Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.48□□□□□ -2.65
MDH1P40925 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.49□□□□□ -2.65
MDH1P40925 RNU6-200P-201ENST00000364743 107 ntBASIC-1.49□□□□□ -2.65
MDH1P40925 MIR577-201ENST00000385196 96 ntBASIC-1.49□□□□□ -2.65
MDH1P40925 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.49□□□□□ -2.65
MDH1P40925 AL445584.3-201ENST00000617173 78 ntBASIC-1.49□□□□□ -2.65
MDH1P40925 SNORA63.2-201ENST00000362603 126 ntBASIC-1.5□□□□□ -2.65
MDH1P40925 SNORD58C-201ENST00000365223 64 ntBASIC-1.5□□□□□ -2.65
MDH1P40925 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.5□□□□□ -2.65
MDH1P40925 RNU6-10P-201ENST00000384036 107 ntBASIC-1.5□□□□□ -2.65
MDH1P40925 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.5□□□□□ -2.65
MDH1P40925 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.5□□□□□ -2.65
MDH1P40925 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.51□□□□□ -2.65
MDH1P40925 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.52□□□□□ -2.65
MDH1P40925 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.52□□□□□ -2.65
MDH1P40925 SNORA24B-201ENST00000384176 131 ntBASIC-1.52□□□□□ -2.65
MDH1P40925 RNU7-134P-201ENST00000458997 64 ntBASIC-1.52□□□□□ -2.65
MDH1P40925 AL513043.2-201ENST00000573941 143 ntBASIC-1.52□□□□□ -2.65
MDH1P40925 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.52□□□□□ -2.65
MDH1P40925 MIR4439-201ENST00000583746 80 ntBASIC-1.52□□□□□ -2.65
MDH1P40925 RNU6-832P-201ENST00000363319 107 ntBASIC-1.53□□□□□ -2.65
MDH1P40925 RNU6-746P-201ENST00000384112 109 ntBASIC-1.54□□□□□ -2.66
MDH1P40925 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.54□□□□□ -2.66
MDH1P40925 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.54□□□□□ -2.66
MDH1P40925 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.54□□□□□ -2.66
MDH1P40925 RNU6-394P-201ENST00000410735 107 ntBASIC-1.54□□□□□ -2.66
MDH1P40925 MIR3064-201ENST00000581130 66 ntBASIC-1.54□□□□□ -2.66
MDH1P40925 RNY3P2-201ENST00000362918 102 ntBASIC-1.55□□□□□ -2.66
MDH1P40925 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.55□□□□□ -2.66
MDH1P40925 SNORD75.2-201ENST00000408784 58 ntBASIC-1.55□□□□□ -2.66
MDH1P40925 RNA5SP147-201ENST00000516493 109 ntBASIC-1.55□□□□□ -2.66
MDH1P40925 MIR4306-201ENST00000583390 91 ntBASIC-1.55□□□□□ -2.66
MDH1P40925 RNU6-694P-201ENST00000364071 147 ntBASIC-1.56□□□□□ -2.66
MDH1P40925 MIR548A1-201ENST00000385041 97 ntBASIC-1.56□□□□□ -2.66
MDH1P40925 SNORD90-201ENST00000391145 111 ntBASIC-1.56□□□□□ -2.66
MDH1P40925 SNORD45B-201ENST00000364617 72 ntBASIC-1.57□□□□□ -2.66
MDH1P40925 SNORA33.1-201ENST00000364957 130 ntBASIC-1.57□□□□□ -2.66
MDH1P40925 RNU6-574P-201ENST00000384265 107 ntBASIC-1.57□□□□□ -2.66
MDH1P40925 MIR1255B2-201ENST00000408618 67 ntBASIC-1.57□□□□□ -2.66
MDH1P40925 snoU13.17-201ENST00000458802 104 ntBASIC-1.57□□□□□ -2.66
MDH1P40925 RNU7-24P-201ENST00000458867 62 ntBASIC-1.57□□□□□ -2.66
MDH1P40925 SNORD63.1-201ENST00000516178 80 ntBASIC-1.57□□□□□ -2.66
MDH1P40925 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.57□□□□□ -2.66
MDH1P40925 MIR4679-2-201ENST00000578358 77 ntBASIC-1.57□□□□□ -2.66
MDH1P40925 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.58□□□□□ -2.66
MDH1P40925 MIR203A-201ENST00000384836 110 ntBASIC-1.58□□□□□ -2.66
MDH1P40925 RNU6-644P-201ENST00000391155 98 ntBASIC-1.58□□□□□ -2.66
MDH1P40925 MIR3165-201ENST00000579874 75 ntBASIC-1.58□□□□□ -2.66
MDH1P40925 AC104996.3-201ENST00000590718 94 ntBASIC-1.58□□□□□ -2.66
MDH1P40925 AC004792.1-201ENST00000614523 137 ntBASIC-1.58□□□□□ -2.66
