000363962 75 ntBASIC0.13□□□□□ -2.39
VPS41P49754 RNU6-175P-201ENST00000516896 107 ntBASIC0.13□□□□□ -2.39
VPS41P49754 MIR4743-201ENST00000584576 69 ntBASIC0.13□□□□□ -2.39
VPS41P49754 RN7SL660P-201ENST00000614852 299 ntBASIC0.13□□□□□ -2.39
VPS41P49754 RNA5SP325-201ENST00000363756 130 ntBASIC0.12□□□□□ -2.39
VPS41P49754 Y_RNA.264-201ENST00000364665 102 ntBASIC0.12□□□□□ -2.39
VPS41P49754 RNU6-1152P-201ENST00000384576 107 ntBASIC0.12□□□□□ -2.39
VPS41P49754 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
VPS41P49754 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
VPS41P49754 SNORD114-29-201ENST00000364819 70 ntBASIC0.11□□□□□ -2.39
VPS41P49754 MIR1273G-201ENST00000577677 100 ntBASIC0.11□□□□□ -2.39
VPS41P49754 MIR4514-201ENST00000581410 57 ntBASIC0.11□□□□□ -2.39
VPS41P49754 MIR4773-1-201ENST00000637203 78 ntBASIC0.11□□□□□ -2.39
VPS41P49754 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.1□□□□□ -2.39
VPS41P49754 MIR20A-201ENST00000362279 71 ntBASIC0.1□□□□□ -2.39
VPS41P49754 RNU6-340P-201ENST00000364005 107 ntBASIC0.1□□□□□ -2.39
VPS41P49754 MIR582-201ENST00000365731 98 ntBASIC0.1□□□□□ -2.39
VPS41P49754 MIR610-201ENST00000385139 96 ntBASIC0.1□□□□□ -2.39
VPS41P49754 RNU6-129P-201ENST00000391022 107 ntBASIC0.1□□□□□ -2.39
VPS41P49754 AC244090.1-201ENST00000441884 93 ntBASIC0.1□□□□□ -2.39
VPS41P49754 RNU6-180P-201ENST00000516697 61 ntBASIC0.1□□□□□ -2.39
VPS41P49754 YWHAEP3-201ENST00000582767 121 ntBASIC0.1□□□□□ -2.39
VPS41P49754 MIR4679-1-201ENST00000637619 75 ntBASIC0.1□□□□□ -2.39
VPS41P49754 Y_RNA.12-201ENST00000362393 112 ntBASIC0.09□□□□□ -2.4
VPS41P49754 Y_RNA.316-201ENST00000365118 111 ntBASIC0.09□□□□□ -2.4
VPS41P49754 RNU6-1276P-201ENST00000365372 104 ntBASIC0.09□□□□□ -2.4
VPS41P49754 MIR145-201ENST00000384967 88 ntBASIC0.09□□□□□ -2.4
VPS41P49754 MIR892B-201ENST00000401279 77 ntBASIC0.09□□□□□ -2.4
VPS41P49754 MIR548E-201ENST00000408287 88 ntBASIC0.09□□□□□ -2.4
VPS41P49754 AC023932.2-201ENST00000603176 175 ntBASIC0.09□□□□□ -2.4
VPS41P49754 MIRLET7A1-201ENST00000362295 80 ntBASIC0.08□□□□□ -2.4
VPS41P49754 RNU6-686P-201ENST00000364839 107 ntBASIC0.08□□□□□ -2.4
VPS41P49754 Y_RNA.371-201ENST00000365591 113 ntBASIC0.08□□□□□ -2.4
VPS41P49754 MIR593-201ENST00000384856 100 ntBASIC0.08□□□□□ -2.4
VPS41P49754 RNY4P29-201ENST00000410801 97 ntBASIC0.08□□□□□ -2.4
VPS41P49754 SNORA40.17-201ENST00000517256 115 ntBASIC0.08□□□□□ -2.4
VPS41P49754 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.08□□□□□ -2.4
VPS41P49754 RNU6-1039P-201ENST00000383931 107 ntBASIC0.07□□□□□ -2.4
VPS41P49754 MIR106A-201ENST00000384870 81 ntBASIC0.07□□□□□ -2.4
VPS41P49754 MIR4666B-201ENST00000578142 81 ntBASIC0.07□□□□□ -2.4
VPS41P49754 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
VPS41P49754 SNORD114-5-201ENST00000362928 70 ntBASIC0.06□□□□□ -2.4
VPS41P49754 RNU6-990P-201ENST00000364385 104 ntBASIC0.06□□□□□ -2.4
VPS41P49754 Y_RNA.388-201ENST00000383919 113 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 224.4 ms