Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-2.12□□□□□ -2.75
HTTP42858 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.12□□□□□ -2.75
HTTP42858 Y_RNA.455-201ENST00000384230 98 ntBASIC-2.12□□□□□ -2.75
HTTP42858 SNORA18.6-201ENST00000516792 115 ntBASIC-2.12□□□□□ -2.75
HTTP42858 RNU6-507P-201ENST00000516045 100 ntBASIC-2.13□□□□□ -2.75
HTTP42858 AC068137.3-201ENST00000639191 341 ntBASIC-2.13□□□□□ -2.75
HTTP42858 RNU6-1272P-201ENST00000362776 107 ntBASIC-2.13□□□□□ -2.75
HTTP42858 RNU6-648P-201ENST00000410190 107 ntBASIC-2.13□□□□□ -2.75
HTTP42858 MIR548Z-201ENST00000584743 97 ntBASIC-2.13□□□□□ -2.75
HTTP42858 SNORD116-10-201ENST00000363791 102 ntBASIC-2.14□□□□□ -2.75
HTTP42858 SNORD45B-201ENST00000364617 72 ntBASIC-2.14□□□□□ -2.75
HTTP42858 Y_RNA.615-201ENST00000410769 117 ntBASIC-2.14□□□□□ -2.75
HTTP42858 SNORD116-1-201ENST00000384335 95 ntBASIC-2.14□□□□□ -2.75
HTTP42858 AL121914.1-201ENST00000450188 156 ntBASIC-2.14□□□□□ -2.75
HTTP42858 MIR3163-201ENST00000581592 73 ntBASIC-2.14□□□□□ -2.75
HTTP42858 U2.1-201ENST00000618978 145 ntBASIC-2.14□□□□□ -2.75
HTTP42858 MIR3662-201ENST00000637030 95 ntBASIC-2.14□□□□□ -2.75
HTTP42858 RNU6-587P-201ENST00000391282 106 ntBASIC-2.15□□□□□ -2.75
HTTP42858 RNY4P20-201ENST00000516678 93 ntBASIC-2.15□□□□□ -2.75
HTTP42858 Y_RNA.163-201ENST00000363702 113 ntBASIC-2.15□□□□□ -2.75
HTTP42858 RNU6-593P-201ENST00000364716 112 ntBASIC-2.15□□□□□ -2.75
HTTP42858 Y_RNA.339-201ENST00000365325 102 ntBASIC-2.15□□□□□ -2.75
HTTP42858 SNORA69.1-201ENST00000390904 137 ntBASIC-2.15□□□□□ -2.75
HTTP42858 RNU6-554P-201ENST00000410466 106 ntBASIC-2.15□□□□□ -2.75
HTTP42858 RNA5SP136-201ENST00000410906 107 ntBASIC-2.15□□□□□ -2.75
HTTP42858 RNU6-590P-201ENST00000365039 107 ntBASIC-2.15□□□□□ -2.75
HTTP42858 Y_RNA.137-201ENST00000363455 112 ntBASIC-2.16□□□□□ -2.75
HTTP42858 RNU6-867P-201ENST00000364956 107 ntBASIC-2.16□□□□□ -2.75
HTTP42858 MIR4426-201ENST00000640330 63 ntBASIC-2.16□□□□□ -2.75
HTTP42858 RNU6-500P-201ENST00000362349 107 ntBASIC-2.16□□□□□ -2.76
HTTP42858 SNORD18B-201ENST00000365659 72 ntBASIC-2.16□□□□□ -2.76
HTTP42858 Y_RNA.414-201ENST00000384011 101 ntBASIC-2.16□□□□□ -2.76
HTTP42858 RNU6-373P-201ENST00000411247 98 ntBASIC-2.16□□□□□ -2.76
HTTP42858 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.16□□□□□ -2.76
HTTP42858 SNORA25.1-201ENST00000362326 128 ntBASIC-2.17□□□□□ -2.76
HTTP42858 Y_RNA.445-201ENST00000384168 102 ntBASIC-2.17□□□□□ -2.76
HTTP42858 RNU6-297P-201ENST00000384636 107 ntBASIC-2.17□□□□□ -2.76
HTTP42858 RNU6-982P-201ENST00000516216 102 ntBASIC-2.17□□□□□ -2.76
HTTP42858 RNU7-160P-201ENST00000516660 62 ntBASIC-2.17□□□□□ -2.76
HTTP42858 RNU6-176P-201ENST00000517196 105 ntBASIC-2.17□□□□□ -2.76
HTTP42858 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.17□□□□□ -2.76
HTTP42858 RNU6-211P-201ENST00000384047 107 ntBASIC-2.17□□□□□ -2.76
HTTP42858 Y_RNA.663-201ENST00000516043 101 ntBASIC-2.17□□□□□ -2.76
HTTP42858 RNU6-120P-201ENST00000516077 103 ntBASIC-2.17□□□□□ -2.76
HTTP42858 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-2.17□□□□□ -2.76
HTTP42858 MIR6863-201ENST00000636112 90 ntBASIC-2.17□□□□□ -2.76
HTTP42858 RNA5SP215-201ENST00000363440 122 ntBASIC-2.17□□□□□ -2.76
HTTP42858 Y_RNA.155-201ENST00000363632 101 ntBASIC-2.17□□□□□ -2.76
HTTP42858 RNU6-1113P-201ENST00000384348 107 ntBASIC-2.17□□□□□ -2.76
HTTP42858 MIR1236-201ENST00000408340 102 ntBASIC-2.17□□□□□ -2.76