MDH1P40925 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.59□□□□□ -2.66
MDH1P40925 RNA5SP192-201ENST00000364404 120 ntBASIC-1.59□□□□□ -2.66
MDH1P40925 RNU6-463P-201ENST00000384340 107 ntBASIC-1.59□□□□□ -2.66
MDH1P40925 MIR569-201ENST00000385228 96 ntBASIC-1.59□□□□□ -2.66
MDH1P40925 RNA5SP266-201ENST00000410273 108 ntBASIC-1.59□□□□□ -2.66
MDH1P40925 RNU2-51P-201ENST00000410708 197 ntBASIC-1.59□□□□□ -2.66
MDH1P40925 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.6□□□□□ -2.67
MDH1P40925 RNU6-382P-201ENST00000365181 106 ntBASIC-1.6□□□□□ -2.67
MDH1P40925 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.6□□□□□ -2.67
MDH1P40925 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.6□□□□□ -2.67
MDH1P40925 RNU6-479P-201ENST00000516348 105 ntBASIC-1.6□□□□□ -2.67
MDH1P40925 AC132825.6-201ENST00000638861 357 ntBASIC-1.6□□□□□ -2.67
MDH1P40925 RNA5SP292-201ENST00000390974 118 ntBASIC-1.61□□□□□ -2.67
MDH1P40925 MIR8485-201ENST00000401372 91 ntBASIC-1.61□□□□□ -2.67
MDH1P40925 SNORD57-201ENST00000448188 72 ntBASIC-1.61□□□□□ -2.67
MDH1P40925 MIR3144-201ENST00000579460 79 ntBASIC-1.61□□□□□ -2.67
MDH1P40925 MIR3613-201ENST00000579844 87 ntBASIC-1.61□□□□□ -2.67
MDH1P40925 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.62□□□□□ -2.67
MDH1P40925 RNU6-260P-201ENST00000384092 107 ntBASIC-1.62□□□□□ -2.67
MDH1P40925 RNU6-804P-201ENST00000384286 107 ntBASIC-1.62□□□□□ -2.67
MDH1P40925 SNORA26.4-201ENST00000391188 123 ntBASIC-1.62□□□□□ -2.67
MDH1P40925 MIR3115-201ENST00000577915 68 ntBASIC-1.62□□□□□ -2.67
MDH1P40925 MIR548Z-201ENST00000584743 97 ntBASIC-1.62□□□□□ -2.67
MDH1P40925 RNU6-924P-201ENST00000362926 108 ntBASIC-1.63□□□□□ -2.67
MDH1P40925 RNU6-379P-201ENST00000363813 104 ntBASIC-1.63□□□□□ -2.67
MDH1P40925 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.63□□□□□ -2.67
MDH1P40925 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.63□□□□□ -2.67
MDH1P40925 RNU6-813P-201ENST00000384691 107 ntBASIC-1.63□□□□□ -2.67
MDH1P40925 SNORD4B-201ENST00000459083 72 ntBASIC-1.63□□□□□ -2.67
MDH1P40925 CYP3A54P-201ENST00000566950 75 ntBASIC-1.63□□□□□ -2.67
MDH1P40925 MIR6818-201ENST00000621576 65 ntBASIC-1.63□□□□□ -2.67
MDH1P40925 SNORD115-22-201ENST00000364456 82 ntBASIC-1.64□□□□□ -2.67
MDH1P40925 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.64□□□□□ -2.67
MDH1P40925 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.65□□□□□ -2.67
MDH1P40925 SNORD115-33-201ENST00000363723 82 ntBASIC-1.65□□□□□ -2.67
MDH1P40925 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.65□□□□□ -2.67
MDH1P40925 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.65□□□□□ -2.67
MDH1P40925 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.65□□□□□ -2.67
MDH1P40925 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.65□□□□□ -2.67
MDH1P40925 RNU6-519P-201ENST00000410590 108 ntBASIC-1.65□□□□□ -2.67
MDH1P40925 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.65□□□□□ -2.67
MDH1P40925 RNU6-62P-201ENST00000516526 102 ntBASIC-1.65□□□□□ -2.67
MDH1P40925 AC006254.2-201ENST00000603259 279 ntBASIC-1.65□□□□□ -2.67
MDH1P40925 AC103810.7-201ENST00000607821 91 ntBASIC-1.65□□□□□ -2.67
MDH1P40925 AL035470.1-201ENST00000622571 220 ntBASIC-1.65□□□□□ -2.67
MDH1P40925 MIR4773-1-201ENST00000637203 78 ntBASIC-1.65□□□□□ -2.67
MDH1P40925 AL157777.2-201ENST00000258070 137 ntBASIC-1.66□□□□□ -2.68
MDH1P40925 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.66□□□□□ -2.68
MDH1P40925 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.66□□□□□ -2.68
MDH1P40925 MIR29B1-201ENST00000385015 81 ntBASIC-1.66□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 202.1 ms