HTTP42858 Y_RNA.592-201ENST00000410274 109 ntBASIC-2.17□□□□□ -2.76
HTTP42858 Y_RNA.713-201ENST00000517013 96 ntBASIC-2.17□□□□□ -2.76
HTTP42858 MIR4439-201ENST00000583746 80 ntBASIC-2.17□□□□□ -2.76
HTTP42858 MIR616-201ENST00000385293 97 ntBASIC-2.18□□□□□ -2.76
HTTP42858 MIR548F5-201ENST00000408421 86 ntBASIC-2.18□□□□□ -2.76
HTTP42858 RNU6-1068P-201ENST00000410958 103 ntBASIC-2.18□□□□□ -2.76
HTTP42858 U8.20-201ENST00000459445 131 ntBASIC-2.18□□□□□ -2.76
HTTP42858 RNU7-4P-201ENST00000516961 62 ntBASIC-2.18□□□□□ -2.76
HTTP42858 AP003461.1-201ENST00000528866 78 ntBASIC-2.18□□□□□ -2.76
HTTP42858 MIR7110-201ENST00000612638 86 ntBASIC-2.18□□□□□ -2.76
HTTP42858 MIR6128-201ENST00000615528 109 ntBASIC-2.18□□□□□ -2.76
HTTP42858 SNORD113-8-201ENST00000363497 74 ntBASIC-2.19□□□□□ -2.76
HTTP42858 RNU6-103P-201ENST00000363686 107 ntBASIC-2.19□□□□□ -2.76
HTTP42858 Y_RNA.594-201ENST00000410373 140 ntBASIC-2.19□□□□□ -2.76
HTTP42858 RNU6-256P-201ENST00000516747 97 ntBASIC-2.19□□□□□ -2.76
HTTP42858 RNU6-1088P-201ENST00000516850 104 ntBASIC-2.19□□□□□ -2.76
HTTP42858 AL050303.3-201ENST00000613704 284 ntBASIC-2.19□□□□□ -2.76
HTTP42858 Y_RNA.359-201ENST00000365498 102 ntBASIC-2.19□□□□□ -2.76
HTTP42858 SNORD58A-201ENST00000383875 65 ntBASIC-2.19□□□□□ -2.76
HTTP42858 MIR577-201ENST00000385196 96 ntBASIC-2.19□□□□□ -2.76
HTTP42858 NBR2-204ENST00000587322 63 ntBASIC-2.19□□□□□ -2.76
HTTP42858 DLEU2_2.2-201ENST00000615474 90 ntBASIC-2.19□□□□□ -2.76
HTTP42858 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.2□□□□□ -2.76
HTTP42858 snoU2_19.4-201ENST00000364329 80 ntBASIC-2.2□□□□□ -2.76
HTTP42858 RNU6-662P-201ENST00000384253 104 ntBASIC-2.2□□□□□ -2.76
HTTP42858 RNU6-510P-201ENST00000391239 108 ntBASIC-2.2□□□□□ -2.76
HTTP42858 SNORD2.1-201ENST00000458762 69 ntBASIC-2.2□□□□□ -2.76
HTTP42858 RNU6-810P-201ENST00000364001 107 ntBASIC-2.2□□□□□ -2.76
HTTP42858 Y_RNA.201-201ENST00000364052 96 ntBASIC-2.2□□□□□ -2.76
HTTP42858 RNU6-665P-201ENST00000384639 107 ntBASIC-2.2□□□□□ -2.76
HTTP42858 MIR125B1-201ENST00000385236 88 ntBASIC-2.2□□□□□ -2.76
HTTP42858 RNU6-644P-201ENST00000391155 98 ntBASIC-2.2□□□□□ -2.76
HTTP42858 AL450471.1-201ENST00000447509 127 ntBASIC-2.2□□□□□ -2.76
HTTP42858 RNU6-508P-201ENST00000363231 103 ntBASIC-2.2□□□□□ -2.76
HTTP42858 Y_RNA.314-201ENST00000365114 102 ntBASIC-2.2□□□□□ -2.76
HTTP42858 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.21□□□□□ -2.76
HTTP42858 Y_RNA.560-201ENST00000384689 102 ntBASIC-2.21□□□□□ -2.76
HTTP42858 SNORD115-46-201ENST00000390982 71 ntBASIC-2.21□□□□□ -2.76
HTTP42858 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-2.21□□□□□ -2.76
HTTP42858 RNU6-68P-201ENST00000516576 104 ntBASIC-2.21□□□□□ -2.76
HTTP42858 AL359920.1-201ENST00000618332 176 ntBASIC-2.21□□□□□ -2.76
HTTP42858 MIR1321-201ENST00000637766 79 ntBASIC-2.21□□□□□ -2.76
HTTP42858 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.21□□□□□ -2.76
HTTP42858 RNU6-906P-201ENST00000384700 70 ntBASIC-2.21□□□□□ -2.76
HTTP42858 MIR122-201ENST00000385044 85 ntBASIC-2.21□□□□□ -2.76
HTTP42858 RNU6-300P-201ENST00000459080 104 ntBASIC-2.21□□□□□ -2.76
HTTP42858 RNU4-11P-201ENST00000365287 132 ntBASIC-2.22□□□□□ -2.76
HTTP42858 RNU6-264P-201ENST00000517134 104 ntBASIC-2.22□□□□□ -2.76
HTTP42858 DLEU2_1.2-201ENST00000614667 120 ntBASIC-2.22□□□□□ -2.76
HTTP42858 Y_RNA.530-201ENST00000384587 101 ntBASIC-2.22□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 294.6 ms